Gene

KWMTBOMO00594

Pre Gene Modal

BGIBMGA012228

Annotation

IQ_and_AAA_domain-containing_protein_1_[Operophtera_brumata]

Location

Bomo_Chr1(-):18031659-18034645      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.69

CDS

ATGGCGAATAAAGATTATTACGAACGATGGCTCAAATTGAAAGAAGCTATAAACACGACAATTCTCGAAGACGAAAGAGTACAAGAACTAGCCGCAGCATTTATTGGTATAAAACCACAAGGCACAGCTGTTGAAATTGTAGCCCGAGTTTACTGCAAATATTGCGACCTGTACAACAAACTTTGCGACTGCTATGATCAAATGGAACAAGTTCAAAGGCGGCCTTACATAAAGAAAATAATTGATGCGTTAACGTGTCGTCTACTCGAATTGAAGGCAACATTAGAAGACGTCGAATTGTTTGAGTTCACATACCCTGAAAATGCTTTACAACAAATGTTAATGATACCTTCTGATATACAAATACTTTGCCCTTTCTTCTACCCATTCGAGACACGACAAGAAGAAATGCAATACATAGTAGATCAAATTTTAGCTGGTAACAGAATCGGTGATCCAACACCGACTCCTTCAGAAATTGAACGGAAAGAAGAGGCGCGCTTAGAAGATGAAAGAATAAAACAAGAAGAAAAAGAGGCAGAAATTAAAAGAAAACTAGTTATGGGAGAAGACATAATTGAACCAGAAATTGTAATTACGTTGTCACCAGAAGATCAAGAAGAACTTAGACTTAAACAAGAATATGAAACCCATGTATCAAATATACAAAGAATGGAAAGATCAAGAATTACCACCAGAGAAAATGCGCATAAAGCAAATAAAGATGCCAATTTGTATTTAGAATTAGCTGGTTTAAAACAGCCACAAGCCAAGGAAGAACTAAGACTAAAGGCAGCACATTTAATACAATCTGTATACAGAAAATTTATGCACATAAAAAGAGATCATGCAATAGAATACAAACTTAAACAAAAACTAGGAATGATTATCCCATCGTGGTCAACACCTTCACATAAAATTCAATTGGAGAAAGTCCGAGAAGAACGTAGAAATTTTAGAAGACAATATTACGAAGAGTGGCTCCAGAAAAACCTTAATGAAAAAACACGGGTCCTGAAATTAAGGAAAGGTGATATAATGGAAGATATTTCAGCCGAAGTCCGACAATGGTTTCAGGAGTGGTATAATGAAGCGAGGCTATTTGATGAATATCCTTGGCCTGAAGAAGGTGGTTCGATTTTAGTTGTCCAGGGAGAAACTTTCAGCGTCCCAGAATATATGGAATGGCGTAAAGAAGAAGAAAAAAGATTAAAAGCCGCAGCCGGAAACCCGAAGACAAAAGAACAAATTAAAGCGGAAAAAAAGGCTGAGAAAGAAGAGAAGAAGAGAATAGAAATGGATGCAAAGGAAAAAGAAAAGAAACGTCTATTAGATTATAAAAAGTCTAGATTAAATCCAGATAACGATCCCGGTGTCTATATAACGCCGGGTCAAAATATAGAGCCGTTGAAAAGTGCCTGGGACTCTTACCAAAGTCAGTGGAAAAATATTGAGACCCCGGATGCTCCTCGTGAAGTTACTAAAGGCTACATAATGCAACTCATAACCGAATCAGCCTATCAGGACGTTCAACTACAATTAAGACCTATCGTAGATGAAATGATGAGATTGGAACTAAACTTATTAAAGAACTCGCTAAAACTTGATTATCAAGCCGCCGGGATTGTTAAGCCCCCTCAAACCATGAAGAGAAAAAAGCCTAAAAAACAAAAGACACCTAAACCCGATAAAGTAAGTCCTGCAGCCATGTTTCAGCAACTGGTCGATGAAGGTATAATTAAAAAGTACCCTAAAGTAACGCTTGATGATTACTGGGGCGATCAAAACTATGCTGCTGCTGATATGAGAGCAACGCTTTGGACTCCAGCTTTTCCACCACATAGCATTGGTGACGTGAAAGAACAAGTGAGAGTACGTTGTTTGCTCACTCTCTGCTCTTCATGTCCAAATGCAGTGAGGACTCAGCTACTTGTGGGTCCTAAGTCTGCGGGTAAAAGAACATTAATTTACGCAATAGCAACCGAAACTAACTCCATCTTGATAGATCTGTCGCCATTAAATGTATACAACAAATTCCCGGGGCCAAAGAATTTGAAGATTATGTATAGCTTCGTAAACAGAATTAGCAGACTGATGCAGCCGACCATAATATTAATTGAAAATGCCGAAAAAATGTTTTACAAGAAAGTACCGAAAGAAGAGAAGTCCTTCGATCCTACTCGGCTACAACGAGACTTTGTTAAGGAAATAGTAAAACCTATAACTCCTGAAGACAAGATCTTGATTCTAGGTACAGCAGCGGAACCATGGCTCGCGAAAGGAGCTCAGATGTCCAAAGCCTTTCCATCGCTGATCATGATGCCGAGGAGTGATTATGGCAGCATATCATTCATTCTAACAAAAGTGCTCATGAAATATCATGGTGTCAAAAGAGATTTTAATGTACACAGTGTCGCACAAGCCTTAAGGGGCTATGATATCAACATCATAAAGAAAGGAGTCGAAACCCTGTTGAATGGTGAGCGTATTGCTCAACTCTACCACAAGCCATTACAACCTGACGAGATTTTAATTGCAGTACTGGATACCGAAGGCGCAACCTATACAGGTAAAGAGGATTATGCGTTATACAAAAATTGGTACGAGTCATATTCCCCTTGGGGCCAGAAATATTTGGACTACATGATCATGATTGAGTCGCAATTGGCCTATAAACTGAAAGCAGAGAAGAAAAAAGCCGGATAG

