Gene

KWMTBOMO00591  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA012230

Annotation

PREDICTED:_CCR4-NOT_transcription_complex_subunit_1_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr1(-):17918927-17941875      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 1.547

CDS

ATGAACCTGGACTCTTTAACGTTGAGCTTATCGCATATACATTATCTCGTCGTAAATTTAAACAAGAAAAATTTCAAGCAGACGAGTCAAGAATTGAATCAGATTGTCAGTGTCTATGGCTTGGAAGCAGAGAATCAAGTTTTAAGATGTCTTCTCACTGAAGCGGCAAGGATAGCTTGGGACGGAGACCGTACAACTTCTGCAGCTACTAATAGCATCCACGCCTCCCTTCTTGGACAACAGTTGGCAGGCTTGCTCAATCATCCAGCTAAATCAACAGTTGTTTGCCGGGCTGTTGATCATCCAACACGCTCTGTAACAAAGCTATTAAAGCCTACAAATGCACTATTGAATCGACTATCTAGACTGTTGAAGTTAACTACAGCAGAGGATGTTGCCTTTTCATTGGCTCTGAGAAGGTATTCAACAAAGAGTGAGATAGTTGCAGTTGCAAAGCAGCACTTGAAGAAAAGATTCTTGGATTTAATACAGTGCTATCTCGACGCAGAACGGGGACATCAGGCGGAGCGTGCAGGACTTCAGGAATGCAGCCCTGAAGTGTTGCAGTCACTCCTCACGAGTCTCGCGCTCGACAATATCAAATTAGCGGCAGTTACGAAGGATTTGTTTTTGAAGAGACTGAGATCAGACTTCCCTCGTGAAGTAGTCCCGATAGTACTCGCACCGTTGATTTATCCGGACGACACTCAGACACCTCTCGAGGAAATGACTTCAGCCGATGATATGGCTGCTGCCATGATGGAGAATTCCCTGCCAGATATTATCCGAGATATGGGCCATGCTTTTACAACTTCAGTTGAGGATTGCAAGAACAATATGATAAACTTTGGTGCGAGAGAACCAACCGCAATAGACGTGGCTAGAATCATAGCTGTGATGGTTCGCTATCACAGTAACCAACAAGACGGTCCGCAAATACAGACACCAGGCAACTTTTGGATGAGTCATGAAGCTAAAAAAGAACCAGCTGCACATCCACACAGTGAATGGAATGCTGAAGTATTTGTTCAGACATTAAAAGAATTAGCATCTAATCTGAACTGGAAGGAAGTGATACTACAGCTGGATCACCCAGAATTCTTTGTACCAGACCGAACAGGACTATCCCTACTATTCACCATACTGAGACTTGGTCTACAGAGCGCCGGCTATCCGGCCAATATATTCCCCGTTGAGTATTTATGCCGACGGTGGACGAATTTGGAAGGACAGATGAGTTTGATCAGCCACATTCTCAAACATTCTGACGTATTCTGTTTTGCCGATCATCCTTTTCATCCAGTATCAATAGACATTTTGAAATCTCCTCCTGAGACCGACAACAAAGAAGTGGGCACTTGGCGTTGCCTCTACTTAGTGGAGTTACTGCTGTATGCTGCAGAGCGTGGTTATTACATGCAAGTCCATGAACTCTTTAAAATGCCACTTCAACATTGTCCCGATATTTTGCTCTTAGTTTTACTGCAAATCAGTCCACCGATTACTGTCTTTAGGCAAGAGTTATTGACGACACTGATTCCAATATTTCTAGGTAATCATCCAAATTCAGGCATAATTCTCCACCACGCCTGGCATACACAGAACCCTAACATAAAACCTATCATCATGCACTCAATGGCAGATTGGTACATACGCGGTGAGAGTGACCAATCCAAATTATCTAGAATTTTGGACGTCGCACAGGATTTAAAGGCGCTGTCGCTCTTATTGAATGTACAATCGTTCCCGTTTGTTATTGATTTGGCTTGTTTGGCGTCTAGGAGGGAGTATCTCAAATTAGATAAATGGTTGACCGACAAAATCAGAGATCACGGTGAGACGTTTGTGTCGGCTATGGTGAAATTTTTACAAAGGCGATGTCCACAGGTGCTCGGCAAGGCACCCGAAGAACAATTGCCTAAGGCTGCGCAGCTGCCACCCGAAACGATTACAACAATGTTGGCTTGCTTACAACTATGCATTCCAAATGTTTCTCAAGAATTACAGGAGGCTATTTACAACGTAATAGGAAGCTGTCAGACGTTAATACTCAGCAAAACACGACAAAACATTGCGGGAATAGCAAGACCTCATACAAGGGTCATGGAAACTCAATTCAATCCAGCTGGCCTAGGAGGGCAATTGTTTACACCCCACGTTGACGCTATCGGTAATTTGGCACCGGGCATGGCAAATATGACTTTAGGTGCCCCCGCGAATACTGCATTTGCTATGCCCGGTACACTCGGACCACTCGTAACCACTCCGGGCTCTCCTGTTAGGCTACTTGGAGGCGGACCTAACAGTCCGTTTGCCATGATGCCGTTACCGCCCAACGCAAACCTCGGAGCGCTCGCGAGAATGGCTCCCGCTCCCGCGATTGATAAACCTCGTCTGCAGGATCCCATTCCCTTCCCGGAAGTGATGCACACCGTTGCTAAGGAAATCGAGGACGAAGCAAACAGTTACTTCCAAAGGATATACAATCATCCTCCACATCCGACTTTATCAATAGACGAAGTACTAGATATGCTCAAAAAATTTCAGGATTCCCCTAACAAGAGGGAACGGGAAGTATTCTCATGCATGTTGCGTAATCTTTTTGAAGAGTATAAGTTTTTCCCCCAATACCCCGACAAAGAGTTACAAATTACTGCTCAACTGTTTGGCGGTATCATCGAAAGAGGATTAGTCCCAAGCTACGTGTCTTTAGGGTTAGCGTTGCGTTTCGTTCTTGATGCTTTACGAAAGGCCGAGGGATCGAAAATGTATTATTTCGGAATTGCGGCTTTAGATCGTTTTAAATCTCGTCTTAAAGATTATCACAAATATTGTGAGCACGTTCGCGCTATTCCGCATTTTAGTGAATTCCCTCCCCATTTGATCGAATATGTCGAATATGGCTTACAAAGCCAAGAACCTCCCAATAAACCCCAGGGGCCGGTACTTCCTGCTACGTTGGCTGCTATTCTTAATCAGAGTGCCGTTGTAACTGTCTCGGCGCCTTATAGGCCAGTAGTTTGTGCTCCTCCATCTATTTCGGTGATGTCGAAAATGGCCGCGTGCCCTGCTGGAAGCATGGGTAGTAGGCCATCTATCGCGAACGCTACAAATATCGACACTCTTTTGACTGCTACTGACAGGGAAGAAAAAATTAATGCCCCACCAGAACCCATACAAGATAAAACTGCTTTCATTTTTAACAATCTTAGTCAACTTAATTTGCAAACCAAATGTGAAGAACTTAAGGAAGTACTTACCGATGAATACTATCCCTGGCTTTCTCAGTACCTTGTTATGAAGAGAGCCTCTATTGAACTCAATTTCCATGCTTTGTATTCTAATTTCCTTGATGTTCTTAAAGTCCGCGAAGTAAATAAATTAGTCACAAAGGAAACTTATCGCAATATCCGTGTGTTATTGCGTTCAGATAAAGGAATCGCTAATTTCTCGGATCGATCGCTTCTCAAGAATCTTGGTCACTGGCTCGGCATGCTAACACTTGCAAGAAACCAGCCGATTCTCCTCCTCGACTTGGATTTAAAGGCGTTGGTCCTCGAAGCCTATCATAAAGGCCAGCAAGAACTGCTTTATGTGGTTCCTTTCGTTGCGAAAGTTTTAGAATCTTGCGCGAAAAGTGTAGTATTTAAACCTCCGAACCCGTGGACGATGGCCCTTATGAACGTTCTAGCAGAACTACATCAAGAACCCGACTTGAAATTGAACCTAAAATTTGAAATCGAAGTATTGTGTAAAAACTTAGGCCTGGACATAATGGATTTGAAGCCTTCCCTTTACTTGAAAGACCCTGAAAAATTGAGGCAGATTGAGTTCCAACTATCACAGCCGAAGCCAAACAAAGAAGCCGCAAATACAATGCCGGTCAACCCGCCAATTCAAGTACCACCGCCGCAGATACCAATAATGCCGCCTCAGCCTCCGATGATTCCTGCTGAAGAAATGGCAGGACCTGTCCCTCCTCCACCAACTGGCTTAGTGCCCGCCGATCCTGGTCTGATGGGCGTGCTCGGTATGCCAGAACCCAGGTTCAACTATTTGGATGTGAACGTATCCTCCACGTCTGCGTTCGGACAAAAGATTTGTTTCAACCCTCACATAATCTTATTCCAAAACTACCCGCATCTTAAACAGTTTGTAAAGCCCGCGATCGAGAGATCGATCCAAGAATGGATTCACCCAGTCGTTGATAGGTCTATCAAGTATGCTTTGACAACTTGTGAACAGATCATACGGAAGGATTTCGCATTGGACCCTGACGAAGTTCGAATGCGTACCTGCGCTCATCACATGATGCGCAACTTGACTGCCGGCATGGCAATGATCACATGCCGAGAGCAGATCATCACCACCATCAGCACTAATCTGAAGGCAGCTTTCATCACTGCTCTCATGCCATCAACACAACAACAAAAAGAAATCATCGAGAGTGCAGCTGCTGTCCTTGCTACTGAAAACATGGAACTGGCCTGCGCTTTCATTCAGAAGACAGCCGTTGAGAAGGCTCTACCTGAATTAGACAAACGCTTGATTAGCGATTACGAAATGCGAAAACTGGCCCGTCAAGAAGGCCGCCGCTATTATGACACCATCGTCGTGACTTACCAGACTGAAAGGATCCCGGAAAGAGTCCGCCTGCGCGTCGGAGGTCCGACAGACATGCAGATATCAGTATACGAAGAGTTCGCATGCAACATTCCGGGATTTGTCCCCGTCAGAGATGCGGGCATGTTCATCCCGAAGCCGTCTCAAGAGCAGATTCCACAGCTGTTCATGAATCCAGCTCAAGTGTACGGCGCTGACGAGATGGGCGCTCTGATAAACACTGCGGAACTATTCCTTGCCAATTCCTTAGGTGTGGCTTCCTTGGCTGTCCAGGCAGCGAACATGCATACGCTGCTCGAGTGCTTGTTTATGGCGAGACGGAGTCGCGATATTGTGTCTGGCTGTACTCTACTGCAGAAGGCTGTAGATGGTTTGCTTGATGGACATTTAGTCCCACCCGGTGCGAGCAACGAACACATCGAAATGATGGCCCGCTACCGCGACATCCACCTTCGTGTCCTGAAACTACTCGAAGACGCCAGAGTCTATGGACACGTTTGGACTTCCAAGCAGATCACCTGCTGCTTGATTGAATGCAGGGAGGAACTCCGATACAATATCGAGGCTGTTGACTGCCTTATCAGAAACCATTTGGTTAATCTACCACAGTATGATATCGCCCTTGCTCATATGATGGACAATGGCAATAACTACGTGGCGGTAGCATTCGCTATGCAACTAGTACAGCTGTATCTTGTCGATGACAGAAATAACATGTACGTTAACGAATCTGACTTGTACCACACGACCGAAATGTTAGTGAGGGTCATGTCCCACTCAAGGACGCCTCCGCCCGAGGGTCTGGGCTCCCTGATCGAGATTTTGAGGGTGAATCAGGACCCTAGTGCATATTTGGGCGAAAGGTCACCGCTCGGACCGACGGCCCACATACATTCTGGAATACTGCAAGTTCGAGCACAAAACTATGACGACCCACCCGGACTTCAAGAGAAGACTGAGAATTTACTCCGTGAATGGAGGAATGTTCTCCTCAGTCCTCTGACAGAGATCGAACTGGCGCAGAACTTCAACTTGTATGTCCACCGAATGAACATGAACGGCATTCTCAAATCTGATGACATGATCGCTAGATTCTTCAGAATGGCCTCGCAGATGTGCATCGAGAATGTATACCAACTTCTGAACGAGGACAGGGTTAATCCACCTCCAGTGCCTCAGAAACGTGAGAAATTCTACACCATGTGCGACTCTTTTATCAAACTTGTCTCGCTTTTGATCAAGAATACAGCCGATAGCGGAAATCCCACTCCGAAATTAAACCTTCTGAACAAGATTCTAGGCATTATAGTTGGCTGGCTACTCCAGGACCACGATGACCAGGGCACCAACTTCCAGCAGCTACCGTACCACCGCCTACTCCTGATTCTGTTCCTCGACATGAACATGGCTGAGCCTGTTCTAGAATCTATGAACTATCAGGTTCTGACTGCGTTCTGCCACACCCTTCGCATTATCAAACCAAGTGTCGCTCCCGGATTCTGTTACGCGTGGCTCGAGATTGTGGCCCACCGTGCCTTCATAAACCGCGTCCTAGCTGTTACTCCACAACAAAAGGGCTGGGGAATGTACTCGACCTTACTCATTGAGCTGTTCAAATTCCTTGATCCATTCCTGCGTAACACTGAGCTTGCTCCTCCGGTCATGACGCTATACAAAGGAACCCTCAAGGTGTTGTTGGTCTTACTCCATGATTTCCCGGAGTTCCTGTGCGATTACCACTATGGTTTCTGTGACGAAATCCCCCCGAACTGCATTCAAATGCGCAATTTAATACTGTCCGCTTTCCCGCGGAACATGAGGCTTCCCGATCCGTTCACGCCGAATCTGAAAGTTGACTTGCTCCCGGAAATTGCTCTACCGCCTCGTGCGGTCATCAACTATTCTACGATCATCTCTGCGTCACAGTTCAAGAAGGATTTGGACGCGTACCTCAAAGCGAGAGCTCCAGTTACCTTCCTGTCTGAATTAAGGGGAAATATGCAGGTTGCGAACGAGCCTGGCAAGCGATACAACAGTCAGCTGATGAACGCGGTTGTCTTGTACGTCGGCACACAGGCCATTGCCTATATTCGTGCTAAAGGGCAAACTCCGAATATGTCGACGATTGCACATTCAGCTCACATGGATATCTTCCAGAACTTTACCGTGGATTTCGATTTTGAAGGCCGGTACCTGTTCTTGAACGCGATAGCCAATCAGCTGCGTTACCCGAACAGTCACACGCACTACTTCTCTTGCTGTCTCCTCTACTTGTTCGCGGAGGCCAATTCGGAAGCAGTACAAGAACAGATCACCAGGATGCTCCTGGAACGGCTGATCGTCAACCGTCCGCACCCTTGGGGTCTGCTCATCACTTTCATCGAACTAATCAAGAATCCCATCTACAAATTCTGGTCCCACGAATTTGTACACTGCGCTCCGGAGATAGAGAAGCTGTTCGCTTCGGTGGCGCGATCGTGCATCGCCGACACAACGGGTGGGGGAGGGGGGGAGAGGGAAGCGGCCGAGTAG

