Gene

KWMTBOMO00642

Pre Gene Modal

BGIBMGA003863

Annotation

neuropeptide_receptor_A18_[Bombyx_mori]

Location

Bomo_Chr1(+):19896485-19910424      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.369

CDS

ATGAGCTCGTGGCTCGTGGTCGCCTTTACGGTAGAACGTTTCGTCGCGGTGCTGTACCCGCTCCGACGCAATGCTCTGTGCACGGTCACTCGCGCCCGTCACATTATCTTCACTGTTCTCTTGGCGTCATCGCTCATCAACCTGCCGGTGCTGCGGTTCGCGGTTCCCTCGAAAAATGATTGCAACATAGATTTCGAGTACTTAGACCAGGCGGCGCGGTTCAACCTTGTCGATACGGCGCTGTCGTTTTCTGTACCCCTATTTTTAATCACAATATTGAACACATGGATAATGATCGGCGTGTGGAAGCTCGAGCGGCAACGGCGTCAGATCATGAAGGAGGAGATGGAGAGGGCCCGCGCGCGACCGTATCGCACCACGGGGTGCCCGCGCTCTCAGCACCGAGTCACCCGCATGCTTCTCATCGTGTCGTCGGTGTTCGTCGTGCTCAACCTGCCCGCCTACACGATGCGAATCTTGGCCTATGCATATAATATGAACGAAGAAGAGTACAGCGGTCGGTGGGCGGCGGTTCAGCAGCTGAGCTTACTGTTCTTCAACACCAACTTCGGTATCAACTTCATGTTGTATTGCTTGAGCGGGCAAAACTTTCGTCGTGCGGTGCAGCAAACACTACCGTGCCTGAGGAAGCGTGCGGACCATCGGGCGGCGCGGCGAGCCACGCAGACCAGACCGGGCAGTGGATCAACTTTGGAAGCTTGCATGTCAGCCAACTCGCCTCAGGATGTAGGTCGCAGCTTGCATATTAGGCTGCAGTACTTAGCGTGA

Protein

MSSWLVVAFTVERFVAVLYPLRRNALCTVTRARHIIFTVLLASSLINLPVLRFAVPSKNDCNIDFEYLDQAARFNLVDTALSFSVPLFLITILNTWIMIGVWKLERQRRQIMKEEMERARARPYRTTGCPRSQHRVTRMLLIVSSVFVVLNLPAYTMRILAYAYNMNEEEYSGRWAAVQQLSLLFFNTNFGINFMLYCLSGQNFRRAVQQTLPCLRKRADHRAARRATQTRPGSGSTLEACMSANSPQDVGRSLHIRLQYLA

Similarity

Belongs to the G-protein coupled receptor 1 family.

Uniprot

B3XXN1   A0A0S1YD85   A0A2H1WRH5   A0A194PLR6   A0A194QYD8   A0A0L7KYL2   + More
Q5TS06   A0A182LRX4   A0A182T6M6   A0A182V0M3   Q5TS07   A0A182KNK6   A0A182HQQ3   A0A182PBB5   A0A182XJG4   A0A182N1U9   A0A182QYX4   A0A182WM51   A0A182REQ3   A0A084WDV3   A0A154P9B7   A0A151WWC3   A0A1S4G7J8   A0A182FLD6   E1ZZX2   U3UA03   A0A2J7QU05   A0A1W4XSI4   A0A1W4XGY9   A0A151J1T8   A0A151JY56   A0A232EXY5   A0A0L7QZ99   A0A084WDV4   A0A195AUQ3   A0A182MMV3   A0A182VNS1   A0A182TI30   A0A182QWF3   A0A2U9PFU6   A0A182YLH7   A0A336LWA2   A0A0C9RGF4   A0A0P4VL41   A0A1B6D8L9   A0A1B6HXZ5   A0A1B6H5F3   A0A2H8TVE3   A0A1B6M6Q8   Q2HPE8   A0A2S2PVG0   J9K5A6   A0A3B0JA93   B4KVU5   A0A3L8DCK3   B4LHR1   B4IY97   B3MAQ0   A0A0J9RST2   Q7Q7V7   A0A232F1Y8   A0A1W4XH88   A0A1W4X6Z8   W5JGI6   A0A1S3JEI1   A0A182JCT0   A0A1S3IQW9   A0A210R6K8   A0A0K0PUI3   R7TJX3   V4BQW3   A0A2C9JJS1   K1Q9T6   A0A183J7C5   A0A1S3H804  

Pubmed

18725956    26354079    26227816    12364791    14747013    17210077    + More
20966253    24438588    20798317    23932938    28648823    25244985    27129103    17994087    18057021    30249741    22936249    20920257    23761445    28812685    26190115    23254933    15562597    22992520   

