SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00603
Pre Gene Modal
BGIBMGA012361
Annotation
PREDICTED:_uncharacterized_protein_LOC101746166_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.445
 

Sequence

CDS
ATGGCTCTGCACGATGACGTCGATGGACGCGACCTCCGGCATGAGAGCCCCGGTTACGCGACGGTCGACAAAGTACCCTACACTCCTAGTAAAGGCCTAAGACGGTCTGTTAGTGCTACGCCACCCGTGAGACGCCGTAAGAGCAACAGTTCGGAACGAAAGTATTACACGGTCGGACCTAGCAAAGCGGGTCCCGATCGACCTCCGCGAAAGAAGTCCTCGACTAGCTTAATGACTCTAGGCAGCTACACAAAACGATCGGTCAGCAGTGACATTACTCAGTACGTGGAAATCGATGACGCGTTCGAAATGAACAAGGATCTGAAGTCAGGGGAGATAATTAATAAAATGAAAGATAGACCTCTCCCTCCGCCACCGAGACCGCCGAGAGGATCGAGACGCAAGAAGAAAACGAGAAATTATGGTGAAGGAGATCCTACTACCGAATCGGAAAGGAATGTAGAAGCAGAATTTGATAACCAAGAGGAGATAAAAAAGAATGAAGACATTGTCGAAATAGAAGTTTCCACGCAGACAGATCCTTTACCAGACGACGTCGATTTTGAATTGGACGAAAATCTAGACATTTCTATGTCAAGCTCATTACGAGATATAGTTGATGAAGATTCTTTAATGACCAGAAGCCATCCTAGACTAACAGAGAGCCCACGCACGTCTCGACCTACATCAAGATCAGAAAAATCATTAAAATTTTCCGATCCAAAAATATCTGAATTGTCAAAACCTCATATTGGTCGAACATCACCAACGGTCATTTTGGTCGAAAAACGAGTCTCGAGTCCTACCAGAATCAATGAGCGTGATGTTATGTTAACTGAAGCCTCTTTAACAGTTCAGCCCATAGATATTGATGAAACACAAATACCTGACGTTCCTCCTTTGCCCCGATCAAAAGGAATCTCAGGTACAATTCAGGGTTCTAAAAATAGTACGCCATTATGTCAGGGGCAAGCGGTCGAACGTGTTGCTGACGCAACCAGAGATGTACAGTTAGATAATTTAGTTACTCAACGACTTCAGGTGAGAGACTTAGACGTCGGACGTCTTAATGTTTCCGAGCTCCAGGCAAACAAAATCTTGGTCTCGGATATCGAAGGCATGACTTTACAGGTATCTGAGCTTGATTCCAAATCTGGTCACATATCGGTGAGCGGTATCGAGTTTTCTCAATCTGTGATTGACGAAATCGTCAAAAAATTCGCTGAAATATCAACCGGTCACGGGCCATCTCAAAACGAACTTGTTGTCGAACGGTCTCGTCCTGTTAGTCACGAGGAACAAACTCAAACAGAGGAAATTAAAGAAACGAAGGAGAAAATCAAACAAACTGTTGAAGAAGAAGCACCGGCGAGGCCATCTCCACCACAGCGACTTGGAAGCTCAGATGACGGCGCTGCACCACCTCTGCGACCACCTCCTCCAGACCTAACGCCCCTATTGTATTCATATCTTCAAGACTTAAGTATACCACCAGCGTCGCTTGCCCCTCAGCGGCCACTACGAGAACGACATTTTCCAGAATTCCATGAACCTCAGCATCAGACCCCGCCACCTCCTGCTCGTCGAGCAAAGCGGAAACCGACTGCCCCCCATACAGAGTCCAGCTCTGATGACGGTCGTCTTAGACCTTCACCGCGACGCATGCCTCCCCCCGTCCGCACCCACGAAACCTCTATAGCAGAAGCCGGTGTAAATTTTTTGAGAGTGTGTCAGAGTTCAATCAGTAGGACGCTGAGGAATGTATTTAATTCGTTCATGGCTTACATTAACCGTACAGAGGATAAAAGGGATGCGCAAATGGCATTGGTAATATTCTTAGTTCTGATCGCAGGTTTGATAATGTTCGGTCTGAGCGATAGTAAAACAATACATCATCATCATTGGGAATTCTTCAATCCTCCGGACGGTAAGCCTTGA
Protein
MALHDDVDGRDLRHESPGYATVDKVPYTPSKGLRRSVSATPPVRRRKSNSSERKYYTVGPSKAGPDRPPRKKSSTSLMTLGSYTKRSVSSDITQYVEIDDAFEMNKDLKSGEIINKMKDRPLPPPPRPPRGSRRKKKTRNYGEGDPTTESERNVEAEFDNQEEIKKNEDIVEIEVSTQTDPLPDDVDFELDENLDISMSSSLRDIVDEDSLMTRSHPRLTESPRTSRPTSRSEKSLKFSDPKISELSKPHIGRTSPTVILVEKRVSSPTRINERDVMLTEASLTVQPIDIDETQIPDVPPLPRSKGISGTIQGSKNSTPLCQGQAVERVADATRDVQLDNLVTQRLQVRDLDVGRLNVSELQANKILVSDIEGMTLQVSELDSKSGHISVSGIEFSQSVIDEIVKKFAEISTGHGPSQNELVVERSRPVSHEEQTQTEEIKETKEKIKQTVEEEAPARPSPPQRLGSSDDGAAPPLRPPPPDLTPLLYSYLQDLSIPPASLAPQRPLRERHFPEFHEPQHQTPPPPARRAKRKPTAPHTESSSDDGRLRPSPRRMPPPVRTHETSIAEAGVNFLRVCQSSISRTLRNVFNSFMAYINRTEDKRDAQMALVIFLVLIAGLIMFGLSDSKTIHHHHWEFFNPPDGKP

Summary

Ontologies

Topology

Length:
645
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
19.34584
Exp number, first 60 AAs:
0
Total prob of N-in:
0.06901
outside
1  -  604
TMhelix
605  -  624
inside
625  -  645
 
 

Population Genetic Test Statistics

Pi
21.682249
Theta
5.689888
Tajima's D
0.14732
CLR
0.03835
CSRT
0.431628418579071
Interpretation
Uncertain
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