Protein

MNLDSLTLSLSHIHYLVVNLNKKNFKQTSQELNQIVSVYGLEAENQVLRCLLTEAARIAWDGDRTTSAATNSIHASLLGQQLAGLLNHPAKSTVVCRAVDHPTRSVTKLLKPTNALLNRLSRLLKLTTAEDVAFSLALRRYSTKSEIVAVAKQHLKKRFLDLIQCYLDAERGHQAERAGLQECSPEVLQSLLTSLALDNIKLAAVTKDLFLKRLRSDFPREVVPIVLAPLIYPDDTQTPLEEMTSADDMAAAMMENSLPDIIRDMGHAFTTSVEDCKNNMINFGAREPTAIDVARIIAVMVRYHSNQQDGPQIQTPGNFWMSHEAKKEPAAHPHSEWNAEVFVQTLKELASNLNWKEVILQLDHPEFFVPDRTGLSLLFTILRLGLQSAGYPANIFPVEYLCRRWTNLEGQMSLISHILKHSDVFCFADHPFHPVSIDILKSPPETDNKEVGTWRCLYLVELLLYAAERGYYMQVHELFKMPLQHCPDILLLVLLQISPPITVFRQELLTTLIPIFLGNHPNSGIILHHAWHTQNPNIKPIIMHSMADWYIRGESDQSKLSRILDVAQDLKALSLLLNVQSFPFVIDLACLASRREYLKLDKWLTDKIRDHGETFVSAMVKFLQRRCPQVLGKAPEEQLPKAAQLPPETITTMLACLQLCIPNVSQELQEAIYNVIGSCQTLILSKTRQNIAGIARPHTRVMETQFNPAGLGGQLFTPHVDAIGNLAPGMANMTLGAPANTAFAMPGTLGPLVTTPGSPVRLLGGGPNSPFAMMPLPPNANLGALARMAPAPAIDKPRLQDPIPFPEVMHTVAKEIEDEANSYFQRIYNHPPHPTLSIDEVLDMLKKFQDSPNKREREVFSCMLRNLFEEYKFFPQYPDKELQITAQLFGGIIERGLVPSYVSLGLALRFVLDALRKAEGSKMYYFGIAALDRFKSRLKDYHKYCEHVRAIPHFSEFPPHLIEYVEYGLQSQEPPNKPQGPVLPATLAAILNQSAVVTVSAPYRPVVCAPPSISVMSKMAACPAGSMGSRPSIANATNIDTLLTATDREEKINAPPEPIQDKTAFIFNNLSQLNLQTKCEELKEVLTDEYYPWLSQYLVMKRASIELNFHALYSNFLDVLKVREVNKLVTKETYRNIRVLLRSDKGIANFSDRSLLKNLGHWLGMLTLARNQPILLLDLDLKALVLEAYHKGQQELLYVVPFVAKVLESCAKSVVFKPPNPWTMALMNVLAELHQEPDLKLNLKFEIEVLCKNLGLDIMDLKPSLYLKDPEKLRQIEFQLSQPKPNKEAANTMPVNPPIQVPPPQIPIMPPQPPMIPAEEMAGPVPPPPTGLVPADPGLMGVLGMPEPRFNYLDVNVSSTSAFGQKICFNPHIILFQNYPHLKQFVKPAIERSIQEWIHPVVDRSIKYALTTCEQIIRKDFALDPDEVRMRTCAHHMMRNLTAGMAMITCREQIITTISTNLKAAFITALMPSTQQQKEIIESAAAVLATENMELACAFIQKTAVEKALPELDKRLISDYEMRKLARQEGRRYYDTIVVTYQTERIPERVRLRVGGPTDMQISVYEEFACNIPGFVPVRDAGMFIPKPSQEQIPQLFMNPAQVYGADEMGALINTAELFLANSLGVASLAVQAANMHTLLECLFMARRSRDIVSGCTLLQKAVDGLLDGHLVPPGASNEHIEMMARYRDIHLRVLKLLEDARVYGHVWTSKQITCCLIECREELRYNIEAVDCLIRNHLVNLPQYDIALAHMMDNGNNYVAVAFAMQLVQLYLVDDRNNMYVNESDLYHTTEMLVRVMSHSRTPPPEGLGSLIEILRVNQDPSAYLGERSPLGPTAHIHSGILQVRAQNYDDPPGLQEKTENLLREWRNVLLSPLTEIELAQNFNLYVHRMNMNGILKSDDMIARFFRMASQMCIENVYQLLNEDRVNPPPVPQKREKFYTMCDSFIKLVSLLIKNTADSGNPTPKLNLLNKILGIIVGWLLQDHDDQGTNFQQLPYHRLLLILFLDMNMAEPVLESMNYQVLTAFCHTLRIIKPSVAPGFCYAWLEIVAHRAFINRVLAVTPQQKGWGMYSTLLIELFKFLDPFLRNTELAPPVMTLYKGTLKVLLVLLHDFPEFLCDYHYGFCDEIPPNCIQMRNLILSAFPRNMRLPDPFTPNLKVDLLPEIALPPRAVINYSTIISASQFKKDLDAYLKARAPVTFLSELRGNMQVANEPGKRYNSQLMNAVVLYVGTQAIAYIRAKGQTPNMSTIAHSAHMDIFQNFTVDFDFEGRYLFLNAIANQLRYPNSHTHYFSCCLLYLFAEANSEAVQEQITRMLLERLIVNRPHPWGLLITFIELIKNPIYKFWSHEFVHCAPEIEKLFASVARSCIADTTGGGGGEREAAE