EMBL

AB330439    BAG68417.1    KT031016    ALM88314.1    ODYU01010138    SOQ55034.1    + More
KQ459605    KPI92050.1    KQ460953    KPJ10314.1    JTDY01004300    KOB68312.1    AAAB01008948    EAL40211.3    AXCM01001266    AY391746    AAR28996.1    EAL40210.3    APCN01004677    AXCN02000971    ATLV01023073    KE525340    KFB48397.1    KQ434846    KZC08431.1    KQ982691    KYQ52138.1    GL435530    EFN73283.1    AB817301    BAO01068.1    NEVH01011192    PNF32072.1    KQ980514    KYN15753.1    KQ981515    KYN40777.1    NNAY01001718    OXU23139.1    KQ414683    KOC63881.1    KFB48398.1    KQ976738    KYM75750.1    MG550207    AWT50641.1    UFQT01000244    SSX22336.1    GBYB01012197    JAG81964.1    GDKW01003521    JAI53074.1    GEDC01015373    JAS21925.1    GECU01033804    GECU01028191    GECU01022854    JAS73902.1    JAS79515.1    JAS84852.1    GECU01037785    JAS69921.1    GFXV01006094    MBW17899.1    GEBQ01008372    JAT31605.1    AY391745    AAR28995.1    EDO63995.1    GGMS01000303    MBY69506.1    ABLF02029087    OUUW01000002    SPP77343.1    CH933809    EDW18469.1    KRG06199.1    QOIP01000009    RLU18240.1    CH940647    EDW69614.2    CH916366    EDV96547.1    CH902618    EDV39134.2    CM002912    KMY98717.1    EAA10464.2    NNAY01001204    OXU24751.1    ADMH02001573    ETN62025.1    NEDP02000155    OWF56564.1    KP293995    AKQ63049.1    AMQN01002580    KB309617    ELT93787.1    KB202283    ESO91304.1    JH816736    EKC25570.1    UZAM01016357    VDP42847.1   

Proteomes

UP000053268    UP000053240    UP000037510    UP000007062    UP000075883    UP000075901    + More
UP000075903    UP000075882    UP000075840    UP000075885    UP000076407    UP000075884    UP000075886    UP000075920    UP000075900    UP000030765    UP000076502    UP000075809    UP000069272    UP000000311    UP000235965    UP000192223    UP000078492    UP000078541    UP000215335    UP000053825    UP000078540    UP000075902    UP000076408    UP000007819    UP000268350    UP000009192    UP000279307    UP000008792    UP000001070    UP000007801    UP000000673    UP000085678    UP000075880    UP000242188    UP000014760    UP000030746    UP000076420    UP000005408    UP000050793   

PRIDE

B3XXN1   

Pfam

PF00001   7tm_1

Interpro

IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       

ProteinModelPortal

B3XXN1   A0A0S1YD85   A0A2H1WRH5   A0A194PLR6   A0A194QYD8   A0A0L7KYL2   + More
Q5TS06   A0A182LRX4   A0A182T6M6   A0A182V0M3   Q5TS07   A0A182KNK6   A0A182HQQ3   A0A182PBB5   A0A182XJG4   A0A182N1U9   A0A182QYX4   A0A182WM51   A0A182REQ3   A0A084WDV3   A0A154P9B7   A0A151WWC3   A0A1S4G7J8   A0A182FLD6   E1ZZX2   U3UA03   A0A2J7QU05   A0A1W4XSI4   A0A1W4XGY9   A0A151J1T8   A0A151JY56   A0A232EXY5   A0A0L7QZ99   A0A084WDV4   A0A195AUQ3   A0A182MMV3   A0A182VNS1   A0A182TI30   A0A182QWF3   A0A2U9PFU6   A0A182YLH7   A0A336LWA2   A0A0C9RGF4   A0A0P4VL41   A0A1B6D8L9   A0A1B6HXZ5   A0A1B6H5F3   A0A2H8TVE3   A0A1B6M6Q8   Q2HPE8   A0A2S2PVG0   J9K5A6   A0A3B0JA93   B4KVU5   A0A3L8DCK3   B4LHR1   B4IY97   B3MAQ0   A0A0J9RST2   Q7Q7V7   A0A232F1Y8   A0A1W4XH88   A0A1W4X6Z8   W5JGI6   A0A1S3JEI1   A0A182JCT0   A0A1S3IQW9   A0A210R6K8   A0A0K0PUI3   R7TJX3   V4BQW3   A0A2C9JJS1   K1Q9T6   A0A183J7C5   A0A1S3H804  

PDB

4XEE     E-value=2.4842e-08,     Score=138

KEGG

100174929    no KO assigned | (RefSeq) NGR-A18, BNGR-A18; neuropeptide receptor A18

GO

GO:0007218   GO:0004930   GO:0016021   GO:0008188   GO:0007186   GO:0005216   GO:0006355   GO:0043565   GO:0003677   GO:0003707   GO:0004887  

Length:

262

Number of predicted TMHs:

5

Exp number of AAs in TMHs:

104.62688

Exp number, first 60 AAs:

37.33416

Total prob of N-in:

0.16636

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  21

inside

22  -  33

TMhelix

34  -  56

outside

57  -  79

TMhelix

80  -  102

inside

103  -  139

TMhelix

140  -  162

outside

163  -  176

TMhelix

177  -  199

inside

200  -  262

 

 

Pi

17.663333

Theta

16.160363

Tajima's D

0.081424

CLR

0

CSRT

0.40197990100495

Interpretation

Possibly Positive selection