Silkworm Genome Informatics Database

Gene

KWMTBOMO00595

Pre Gene Modal

BGIBMGA012227

Annotation

PREDICTED:_uncharacterized_protein_LOC105842554_[Bombyx_mori]

Location

Bomo_Chr1(-):18041783-18055195 View in EpiBrowser

Location in the cell

Mitochondrial Reliability : 2.109

CDS

ATGAGGGTTGACTTCCGCGGGCTAAAGTGTGCGACTGCACTCCGAGCCAATCTCAAATCTGCAATGTACGAAAGCAGCTGCTCCTATGCTGGGGCTTTGGAACTAAAACGCAGCGCACTGAAGGAGGAACCGTGGCCGGCATCAGAATGGCCACCCTATCGCCTTCACCAATCAACCTTCGAGCAATTGAAGCAGAGCGTGGAGAAGGCCAAGGCGGCTCTTCAGGACAGGTCAGGCTTACTCGGGACGGCGACGGCTTTCGGTGACTTCTACGGAGGTCAGCTGGGCCAAGACGCTGGAGCTACACTAGGCTTCGGACGTGGCGCTCGAACAGAAGATTCTATGCTCGCATCTGTGGACAAAGGCAAAACTGTTGGCAACGATAAACTCTCTTCGGGGCTCAGTAAGGGGTACGCCACACCCACACTCTCAGACACATTGCGCAGCACTAAATGTACAGGTCAGTGGAATTTCTCTTTTTTAAAACGTGCGTATGCATAA

Protein

MRVDFRGLKCATALRANLKSAMYESSCSYAGALELKRSALKEEPWPASEWPPYRLHQSTFEQLKQSVEKAKAALQDRSGLLGTATAFGDFYGGQLGQDAGATLGFGRGARTEDSMLASVDKGKTVGNDKLSSGLSKGYATPTLSDTLRSTKCTGQWNFSFLKRAYA

Similarity

Belongs to the ETS family.

Uniprot

A0A2H1VP01 A0A194PH28 A0A194QZ72 A0A212EQF2 A0A2W1BQT2 N6THI3 + More
A0A1I8NDB5 A0A1A9XR21 A0A0P8YJ42 A0A1A9Z948 A0A1A9VHB2 A0A1B0C207 A0A1A9X7H1 A0A1B0FQY9 A0A2J7RG75

Pubmed

26354079 22118469 28756777 23537049 25315136 17994087 + More

EMBL

ODYU01003594 SOQ42561.1 KQ459605 KPI92014.1 KQ460953 KPJ10275.1 + More
AGBW02013270 OWR43707.1 KZ150069 PZC74083.1 APGK01026626 KB740635 KB632195 ENN79884.1 ERL89942.1 CH902618 KPU79009.1 JXJN01024283 CCAG010003580 CCAG010003581 CCAG010003582 NEVH01004403 PNF39832.1

Proteomes

UP000053268 UP000053240 UP000007151 UP000019118 UP000030742 UP000095301 + More
UP000092443 UP000007801 UP000092445 UP000078200 UP000092460 UP000092444 UP000235965

Pfam

PF00178 Ets

Interpro

IPR000418   Ets_dom        + More
IPR036390   WH_DNA-bd_sf
IPR036388   WH-like_DNA-bd_sf
IPR035575   Fli-1

SUPFAM

SSF46785 SSF46785

Gene 3D

1.10.10.10

ProteinModelPortal

A0A2H1VP01 A0A194PH28 A0A194QZ72 A0A212EQF2 A0A2W1BQT2 N6THI3 + More
A0A1I8NDB5 A0A1A9XR21 A0A0P8YJ42 A0A1A9Z948 A0A1A9VHB2 A0A1B0C207 A0A1A9X7H1 A0A1B0FQY9 A0A2J7RG75

KEGG

105842554 no KO assigned | (RefSeq) uncharacterized LOC105842554

GO

GO:0003677 GO:0043565 GO:0005634 GO:0003700

PANTHER

PTHR11849:SF161

Subcellular location

Nucleus

Length:

166

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02713

Exp number, first 60 AAs:

0.00104

Total prob of N-in:

0.22590

outside

1 - 166

Pi

23.769147

Theta

22.391731

Tajima's D

-1.024393

CLR

0.004942

CSRT

0.130193490325484

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics