Gene

KWMTBOMO00618

Pre Gene Modal

BGIBMGA003852

Annotation

PREDICTED:_uncharacterized_protein_LOC101746464_[Bombyx_mori]

Location

Bomo_Chr1(+):19193269-19208600      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.702

CDS

ATGTCAGAACCCATCATTGTCACCATAGATACCATAGAATGCGTTCTAAGTCTCAATCCTCCTGCACCAAATGAAGAGACCGTACCTCCTGACTCTCCAAGCAGACGAGCGCAAGTCGTAGAAGCACCTCCGGGTTACATGCAAGCATTAGTGCGCCGTATCGTGAGCAACATAAGCCTCCGAATACATCACCTCATCGTGAAATATGTGCAAGATGATATCGTAATGTCACTGAATGTGAAACATCTAGCTGTCGACAGTGCCGACTCGGATTGGGAACCGTCTTTTGCTGATATCGATCAGAACCTGCCCATCATCAGGAGGCTCGTACATCTAGATGACCTAACCCTCTGCCTGGACAGAGCTGATTCTGATGGCAAGATAAGATTCTACCAGGAACCTTTGCTGTATCGATGCCAATTAGAGTTAAGAGTACTGACCCGTTTAGTATCAGCGAATACACGTCGCGCAAGCAGCTTGAGTGTCCAGCTTCGATCAAGTAAACTGGCTTGGGGCGTGACCAGTGACCAACTGACTTTACTCTTGCGATTGATCAGAGAACGATCTGTGGTCAAGGTGCAACCGCAAACCACCAAGATTATCAATATCAACCAACCGCCAGCGCATTTAACGAGCTCAAGTTCATCTGAGCCGGCTCGTACCGAGAGCTGGTCGGAGTGGGCGTGGTCTTGGTTCCCTATGACATCTGATGCTGAGGGTGGAATAGAAGAAGAACGCATGCCTCCGGCACCTACACCTCTTCATTTTAACGCCTATTTCGATGACATATCCCTTGTTTTCAAGGTAATGGAATCGGAGTCAAGTACTCGTAAACGTTCACGTGGCGTGTTAGAGCTGTGCGCTTCACACGGCGCCATCAAGAGCTACGTTTGCAGACCGACTTCGTTCCGGATGCAAATGGCGACGCGCACGTTAACGATCAAATCGTCCGGAAGATGTGTCTGCGGACATCTCGATTACACTATGGGTAAAGACGAGCCTACCGTGTACCTGTGTAAATCGGAGAGCGAGCGCGTCGACAACTGGACCTGGCCCGCGAATGAATTCAGCGGAGGTCACGTGGAGACAGCGGAAGCAGCTCAGGAAACTCCTAAGGACGAGAACCAAAATCCGGAACCGATTATAGACGAGTCGGATCAATCAGGACACTCCACGCCGGAGCCCAAAAATAACATCGACGAAGATGACAAACTGTGGGCACAGATGTCGCCACTGTTGTACGTTAATTACACTCATGAACGATCACCGCCCGACGTTTACGAAAACCCTTATGAACATCCGCCTGAAGATTTTCAATATAGTGATTGGGCAGAAGAAAGCAACCTGAAAATCGAAATTGAATCTTTAGATATCAAACTCAGTACCGGATTGCTGCATAGACTTTCAGCCTTGAAGAACATTTACAAAGAGCTACCGCCAGTTCCCGACGTTGAACTACCAATGCGCGTGCTGACAGTCGAAGAATGCGACGCTCTATTCGACAATCTACCCTTGCGGCGTTTGTCTGTTGAAATGAAAGGGCTCAACGTCCGCGTACACCCTTTCGATCACTCGGCACAGGACCGTACTCCGTCGCACCCGGTCGTTTTGGAAGTCTACATGCCGAGGGGCATCCTGATTGTCAGTGGACCTCTGTATCCTCATAGAGTCTGTTCGGCGGCTTGTCAGATGCCGGATGACGCGGGACCGCTATGGCAAGGGGCACGTGTTCACGTGTCCGCCATTTTGTCCGGTATTGAGGCTAGCATTTGCTCCGTCGACGGGCAGACTCGGCCGTGCGCGAGAACCGATCTCCGCATAGTTGCGCACTCGCTTCAGTACAGAGAATTCTTCACGAAGCGGGAGAGCGTTGTCTTCAGTTATTCAATTAAGATGCGTAAGTAA