Protein

MANKDYYERWLKLKEAINTTILEDERVQELAAAFIGIKPQGTAVEIVARVYCKYCDLYNKLCDCYDQMEQVQRRPYIKKIIDALTCRLLELKATLEDVELFEFTYPENALQQMLMIPSDIQILCPFFYPFETRQEEMQYIVDQILAGNRIGDPTPTPSEIERKEEARLEDERIKQEEKEAEIKRKLVMGEDIIEPEIVITLSPEDQEELRLKQEYETHVSNIQRMERSRITTRENAHKANKDANLYLELAGLKQPQAKEELRLKAAHLIQSVYRKFMHIKRDHAIEYKLKQKLGMIIPSWSTPSHKIQLEKVREERRNFRRQYYEEWLQKNLNEKTRVLKLRKGDIMEDISAEVRQWFQEWYNEARLFDEYPWPEEGGSILVVQGETFSVPEYMEWRKEEEKRLKAAAGNPKTKEQIKAEKKAEKEEKKRIEMDAKEKEKKRLLDYKKSRLNPDNDPGVYITPGQNIEPLKSAWDSYQSQWKNIETPDAPREVTKGYIMQLITESAYQDVQLQLRPIVDEMMRLELNLLKNSLKLDYQAAGIVKPPQTMKRKKPKKQKTPKPDKVSPAAMFQQLVDEGIIKKYPKVTLDDYWGDQNYAAADMRATLWTPAFPPHSIGDVKEQVRVRCLLTLCSSCPNAVRTQLLVGPKSAGKRTLIYAIATETNSILIDLSPLNVYNKFPGPKNLKIMYSFVNRISRLMQPTIILIENAEKMFYKKVPKEEKSFDPTRLQRDFVKEIVKPITPEDKILILGTAAEPWLAKGAQMSKAFPSLIMMPRSDYGSISFILTKVLMKYHGVKRDFNVHSVAQALRGYDINIIKKGVETLLNGERIAQLYHKPLQPDEILIAVLDTEGATYTGKEDYALYKNWYESYSPWGQKYLDYMIMIESQLAYKLKAEKKKAG

