Gene

KWMTBOMO00593

Pre Gene Modal

BGIBMGA012229

Annotation

PREDICTED:_DNA-binding_protein_D-ETS-3_[Bombyx_mori]

Location

Bomo_Chr1(-):17965029-18005035      View in EpiBrowser

Full name

DNA-binding protein D-ETS-3      

Transcription factor

ETS

Location in the cell

Nuclear   Reliability : 3.864

CDS

ATGTTTGGACCTACGAGCAGCCGGCTAGCTAATTCAGGATCAGGACAAATCCAGCTGTGGCAATTTCTACTAGAGCTCTTGAGTGACTCCAGCAATGCGGGCTGCATCACATGGGAAGGCACTAATGGGGAGTTCAAGCTAACTGATCCGGACGAGGTGGCAAGGCGGTGGGGCGAACGCAAGTCCAAGCCAAACATGAACTATGACAAGCTAAGCAGGGCATTGAGATACTACTACGATAAAAATATAATGACGAAAGTCCACGGCAAGAGGTATGCCTACAAATTCGATTTCCAAGGGCTGGCTGCGGCCACCCAACCAGCCGCTAGCGACCCGGCTTACAAATACCAGAGCGACCTATTCATGAGCTCGTACCATCACTCGGCTAAGCTCTCATCCTTCATGGCTCCACACGCGGCCATGCCTACGTCCACAGCATCGATATTTCCGTCAGCATCGTGGGGAAACTGGGGGGGCGGGGGCAGCAACCTGTACTCCCCCCACACTATGGCACCACCGCACGTGACGTCACATCTCGGCTCCTACCCCCATTACGCATGA

Protein

MFGPTSSRLANSGSGQIQLWQFLLELLSDSSNAGCITWEGTNGEFKLTDPDEVARRWGERKSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFQGLAAATQPAASDPAYKYQSDLFMSSYHHSAKLSSFMAPHAAMPTSTASIFPSASWGNWGGGGSNLYSPHTMAPPHVTSHLGSYPHYA

Similarity

Belongs to the ETS family.

Keywords

Alternative splicing   Complete proteome   DNA-binding   Nucleus   Reference proteome  

Feature

chain  DNA-binding protein D-ETS-3
splice variant  In isoform B.

Uniprot

A0A212EQE1   A0A194PFF1   A0A194QXL0   A0A2A4JEJ3   A0A2W1BQT2   A0A2H1W0A1   + More
A0A0L7KSW4   A0A1B0CCQ0   A0A1I8PM01   A0A1A9XR19   A0A1I8N1S4   A0A0L0BTV2   P29774-2   A0A1W4V9G6   B5DPW2   B4H6G2   B4PJD0   B3NGD4   B4QJ96   B3MA30   A0A0K8US38   B4LHE4   W8B7L2   A0A1W4UX59   A0A0J9UFF6   A0A182QFQ9   A0A182YPK4   B4IZS8   A0A0U1RFE7   P29774   A0A0Q5U3L0   A0A0R1E0U3   A0A0J9RR93   A0A0R3P4V2   A0A1W4VAU5   A0A067R9J6   A0A0Q9WGJ1   A0A0Q9WNZ5   A0A0P8XW75   A0A0R3P7W9   B0VZ95   A0A0P8YJ42   A0A1Q3EZB8   Q7PNQ8   A0A3B0JXH1   A0A0S0WIJ8   A0A0Q9XD37   A0A0S0WNC2   A0A087TD60   D6WEG6   B4HUP5   A0A336LZZ3   Q0IGA0   A0A182UVJ1   A0A1J1I1M0   A0A1S4GR03   Q5TRF5   H9JRR9   E9IAR2   F4WQF6   A0A2A3EM72   E2BRF8   E2AUV3   A0A026WC02   A0A151I9N3   A0A151WWM0   A0A195B3B0   A0A3L8D4H9   T1HT96   U4U3B0   A0A310SIS9   A0A1W4WNA1   A0A195F6L5   A0A0P5G054   A0A154P8L8   A0A0L7QX04   A0A088A9R0   A0A0N0U3K3   A0A158NNI7   E0VZE3   A0A0P6HJW6   A0A0P5G0B6   A0A0C9RRY4   A0A226EXQ5   E9G7X2   A0A182L344   A0A084WJM0   A0A182NJS5   D6N0L0   A0A0P5C511   A0A0P5CH98   A0A2H8TRA9   A0A2S2PBX7   T1IWP8   J9JNU5   N6UMD8   A0A2H8TS23   A0A1S3KD95   A0A091SSS5   A0A091NDT4  