Protein

MSEPIIVTIDTIECVLSLNPPAPNEETVPPDSPSRRAQVVEAPPGYMQALVRRIVSNISLRIHHLIVKYVQDDIVMSLNVKHLAVDSADSDWEPSFADIDQNLPIIRRLVHLDDLTLCLDRADSDGKIRFYQEPLLYRCQLELRVLTRLVSANTRRASSLSVQLRSSKLAWGVTSDQLTLLLRLIRERSVVKVQPQTTKIININQPPAHLTSSSSSEPARTESWSEWAWSWFPMTSDAEGGIEEERMPPAPTPLHFNAYFDDISLVFKVMESESSTRKRSRGVLELCASHGAIKSYVCRPTSFRMQMATRTLTIKSSGRCVCGHLDYTMGKDEPTVYLCKSESERVDNWTWPANEFSGGHVETAEAAQETPKDENQNPEPIIDESDQSGHSTPEPKNNIDEDDKLWAQMSPLLYVNYTHERSPPDVYENPYEHPPEDFQYSDWAEESNLKIEIESLDIKLSTGLLHRLSALKNIYKELPPVPDVELPMRVLTVEECDALFDNLPLRRLSVEMKGLNVRVHPFDHSAQDRTPSHPVVLEVYMPRGILIVSGPLYPHRVCSAACQMPDDAGPLWQGARVHVSAILSGIEASICSVDGQTRPCARTDLRIVAHSLQYREFFTKRESVVFSYSIKMRK

Uniprot

H9J2W5   A0A212EGN6   A0A2A4JQH4   A0A2A4JQ03   A0A194PLL2   A0A194QL96   + More
A0A158NQI3   A0A182J7D6   A0A0M9ABX8   A0A1Y1JZC7   A0A182Q1H4   A0A182P8W4   A0A182KX82   A0A182HJY7   A0A182FKZ1   A0A182WW13   Q7QH31   A0A151IUV9   A0A195FGP8   A0A182MEU4   A0A182NL10   A0A182UW75   A0A182JVY1   A0A151WEG8   A0A154P9M1   A0A0C9QMT7   A0A182U8R3   A0A182R877   A0A182VS60   A0A0J7KZS0   A0A151IDA6   A0A088ADA9   A0A0L7RJC9   A0A182YLN0   B0WZW5   U4UBA7   N6UX27   A0A067RGP1   A0A3L8DZI2   E2BJX3   A0A026W8L7   Q16SU8   N6UWR0   D6X2R8   W5J3V5   A0A195BDS5   A0A139WBB9   A0A232EXR6   A0A1J1J4M2   F4WJK5   A0A131YX57   K7JAY2   A0A310SR06   A0A2S2P3S9   A0A2A3EFC8   A0A0K2T0P4   J9JMF7   A0A3M6U0T9   A0A0P5K9L6   A0A0P6GL47   A0A0P6GPY1   A0A0P5LR64   A0A0P6FAD3   A0A0P5IS95   A0A0P5IN93   A0A0P5SEJ8   A0A0N8C843   A0A0P6HP95   A0A0P5PUH7   A0A0P6C7M5   A0A0P5PJ39   A0A0N8DGM7   A0A164NXP5   A0A2R5L9N5  

Pubmed

19121390    22118469    26354079    21347285    28004739    20966253    + More
12364791    14747013    17210077    25244985    23537049    24845553    30249741    20798317    24508170    17510324    18362917    19820115    20920257    23761445    28648823    21719571    26830274    20075255    30382153   