Uniprot

H9JRR8   A0A212EQD9   A0A0L7KVF3   A0A194QY98   A0A194PG59   A0A2W1BKB1   + More
A0A2H1VP02   A0A1Y1KY14   D6WQF6   U4ULN2   A0A1W4X4H8   Q174V8   E0W0Z2   A0A1J1HZC0   A0A232ETQ2   A5PF14   A0A336LSG3   A0A2W1BLP7   A0A2P8ZCN0   A0A182JGG6   A0A1A9VPK4   A0A2A4JLN3   A0A1A9ZJP8   A0A3P9IEI9   A0A1B0GCY7   A0A1B0D9K0   A0A1B0AVH1   A0A1Q3FSV2   A0A2W1BJP3   A0A3P9MQJ6   H2LLP1   A0A182QCJ7   A0A2D0R034   A0A2D0R1U8   A0A1A9WDF1   B3NZQ0   A0A3B0K740   B4QWK3   A0A2I4BDF6   A0A3B1K3G2   B4HJX9   Q9VHB4   B3M2G3   A0A0B4KFL6   A0A0M8ZY94   A0A182WEB7   B4GDS9   B4PUQ9   B5DYW8   A0A212FGX2   Q7PZL1   A0A182MTW6   B4NB38   A0A182NZY0   A0A182TNG2   A0A1W4VYY4   A0A195DRJ4   A0A2K5BZ71   W5JHS3   A0A084W9A5   A0A1A8AR81   A0A2K5BZ76   B0WFT5   A0A2S2R8G2   B4M4B6   A0A146ZPU2   A0A182FTQ2   A0A182HHP9   A0A182YBM7   A0A182VBF7   A0A182XJN0   A0A182N2Z1   A0A3L8DBR8   A0A182QSD3   A0A026WZG7   A0A0M4EPR6   Q8SX18   A0A182W2G8   B4JFE1   A0A182JQY3   A0A1U7R4D6   M7ATR6   A0A2K6K1E6   B0XJ33   A0A1I8NTL7   A0A1I8M6V9   A0A2R8ZQP8   A0A2K6FLP3   A0A2J8RKC4   H2PP29   A0A2J8JZB2  

Pubmed

19121390    22118469    26227816    26354079    28756777    28004739    + More
18362917    19820115    23537049    17510324    20566863    28648823    23594743    29403074    17554307    17994087    25329095    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    15632085    12364791    14747013    17210077    20920257    23761445    24438588    25244985    30249741    24508170    23624526    25315136    22722832   

EMBL

BABH01017284    AGBW02013270    OWR43706.1    JTDY01005419    KOB67019.1    KQ460953    + More
KPJ10274.1    KQ459605    KPI92013.1    KZ150069    PZC74084.1    ODYU01003594    SOQ42560.1    GEZM01074361    JAV64585.1    KQ971354    EFA06079.1    KB632263    ERL90905.1    CH477405    EAT41606.1    DS235863    EEB19297.1    CVRI01000037    CRK93455.1    NNAY01002246    OXU21733.1    AL844185    UFQT01000067    SSX19367.1    KZ150171    PZC72613.1    PYGN01000103    PSN54256.1    NWSH01001077    PCG72729.1    CCAG010002244    AJVK01012979    JXJN01004244    GFDL01004371    JAV30674.1    KZ150003    PZC75269.1    AXCN02001663    CH954181    EDV49760.1    OUUW01000008    SPP83880.1    CM000364    EDX13607.1    CH480815    EDW42863.1    AE014297    AAF54404.4    CH902617    EDV43416.1    AGB95805.1    KQ435796    KOX73550.1    CH479182    EDW34590.1    CM000160    EDW96676.1    CM000070    EDY68409.2    AGBW02008591    OWR52978.1    AAAB01008986    EAA00378.3    AXCM01000173    CH964232    EDW81002.1    KQ980612    KYN15124.1    ADMH02001207    ETN63666.1    ATLV01021662    KE525321    KFB46799.1    HADY01018516    SBP57001.1    DS231920    EDS26429.1    GGMS01017113    MBY86316.1    CH940652    EDW59477.1    GCES01017972    JAR68351.1    APCN01002432    QOIP01000010    RLU17348.1    AXCN02001144    KK107077    EZA60539.1    CP012526    ALC46876.1    AY094902    AAM11255.1    CH916369    EDV93422.1    KB581441    EMP26315.1    DS233427    EDS29928.1    AJFE02049639    NDHI03003681    PNJ08981.1    ABGA01195119    NBAG03000407    PNI28114.1   

Proteomes

UP000005204    UP000007151    UP000037510    UP000053240    UP000053268    UP000007266    + More
UP000030742    UP000192223    UP000008820    UP000009046    UP000183832    UP000215335    UP000000437    UP000245037    UP000075880    UP000078200    UP000218220    UP000092445    UP000265200    UP000092444    UP000092462    UP000092460    UP000265180    UP000001038    UP000075886    UP000221080    UP000091820    UP000008711    UP000268350    UP000000304    UP000192220    UP000018467    UP000001292    UP000000803    UP000007801    UP000053105    UP000075920    UP000008744    UP000002282    UP000001819    UP000007062    UP000075883    UP000007798    UP000075885    UP000075902    UP000192221    UP000078492    UP000233020    UP000000673    UP000030765    UP000002320    UP000008792    UP000069272    UP000075840    UP000076408    UP000075903    UP000076407    UP000075884    UP000279307    UP000053097    UP000092553    UP000001070    UP000075881    UP000189706    UP000031443    UP000233180    UP000095300    UP000095301    UP000240080    UP000233160    UP000001595   

