SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00633
Pre Gene Modal
BGIBMGA003861
Annotation
PREDICTED:_nitrogen_permease_regulator_2-like_protein_isoform_X1_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.872
 

Sequence

CDS
ATGGAAATCCCGACTTTACTATGTTCCTGGGAATGGCATCCAACTCTGTCAGACGTCCTGGAGATACTGTGTTCGCTGCAACAAGGTACAACCCTGAGGACTGTCAGCGACCGCTTCTCCAACTCTGCTCGACCCAACTTCGACATCAGACGACTGGTTGTCTTCGCTCAGATCCACGGCCTCATCAAATGCTTAAAAAGGTATCCAGTATATCTTCGAAATCCTCCTCGGCATAACGGTTTCAACACCCGCGTAGACCCCGTTCTCGGCATACGCAGACTGTTCACTGGCAAACATTGCGCCGATGAAATCTGCTGTCTCGCTCGCATCGACCTCCCGACCCTCGAGCAAATCATTGAAGAAGACCCGAACGTCGCTATTATATGGAGATAG
Protein
MEIPTLLCSWEWHPTLSDVLEILCSLQQGTTLRTVSDRFSNSARPNFDIRRLVVFAQIHGLIKCLKRYPVYLRNPPRHNGFNTRVDPVLGIRRLFTGKHCADEICCLARIDLPTLEQIIEEDPNVAIIWR

Summary

EMBL
BABH01031237    ODYU01001172    SOQ37006.1    NWSH01005590    PCG64117.1    PCG64116.1    + More
KZ150373    PZC71129.1    AGBW02013268    OWR43773.1    KQ459605    KPI92048.1    KK852819    KDR15634.1    UFQT01000673    UFQT01000883    SSX26373.1    SSX27834.1    KQ415041    KOC58901.1    GEDC01005438    JAS31860.1    DS473722    EDO27172.1    GEDC01019358    JAS17940.1    GBXI01003415    JAD10877.1    KZ288219    PBC32229.1    NEVH01020852    PNF21147.1    JXJN01000553    JXJN01000554    JXJN01000555    GDHF01027109    JAI25205.1    GAKP01005748    GAKP01005747    JAC53205.1    AADN05000356    AYCK01000398    GBXM01019188    JAH89389.1    GBYX01177475    JAO86808.1    CH940651    EDW65809.1    IACJ01053808    LAA43565.1    BX004829    BX928750    BC122356    BC152088    AAI22357.1    CH933810    EDW06753.1    GCES01153440    JAQ32882.1    CP026248    AWP02639.1    CP012528    ALC48269.1    ADON01110048    JARO02005441    KPP66782.1    CH964239    EDW82469.1    KQ763450    OAD55051.1    QUSF01000740    RLV76298.1    MUZQ01000178    OWK56008.1    QRBI01000145    RMC00037.1    LSYS01004144    OPJ80846.1    AWP02637.1    AWP02638.1    KZ511511    PKU32297.1    GCES01147531    GCES01146564    GCES01064367    JAQ38791.1    JAR21956.1    AKCR02000708    PKK16857.1    GAMC01007492    JAB99063.1    AWP02640.1    AXCN02001237    DS469538    EDO45161.1    AGTO01011006    CM000162    EDX02542.1    LSMT01000601    PFX15865.1    CH902640    EDV38325.1    HAEB01013039    HAEC01003256    SBQ59566.1    HADW01008420    SBP09820.1    HAEG01009044    SBR83466.1    HAED01010972    HAEE01015466    SBQ97253.1    CH480832    EDW46200.1    HAEH01012555    HAEI01015755    SBR95082.1    AXCM01004309    CM000366    EDX18151.1    HADZ01018086    HAEA01003704    SBP82027.1   
Pfam
PF06218   NPR2
Interpro
IPR009348   NPR2       
PDB
6CET     E-value=4.78218e-12,     Score=165

Ontologies

Topology

Length:
130
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00866
Exp number, first 60 AAs:
0.00487
Total prob of N-in:
0.06575
outside
1  -  130
 
 

Population Genetic Test Statistics

Pi
5.840346
Theta
5.167931
Tajima's D
0.11455
CLR
0.005575
CSRT
0.424878756062197
Interpretation
Possibly Positive selection
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