Pubmed

22118469    26354079    28756777    26227816    25315136    26108605    + More
10731132    12537572    12537569    1577186    15632085    17994087    17550304    22936249    24495485    25244985    12537568    12537573    12537574    16110336    17569856    17569867    24845553    12364791    18362917    19820115    17510324    19121390    21282665    21719571    20798317    24508170    30249741    23537049    21347285    20566863    21292972    20966253    24438588    20813265   

EMBL

AGBW02013270    OWR43705.1    KQ459605    KPI92012.1    KQ460953    KPJ10273.1    + More
NWSH01001792    PCG70128.1    KZ150069    PZC74083.1    ODYU01005423    SOQ46252.1    JTDY01006296    KOB66129.1    AJWK01006965    AJWK01006966    AJWK01006967    AJWK01006968    JRES01001347    KNC23510.1    AE014296    AY060316    AY060250    BT003453    M88473    CH379069    EDY73709.1    CH479214    EDW33390.1    CM000159    EDW93598.2    CH954178    EDV51100.2    CM000363    CM002912    EDX09405.1    KMY97863.1    CH902618    EDV41250.2    GDHF01022918    GDHF01018339    JAI29396.1    JAI33975.1    CH940647    EDW68474.1    GAMC01009360    JAB97195.1    KMY97865.1    AXCN02000520    CH916366    EDV95663.1    ACL83249.2    KQS43672.1    KRK01265.1    KMY97864.1    KRT08142.1    KK852612    KDR20251.1    KRF83868.1    CH963847    KRF97658.1    KPU79008.1    KRT08143.1    DS231813    EDS25665.1    KPU79009.1    GFDL01014402    JAV20643.1    AAAB01008960    EAA11764.4    OUUW01000009    SPP85112.1    ALI30457.1    CH933809    KRG05577.1    ALI30458.1    KK114668    KFM63049.1    KQ971318    EFA00351.1    CH480817    EDW50666.1    UFQT01000364    SSX23555.1    CH477261    EAT45657.1    CVRI01000035    CRK92742.1    EAL39909.3    BABH01017280    GL762047    EFZ22345.1    GL888273    EGI63556.1    KZ288212    PBC32855.1    GL449962    EFN81736.1    GL442888    EFN62828.1    KK107288    EZA53503.1    KQ978273    KYM95782.1    KQ982691    KYQ52270.1    KQ976641    KYM78755.1    QOIP01000013    RLU15407.1    ACPB03000749    KB631968    ERL87547.1    KQ767283    OAD53460.1    KQ981744    KYN36240.1    GDIQ01251470    JAK00255.1    KQ434846    KZC08265.1    KQ414705    KOC63125.1    KQ435891    KOX69432.1    ADTU01021606    ADTU01021607    ADTU01021608    ADTU01021609    DS235851    EEB18749.1    GDIQ01026755    JAN67982.1    GDIQ01248186    JAK03539.1    GBYB01011330    JAG81097.1    LNIX01000001    OXA62383.1    GL732534    EFX84587.1    ATLV01024038    ATLV01024039    ATLV01024040    ATLV01024041    ATLV01024042    ATLV01024043    KE525348    KFB50414.1    GU169420    ADG26731.1    GDIP01175460    JAJ47942.1    GDIP01175461    JAJ47941.1    GFXV01004890    MBW16695.1    GGMR01014079    MBY26698.1    JH431627    ABLF02032443    APGK01026616    APGK01026617    KB740635    ENN79882.1    GFXV01005200    MBW17005.1    KK482937    KFQ61050.1    KL380915    KFP87212.1   

Proteomes

UP000007151    UP000053268    UP000053240    UP000218220    UP000037510    UP000092461    + More
UP000095300    UP000092443    UP000095301    UP000037069    UP000000803    UP000192221    UP000001819    UP000008744    UP000002282    UP000008711    UP000000304    UP000007801    UP000008792    UP000075886    UP000076408    UP000001070    UP000027135    UP000007798    UP000002320    UP000007062    UP000268350    UP000009192    UP000054359    UP000007266    UP000001292    UP000008820    UP000075903    UP000183832    UP000005204    UP000007755    UP000242457    UP000008237    UP000000311    UP000053097    UP000078542    UP000075809    UP000078540    UP000279307    UP000015103    UP000030742    UP000192223    UP000078541    UP000076502    UP000053825    UP000005203    UP000053105    UP000005205    UP000009046    UP000198287    UP000000305    UP000075882    UP000030765    UP000075884    UP000007819    UP000019118    UP000085678   

