Pre Gene Modal
BGIBMGA003891
Annotation
PREDICTED:_transcription_initiation_factor_TFIID_subunit_4_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.802
Sequence
CDS
ATGCAACCTCCTTTAGTTTTAAAACAGGGGACGTCTTCGGGCCAAGTGGGAATACAGTCTGGAATGGTCACAGTACCGATGACAGCCAATTCAAGCATGTCCGGTTCAATACCAAATGTAATGACTTTGAACAAACCTGGACAAAATGTAGTTGTAACAACTCAGAACTTGGGTTCGAGTCAGCCCACAATACTCCCTAATGTTCAGATTCTGAATATGAGAGCTGGTGCTCCAGCAGTTGCGGCACAAAAGTCAGTAGCAACAGTATCACCAAGAGTAGTGATAGGCACCCCACAAGTTGTTGGCACCAGAGCTGCAGGACCAGGCATAACGCTGCAAACACTACCAAGTCTACAACCGGGCCAGCAGGGTCATTTGTTGTTAAAGACAGAGAATGGTCAATACCAGTTGCTGAGAGTGGGTCCCGCTCCAGCGGCCAGCTCTCTCACGACGCCCCAGCCTCAAACCATCAGGCTGTCCACTGTGCCAGCACATCCTGGCGTCGCGACGGTGTCAACAAGCATGGCCTCCAGCCCTATACCGGGTCAGATGCCAGCTGCGCCGATGGCAACGCCTGTTATACCAGCATCTATACCAAATATAAACTGCGGTACGCCTCCGCCTCAATCTCAACCCCCAACGGTAACAACTGTTAAACCTTCGGACAACACTAAGGAAAAATGCCGTAATTTCTTAGCAAATCTCCTGGACTTATCAAGCAAAGAGCCTCCATCAGTGGAGATGAATGTACGGAATCTGATCCAGGAACTTATCGACGCCCAAGTTGAACCAGAAGAGTTCTGCAACAGACTTGAAAGATTACTTAACGCGAGTCCTCAGCCCTGCCTTATCGGATTCTTAAAGAAAAGCTTGCCACTGCTCAGACAATCTTTGGTTACAAAAGAGCTTGTTATTGAAGGAATAAACCCTCCAGCGCCTCACATAGCTTTCTCTACGATGCCATCTCCCGCCCAACCTGTGGTGGCCACGTCCAACATACAATTGCCTTCAGAGGAAGATGGGTCGAGTCCCACGCTAACGCCTCTCCTGCCGCCGGTAATGCCGCTCACGCTGGCCAACCTGACAAAGCCTATTAACGTTCAGTCACTGCAGACGACAGCTCCCACACAGCAGCAAAAACCACCATCGAAACCGGGCAGTACGATAGCGGTTCTACAGAACATTCCTGTGCACACCAAGATCAACGTTAGCAAAGTCAGTAGCGGCAAGTCGATGCAGTTGAACAACAAGGGCGCCTTCCCGAGAGGCCAATTGCCTTCAGCTGCTTTATCAACCGTACTGACTCCTGGCAAGTCGCTTCTGAAAGATAAGGAGAAGAAATCTTCTAGTTATTCGCAACCGTTCACCGACGACAAGATGGCTGGCGATGACGACATCAATGACGTAGCGGCCATGGGTGGAGTCAACTTGGCGGAGGAGTCGCAGAGGATTCTCGGCTCCACGGAGATGATCGGAACTCAGATTAGATCGTGCAAAGATGAATATTTAGTGCCGACGAGCGTGATGCAAGCCAGGGTTAAAGCCATAATAGCACGACACAATCTCGACGAGCCGACGGGGGAAGTGGCAGCCCTCATCAGTCATGCAGTACAGGAGAGACTTAAAAATCTTATCGAGAAACTAGCTGTGATAGCTCAGCACAGAATCGATCATTTTATAAAGTCTGATAGCCGTTATGAAGTGACTCAAGATGTAAAGGGCCAACTTAAGTTTCTAGAAGAATTGGACCGGGTCGACAAGAAACGCAGGGAAGACTCAGAGAGGGAAATGCTTCTTAGGGCTGCCAAGTCTCGATCGAAGAACGAGGATCCCGAACAGGCGAAATTGAAGGCTAAGGCGAAAGAAATGCAACGTGCCGAGTTGGAGGAGCTTCGTCAAAGGGAAGCCAACTTGACCGCTTTACAAGCTATTGGACCGCGAAAGAAACCAAGACTAGAAGCACCAGGCGCCTCCGGAGACACAGCCACTCCTGGACCGCAGACTACTGGATTTCCTGGCCGAAGTCAACTAGCCCTCCGGACTCGTCTGAAGCGCATCAATCACCGTGACATGCTATTCCTGCTCGAGCAAGAGAGAGACACCTGCCGATCGTTGTTGCTTTACAAGAGCTACTTGAAGTGA
Protein
MQPPLVLKQGTSSGQVGIQSGMVTVPMTANSSMSGSIPNVMTLNKPGQNVVVTTQNLGSSQPTILPNVQILNMRAGAPAVAAQKSVATVSPRVVIGTPQVVGTRAAGPGITLQTLPSLQPGQQGHLLLKTENGQYQLLRVGPAPAASSLTTPQPQTIRLSTVPAHPGVATVSTSMASSPIPGQMPAAPMATPVIPASIPNINCGTPPPQSQPPTVTTVKPSDNTKEKCRNFLANLLDLSSKEPPSVEMNVRNLIQELIDAQVEPEEFCNRLERLLNASPQPCLIGFLKKSLPLLRQSLVTKELVIEGINPPAPHIAFSTMPSPAQPVVATSNIQLPSEEDGSSPTLTPLLPPVMPLTLANLTKPINVQSLQTTAPTQQQKPPSKPGSTIAVLQNIPVHTKINVSKVSSGKSMQLNNKGAFPRGQLPSAALSTVLTPGKSLLKDKEKKSSSYSQPFTDDKMAGDDDINDVAAMGGVNLAEESQRILGSTEMIGTQIRSCKDEYLVPTSVMQARVKAIIARHNLDEPTGEVAALISHAVQERLKNLIEKLAVIAQHRIDHFIKSDSRYEVTQDVKGQLKFLEELDRVDKKRREDSEREMLLRAAKSRSKNEDPEQAKLKAKAKEMQRAELEELRQREANLTALQAIGPRKKPRLEAPGASGDTATPGPQTTGFPGRSQLALRTRLKRINHRDMLFLLEQERDTCRSLLLYKSYLK
Summary
Uniprot
EMBL
Proteomes
PRIDE
Interpro
Gene 3D
CDD
ProteinModelPortal
PDB
6MZL
E-value=1.49228e-50,
Score=507
Ontologies
GO
Topology
Length:
713
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00483999999999998
Exp number, first 60 AAs:
0.00424
Total prob of N-in:
0.00026
outside
1 - 713
Population Genetic Test Statistics
Pi
23.013491
Theta
23.073282
Tajima's D
0.169134
CLR
0.029793
CSRT
0.421728913554322
Interpretation
Uncertain
