Gene

KWMTBOMO00644

Pre Gene Modal

BGIBMGA003864

Annotation

os_protein_[Bombyx_mori]

Location

Bomo_Chr1(+):20004425-20024276      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.974

CDS

ATGTCGAAGAACGGTTTAGAGGAACCAAGCGGCAGTCAGCCGACGCCGAAGGAGACTACGCCGCTCATTACAAAGGGTGGCGAAAATGGCAACGGTGGTGGTAAGAACGGCGGACTCAGCGTTGGGCAGACGAGTATGTTGATCGCCGGAGAGATGGCAGGCAGCGGAGTCTTGGCTCTCCCTAGAGCCCTTGTCAGGACTGGATGGATTGGTGTTCCCATTATCATTCTGATGTGCTTGGTGGCGGCCTTCAGTGGCAAGCGACTCGGTGACTGCTGGACCATTCTGGAGGAACGCAATCCTCAACTGAGGAGCAGGAAGAGGAACCCATACGCTATTATTGCTGATCAAACTCTCGGCAAGACCTGGAGCGTGGTCGTGTCCATGGCGATCATTGTAACCCTCTTTGGAGCTTCGGTCGTGTACCTGCTGATGGCAGCTCAGATCATCGAACAACTCCTACTCACTCTGATCCCAACATTGACCATTTGCACTTGGTACCTGATCGTGGTCGGAGCCATGACTCCTCTTATCTTCTTTAACAGCCCTAAGGATCTGACCTTCACTGGTGTAATCGCCTTCGGATCCACGGTGATTGCCTGCATCTTGTACTTTATTGAGATGATGAACGAAGTCCGTCCTTTCGTGTTTCGTTGGGGTGTCCACGGCTTTACGGATTTCTTCCTTGCTTTCGGCACCATCATGTTTGCGTTTGGGGGTGCCTCAACCTTTCCAACCATCCAGAACGACATGACCGACAAATCTCAGTTTGGGAAAAGCATTCAGTACAGTTTTGGGGCCATCCTGTTGCTGTACCTACCCATCGCGATCGGAGGCTATGCTGTGTACGGCGAGTCAGTTGGGTCTAACGTGGCCTTATCTCTGTCTGCTACCCCGTTGACCCTGGTCGGAAACATCTTTATGGCCATTCACCTCGTCTTCGCTTTTATCATCTTGATTAACCCGGTCTGCCAGGAAATGGAAGAGATTTACAACATTGAGAGAGATTCCGTGGGCTGGCGTGTCCTGATCCGCCTCTCCATCATGGGCGCCATTTTGTTCATCGGCGAGAGTATTCCTCGTTTCTACACGATCCTCGCGCTGGTCGGAGGCACAACAGTGGCTCTGCTCACTTACATCCTGCCTTCGTTCTGCTACCTGAGCCTCATTAACCAGACGCCTAGAGAGGGGCAGACTCCAATAGAAACTCCTGGCTGGGTGAAATTGCTTTGCTACGAGGTTATTGCCCTCGGGGTCCTTGGGGCCGTGGCCGCAACCTACAGCGGACTAAGCGCCGTGTTCAGCAGCGCCGTCACCACGCCCTGCTACCTACGATAG

Protein

MSKNGLEEPSGSQPTPKETTPLITKGGENGNGGGKNGGLSVGQTSMLIAGEMAGSGVLALPRALVRTGWIGVPIIILMCLVAAFSGKRLGDCWTILEERNPQLRSRKRNPYAIIADQTLGKTWSVVVSMAIIVTLFGASVVYLLMAAQIIEQLLLTLIPTLTICTWYLIVVGAMTPLIFFNSPKDLTFTGVIAFGSTVIACILYFIEMMNEVRPFVFRWGVHGFTDFFLAFGTIMFAFGGASTFPTIQNDMTDKSQFGKSIQYSFGAILLLYLPIAIGGYAVYGESVGSNVALSLSATPLTLVGNIFMAIHLVFAFIILINPVCQEMEEIYNIERDSVGWRVLIRLSIMGAILFIGESIPRFYTILALVGGTTVALLTYILPSFCYLSLINQTPREGQTPIETPGWVKLLCYEVIALGVLGAVAATYSGLSAVFSSAVTTPCYLR