PRIDE

P29774    H9JRR9   

Pfam

PF00178   Ets        + More
PF00201   UDPGT
PF00069   Pkinase
PF02198   SAM_PNT

Interpro

IPR035575   Fli-1        + More
IPR000418   Ets_dom       
IPR036390   WH_DNA-bd_sf       
IPR036388   WH-like_DNA-bd_sf       
IPR002213   UDP_glucos_trans       
IPR000719   Prot_kinase_dom       
IPR017441   Protein_kinase_ATP_BS       
IPR011009   Kinase-like_dom_sf       
IPR008271   Ser/Thr_kinase_AS       
IPR003118   Pointed_dom       
IPR013761   SAM/pointed_sf       

SUPFAM

SSF46785   SSF46785        + More
SSF56112   SSF56112       
SSF47769   SSF47769       

Gene 3D

1.10.10.10     1.10.150.50    

ProteinModelPortal

A0A212EQE1   A0A194PFF1   A0A194QXL0   A0A2A4JEJ3   A0A2W1BQT2   A0A2H1W0A1   + More
A0A0L7KSW4   A0A1B0CCQ0   A0A1I8PM01   A0A1A9XR19   A0A1I8N1S4   A0A0L0BTV2   P29774-2   A0A1W4V9G6   B5DPW2   B4H6G2   B4PJD0   B3NGD4   B4QJ96   B3MA30   A0A0K8US38   B4LHE4   W8B7L2   A0A1W4UX59   A0A0J9UFF6   A0A182QFQ9   A0A182YPK4   B4IZS8   A0A0U1RFE7   P29774   A0A0Q5U3L0   A0A0R1E0U3   A0A0J9RR93   A0A0R3P4V2   A0A1W4VAU5   A0A067R9J6   A0A0Q9WGJ1   A0A0Q9WNZ5   A0A0P8XW75   A0A0R3P7W9   B0VZ95   A0A0P8YJ42   A0A1Q3EZB8   Q7PNQ8   A0A3B0JXH1   A0A0S0WIJ8   A0A0Q9XD37   A0A0S0WNC2   A0A087TD60   D6WEG6   B4HUP5   A0A336LZZ3   Q0IGA0   A0A182UVJ1   A0A1J1I1M0   A0A1S4GR03   Q5TRF5   H9JRR9   E9IAR2   F4WQF6   A0A2A3EM72   E2BRF8   E2AUV3   A0A026WC02   A0A151I9N3   A0A151WWM0   A0A195B3B0   A0A3L8D4H9   T1HT96   U4U3B0   A0A310SIS9   A0A1W4WNA1   A0A195F6L5   A0A0P5G054   A0A154P8L8   A0A0L7QX04   A0A088A9R0   A0A0N0U3K3   A0A158NNI7   E0VZE3   A0A0P6HJW6   A0A0P5G0B6   A0A0C9RRY4   A0A226EXQ5   E9G7X2   A0A182L344   A0A084WJM0   A0A182NJS5   D6N0L0   A0A0P5C511   A0A0P5CH98   A0A2H8TRA9   A0A2S2PBX7   T1IWP8   J9JNU5   N6UMD8   A0A2H8TS23   A0A1S3KD95   A0A091SSS5   A0A091NDT4  

PDB

4IRI     E-value=1.50129e-49,     Score=491

KEGG

101745591    K09436 friend leukemia integration 1 transcription factor | (RefSeq) DNA-binding protein D-ETS-3

GO

GO:0005634   GO:0003700   GO:0043565   GO:0006355   GO:0000981   GO:0006357   GO:0030154   GO:0003677   GO:0016758   GO:0005524   GO:0004672   GO:0007166   GO:0016020   GO:0019752   GO:0030246   GO:0007169   GO:0016021  

PANTHER

PTHR11849:SF161  

Subcellular location

Nucleus  

Length:

186

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0245

Exp number, first 60 AAs:

0.00036

Total prob of N-in:

0.03457

outside

1  -  186

 

 

Pi

25.244307

Theta

25.470711

Tajima's D

-0.901339

CLR

0.166503

CSRT

0.152692365381731

Interpretation

Uncertain