EMBL

BABH01031270    BABH01031271    BABH01031272    BABH01031273    BABH01031274    BABH01031275    + More
BABH01031276    BABH01031277    AGBW02015068    OWR40641.1    NWSH01000888    PCG73672.1    PCG73674.1    KQ459605    KPI91995.1    KQ461196    KPJ06307.1    ADTU01000400    KQ435706    KOX80133.1    GEZM01099854    JAV53140.1    AXCN02000090    APCN01002223    AAAB01008820    EAA05407.5    KQ980937    KYN11280.1    KQ981606    KYN39551.1    AXCM01000231    AXCM01000232    AXCM01000233    KQ983238    KYQ46225.1    KQ434851    KZC08609.1    GBYB01004819    JAG74586.1    LBMM01001707    KMQ95861.1    KQ977978    KYM98381.1    KQ414581    KOC70975.1    DS232219    EDS37790.1    KB631924    ERL87250.1    APGK01002955    KB735045    ENN83457.1    KK852480    KDR22947.1    QOIP01000002    RLU25817.1    GL448708    EFN83982.1    KK107391    EZA51369.1    CH477665    EAT37541.1    APGK01004030    KB735543    ENN83352.1    KQ971372    EFA10287.2    ADMH02002130    ETN58526.1    KQ976509    KYM82708.1    KYB25206.1    NNAY01001682    OXU23234.1    CVRI01000065    CRL05825.1    GL888184    EGI65621.1    GEDV01006046    JAP82511.1    AAZX01011334    KQ760827    OAD58896.1    GGMR01011522    MBY24141.1    KZ288271    PBC29856.1    HACA01002248    CDW19609.1    ABLF02019741    RCHS01002450    RMX47262.1    GDIQ01213328    JAK38397.1    GDIQ01033043    JAN61694.1    GDIQ01030598    JAN64139.1    GDIQ01168444    JAK83281.1    GDIQ01063281    JAN31456.1    GDIQ01211031    JAK40694.1    GDIQ01211030    JAK40695.1    GDIQ01105516    JAL46210.1    GDIQ01105515    JAL46211.1    GDIQ01016243    JAN78494.1    GDIQ01130108    JAL21618.1    GDIP01019757    JAM83958.1    GDIQ01130109    JAL21617.1    GDIP01035631    JAM68084.1    LRGB01002793    KZS06330.1    GGLE01002088    MBY06214.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000005205    + More
UP000075880    UP000053105    UP000075886    UP000075885    UP000075882    UP000075840    UP000069272    UP000076407    UP000007062    UP000078492    UP000078541    UP000075883    UP000075884    UP000075903    UP000075881    UP000075809    UP000076502    UP000075902    UP000075900    UP000075920    UP000036403    UP000078542    UP000005203    UP000053825    UP000076408    UP000002320    UP000030742    UP000019118    UP000027135    UP000279307    UP000008237    UP000053097    UP000008820    UP000007266    UP000000673    UP000078540    UP000215335    UP000183832    UP000007755    UP000002358    UP000242457    UP000007819    UP000275408    UP000076858   

PRIDE

H9J2W5   

Pfam

PF12624   Chorein_N        + More
PF16909   VPS13_C
PF16908   VPS13
PF06650   SHR-BD

Interpro

IPR031645   VPS13_C        + More
IPR039782   VPS13B       
IPR026854   VPS13_N       
IPR026847   VPS13       
IPR031646   VPS13_N2       
IPR009543   SHR-BD       

ProteinModelPortal

H9J2W5   A0A212EGN6   A0A2A4JQH4   A0A2A4JQ03   A0A194PLL2   A0A194QL96   + More
A0A158NQI3   A0A182J7D6   A0A0M9ABX8   A0A1Y1JZC7   A0A182Q1H4   A0A182P8W4   A0A182KX82   A0A182HJY7   A0A182FKZ1   A0A182WW13   Q7QH31   A0A151IUV9   A0A195FGP8   A0A182MEU4   A0A182NL10   A0A182UW75   A0A182JVY1   A0A151WEG8   A0A154P9M1   A0A0C9QMT7   A0A182U8R3   A0A182R877   A0A182VS60   A0A0J7KZS0   A0A151IDA6   A0A088ADA9   A0A0L7RJC9   A0A182YLN0   B0WZW5   U4UBA7   N6UX27   A0A067RGP1   A0A3L8DZI2   E2BJX3   A0A026W8L7   Q16SU8   N6UWR0   D6X2R8   W5J3V5   A0A195BDS5   A0A139WBB9   A0A232EXR6   A0A1J1J4M2   F4WJK5   A0A131YX57   K7JAY2   A0A310SR06   A0A2S2P3S9   A0A2A3EFC8   A0A0K2T0P4   J9JMF7   A0A3M6U0T9   A0A0P5K9L6   A0A0P6GL47   A0A0P6GPY1   A0A0P5LR64   A0A0P6FAD3   A0A0P5IS95   A0A0P5IN93   A0A0P5SEJ8   A0A0N8C843   A0A0P6HP95   A0A0P5PUH7   A0A0P6C7M5   A0A0P5PJ39   A0A0N8DGM7   A0A164NXP5   A0A2R5L9N5  

KEGG

101746464    K19526 vacuolar protein sorting-associated protein 13B | (RefSeq) uncharacterized LOC101746464

GO

GO:0006623   GO:0045053   GO:0019898   GO:0005623  

PANTHER

PTHR12517   PTHR16166  

Length:

634

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00928

Exp number, first 60 AAs:

0.00011

Total prob of N-in:

0.00059

outside

1  -  634

 

 

Pi

16.911976

Theta

2.361996

Tajima's D

-0.956883

CLR

0.004295

CSRT

0.144792760361982

Interpretation

Uncertain