PRIDE

H9JRR8    Q9VHB4    Q8SX18   

Pfam

PF00004   AAA        + More
PF00612   IQ
PF00579   tRNA-synt_1b
PF00176   SNF2_N

Interpro

IPR003959   ATPase_AAA_core        + More
IPR027417   P-loop_NTPase       
IPR003593   AAA+_ATPase       
IPR000048   IQ_motif_EF-hand-BS       
IPR012317   Poly(ADP-ribose)pol_cat_dom       
IPR014729   Rossmann-like_a/b/a_fold       
IPR002305   aa-tRNA-synth_Ic       
IPR001412   aa-tRNA-synth_I_CS       
IPR002306   Trp-tRNA-ligase       
IPR024109   Trp-tRNA-ligase_bac-type       
IPR001650   Helicase_C       
IPR014001   Helicase_ATP-bd       
IPR000330   SNF2_N       
IPR038718   SNF2-like_sf       

SUPFAM

SSF52540   SSF52540       

Gene 3D

3.40.50.620     3.40.50.10810    

CDD

cd00806  TrpRS_core
cd00079  HELICc

ProteinModelPortal

H9JRR8   A0A212EQD9   A0A0L7KVF3   A0A194QY98   A0A194PG59   A0A2W1BKB1   + More
A0A2H1VP02   A0A1Y1KY14   D6WQF6   U4ULN2   A0A1W4X4H8   Q174V8   E0W0Z2   A0A1J1HZC0   A0A232ETQ2   A5PF14   A0A336LSG3   A0A2W1BLP7   A0A2P8ZCN0   A0A182JGG6   A0A1A9VPK4   A0A2A4JLN3   A0A1A9ZJP8   A0A3P9IEI9   A0A1B0GCY7   A0A1B0D9K0   A0A1B0AVH1   A0A1Q3FSV2   A0A2W1BJP3   A0A3P9MQJ6   H2LLP1   A0A182QCJ7   A0A2D0R034   A0A2D0R1U8   A0A1A9WDF1   B3NZQ0   A0A3B0K740   B4QWK3   A0A2I4BDF6   A0A3B1K3G2   B4HJX9   Q9VHB4   B3M2G3   A0A0B4KFL6   A0A0M8ZY94   A0A182WEB7   B4GDS9   B4PUQ9   B5DYW8   A0A212FGX2   Q7PZL1   A0A182MTW6   B4NB38   A0A182NZY0   A0A182TNG2   A0A1W4VYY4   A0A195DRJ4   A0A2K5BZ71   W5JHS3   A0A084W9A5   A0A1A8AR81   A0A2K5BZ76   B0WFT5   A0A2S2R8G2   B4M4B6   A0A146ZPU2   A0A182FTQ2   A0A182HHP9   A0A182YBM7   A0A182VBF7   A0A182XJN0   A0A182N2Z1   A0A3L8DBR8   A0A182QSD3   A0A026WZG7   A0A0M4EPR6   Q8SX18   A0A182W2G8   B4JFE1   A0A182JQY3   A0A1U7R4D6   M7ATR6   A0A2K6K1E6   B0XJ33   A0A1I8NTL7   A0A1I8M6V9   A0A2R8ZQP8   A0A2K6FLP3   A0A2J8RKC4   H2PP29   A0A2J8JZB2  

PDB

5Z6R     E-value=0.000123462,     Score=111

KEGG

101745743    no KO assigned | (RefSeq) IQ and AAA domain-containing protein 1-like

GO

GO:0005524   GO:0003950   GO:0006436   GO:0004830   GO:0016021   GO:0006355   GO:0043565   GO:0007166   GO:0016020   GO:0019752   GO:0030246   GO:0007169  

Length:

901

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03868

Exp number, first 60 AAs:

0.0073

Total prob of N-in:

0.00068

outside

1  -  901

 

 

Pi

17.725436

Theta

4.686813

Tajima's D

0.791972

CLR

1.175227

CSRT

0.629318534073296

Interpretation

Uncertain