Uniprot

G1UH29   G1UH32   H9J2X7   I4DJH9   I4DM23   A0A212EKD5   + More
A0A2A4JQ93   A0A2W1BI57   G1UH31   A0A194QXQ2   A0A067QJD4   A0A1Y1NHJ2   A0A2J7QU03   A0A2J7QU19   A0A0A9ZCL0   A0A2J7QU12   A0A023F831   A0A1B6HTY9   R4G3L0   T1HU60   A0A1B6GMY9   R4WS75   A0A1B6J618   E0V9U9   A0A1B6MPJ4   A0A1B6EVQ8   C3YUS8   C3YUS7   A0A087T2R7   A0A2C9K492   A0A1S3IZ16   A0A1S3IYH0   A0A1S3KEE1   A0A1S3KF48   T1JJG5   A0A2G8KUZ9   A0A1W3JDY6   A0A2C9K468   A0A1B6DU47   A0A2C9K488   A0A2C9K491   A0A2J7QU04   A0A146LB68   A0A2T7P419   F7A4D7   K1RT88   A0A1W0WSB9   H2Z6U2   B3RRJ6   A0A369RZ19   A0A210QID1   A0A2P2HZS8   A0A0L8IE90   H2Z6U1   A0A2T7P403   A0A2L2Y9K5   A0A2R5LEF6   L7MIU8   L7MGY3   L7MH99   A0A293LGF8   T1KQS4   A0A131XHC8   A0A131YCM8   A0A131YWW9   L7MGQ4   A0A087TTD7   A0A2P2HY10   A0A183UI32   V5H7V7   A0A0P4VZI8   F6VBX7   H2Z6I0   F0J967   A0A158PNA9   A0A3P6RQ62   T1KID8   F6VBN4   T1KJ56   A0A1B6JMD9   A0A182E8I6   A0A044U870   A0A2L2YCV6   F1L368   G3MII0   A0A0N5AWU9   E4XHC6   E4YG51   A0A023GNA8   A0A023GGI8   A0A023GD66   G3MHT0   T1JTR3   A0A2S2NQH5   A0A0N4TQC4  

Pubmed

21619931    19121390    22651552    22118469    28756777    26354079    + More
24845553    28004739    25401762    25474469    23691247    20566863    18563158    15562597    29023486    26823975    12481130    15114417    22992520    18719581    30042472    28812685    26561354    25576852    28049606    26830274    25765539    21362191    22919073    21685128    22216098    21097902   

EMBL

AB606415    BAK64377.1    AB606418    BAK64380.1    BABH01031223    AK401447    + More
BAM18069.1    AK402341    BAM18963.1    AGBW02014274    OWR41944.1    NWSH01000836    PCG73936.1    KZ150031    PZC74732.1    AB606417    BAK64379.1    KQ460953    KPJ10318.1    KK853424    KDR07697.1    GEZM01002091    JAV97373.1    NEVH01011192    PNF32067.1    PNF32065.1    GBHO01001430    GBHO01001428    GBRD01006036    GBRD01000363    JAG42174.1    JAG42176.1    JAG59785.1    PNF32069.1    GBBI01001292    JAC17420.1    GECU01029601    JAS78105.1    GAHY01002115    JAA75395.1    ACPB03000737    GECZ01005961    JAS63808.1    AK417542    BAN20757.1    GECU01013109    JAS94597.1    DS234996    EEB10155.1    GEBQ01002097    JAT37880.1    GECZ01027986    GECZ01011439    JAS41783.1    JAS58330.1    GG666554    EEN55979.1    EEN55978.1    KK113129    KFM59406.1    JH431912    MRZV01000356    PIK51785.1    GEDC01008104    JAS29194.1    PNF32068.1    GDHC01014287    JAQ04342.1    PZQS01000006    PVD28156.1    EAAA01002435    JH818674    EKC37816.1    MTYJ01000053    OQV18096.1    DS985243    EDV26356.1    NOWV01000117    RDD39926.1    NEDP02003514    OWF48500.1    IACF01001590    LAB67282.1    KQ415893    KOF99782.1    PVD28157.1    IAAA01011297    IAAA01011298    LAA04823.1    GGLE01003756    MBY07882.1    GACK01001831    JAA63203.1    GACK01001563    JAA63471.1    GACK01001832    JAA63202.1    GFWV01003093    MAA27823.1    CAEY01000380    GEFH01002779    JAP65802.1    GEDV01012345    JAP76212.1    GEDV01005562    JAP82995.1    GACK01001884    JAA63150.1    KK116647    KFM68376.1    IACF01000750    LAB66506.1    UYWY01019837    VDM39473.1    GANP01011304    JAB73164.1    GDRN01104869    JAI57831.1    BK007418    DAA34377.1    UYRR01031031    VDK44068.1    CAEY01000112    CAEY01000119    GECU01007361    JAT00346.1    UYRW01000963    VDK72647.1    CMVM020000172    IAAA01010513    IAAA01010514    LAA05984.1    JI170479    ADY44572.1    JO841681    AEO33298.1    FN653051    CBY10074.1    FN654511    CBY34475.1    GBBM01000099    JAC35319.1    GBBM01003310    JAC32108.1    GBBM01003312    JAC32106.1    JO841431    AEO33048.1    CAEY01000484    GGMR01006593    MBY19212.1    UZAD01013198    VDN91939.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053240    UP000027135    UP000235965    + More
UP000015103    UP000009046    UP000001554    UP000054359    UP000076420    UP000085678    UP000230750    UP000245119    UP000008144    UP000005408    UP000007875    UP000009022    UP000253843    UP000242188    UP000053454    UP000015104    UP000050794    UP000267007    UP000036680    UP000077448    UP000271087    UP000024404    UP000046393    UP000038020    UP000278627   

PRIDE

G1UH29    G1UH32    H9J2X7    G1UH31    L7MIU8    L7MGY3    + More
L7MH99    L7MGQ4   

Pfam

PF01490   Aa_trans

Interpro

IPR013057   AA_transpt_TM        + More
IPR038271   Pur-cyt_permease_sf       
IPR002293   AA/rel_permease1       

Gene 3D

1.10.4160.10    

ProteinModelPortal

G1UH29   G1UH32   H9J2X7   I4DJH9   I4DM23   A0A212EKD5   + More
A0A2A4JQ93   A0A2W1BI57   G1UH31   A0A194QXQ2   A0A067QJD4   A0A1Y1NHJ2   A0A2J7QU03   A0A2J7QU19   A0A0A9ZCL0   A0A2J7QU12   A0A023F831   A0A1B6HTY9   R4G3L0   T1HU60   A0A1B6GMY9   R4WS75   A0A1B6J618   E0V9U9   A0A1B6MPJ4   A0A1B6EVQ8   C3YUS8   C3YUS7   A0A087T2R7   A0A2C9K492   A0A1S3IZ16   A0A1S3IYH0   A0A1S3KEE1   A0A1S3KF48   T1JJG5   A0A2G8KUZ9   A0A1W3JDY6   A0A2C9K468   A0A1B6DU47   A0A2C9K488   A0A2C9K491   A0A2J7QU04   A0A146LB68   A0A2T7P419   F7A4D7   K1RT88   A0A1W0WSB9   H2Z6U2   B3RRJ6   A0A369RZ19   A0A210QID1   A0A2P2HZS8   A0A0L8IE90   H2Z6U1   A0A2T7P403   A0A2L2Y9K5   A0A2R5LEF6   L7MIU8   L7MGY3   L7MH99   A0A293LGF8   T1KQS4   A0A131XHC8   A0A131YCM8   A0A131YWW9   L7MGQ4   A0A087TTD7   A0A2P2HY10   A0A183UI32   V5H7V7   A0A0P4VZI8   F6VBX7   H2Z6I0   F0J967   A0A158PNA9   A0A3P6RQ62   T1KID8   F6VBN4   T1KJ56   A0A1B6JMD9   A0A182E8I6   A0A044U870   A0A2L2YCV6   F1L368   G3MII0   A0A0N5AWU9   E4XHC6   E4YG51   A0A023GNA8   A0A023GGI8   A0A023GD66   G3MHT0   T1JTR3   A0A2S2NQH5   A0A0N4TQC4  

KEGG

100862785    no KO assigned | (RefSeq) os; os protein

GO

GO:0016021   GO:0003333   GO:0015171   GO:0022857  

Length:

445

Number of predicted TMHs:

10

Exp number of AAs in TMHs:

221.85282

Exp number, first 60 AAs:

1.52825

Total prob of N-in:

0.04856

outside

1  -  62

TMhelix

63  -  85

inside

86  -  124

TMhelix

125  -  147

outside

148  -  156

TMhelix

157  -  179

inside

180  -  185

TMhelix

186  -  208

outside

209  -  222

TMhelix

223  -  245

inside

246  -  264

TMhelix

265  -  287

outside

288  -  301

TMhelix

302  -  324

inside

325  -  336

TMhelix

337  -  356

outside

357  -  365

TMhelix

366  -  388

inside

389  -  408

TMhelix

409  -  431

outside

432  -  445

 

 

Pi

13.424225

Theta

13.724101

Tajima's D

-0.843579

CLR

0.078847

CSRT

0.170241487925604

Interpretation

Uncertain