Uniprot

H9JRS0   A0A1E1WSC8   A0A2A4JTK4   A0A2A4JSL1   A0A2W1BVD1   A0A212FKR2   + More
A0A2H1WND9   A0A194R349   A0A194PLM7   A0A067RHI0   E2AFR3   A0A1W4XJI2   A0A158NAM7   A0A0L7QZ42   F4W6V5   A0A195EVV6   A0A0N0U4G7   A0A026WKA9   A0A087ZUH9   A0A2A3ELQ5   A0A151XHX8   A0A0C9QII0   A0A195DQS3   A0A195CJI7   E2C0J4   A0A151I5R0   A0A232ESU0   A0A1Y1MI77   A0A0T6B0C5   A0A1B6CVM6   A0A1S4G0B9   A0A182H8V2   A0A1L8DHC0   Q16I78   A0A336L8R8   N6UM33   A0A1B0CVX6   H3ARS3   A0A0K8TMB4   A0A1L8DGI1   A0A1L8DG41   Q172M3   A0A0K8TC24   A0A1B6FH34   A0A1B6FYE4   A0A1B6EUY5   A0A1B6FQM9   E0W0V5  

Pubmed

19121390    28756777    22118469    26354079    24845553    20798317    + More
21347285    21719571    24508170    30249741    28648823    28004739    17510324    26483478    23537049    9215903    26369729    20566863   

EMBL

BABH01017273    BABH01017274    GDQN01001217    JAT89837.1    NWSH01000649    PCG75028.1    + More
PCG75027.1    KZ149925    PZC77605.1    AGBW02008029    OWR54280.1    ODYU01009818    SOQ54496.1    KQ460953    KPJ10271.1    KQ459605    KPI92010.1    KK852680    KDR18603.1    GL439124    EFN67724.1    ADTU01010383    KQ414683    KOC63889.1    GL887762    EGI70068.1    KQ981954    KYN32276.1    KQ435835    KOX71508.1    KK107167    QOIP01000010    EZA56487.1    RLU17682.1    KZ288223    PBC31961.1    KQ982108    KYQ60009.1    GBYB01000394    GBYB01000397    JAG70161.1    JAG70164.1    KQ980612    KYN15162.1    KQ977642    KYN00895.1    GL451800    EFN78511.1    KQ976413    KYM90355.1    NNAY01002374    OXU21424.1    GEZM01033209    JAV84350.1    LJIG01016379    KRT80777.1    GEDC01019699    JAS17599.1    JXUM01030389    KQ560883    KXJ80491.1    GFDF01008273    JAV05811.1    CH478101    EAT33966.1    UFQS01002158    UFQT01002158    SSX13381.1    SSX32815.1    APGK01027093    KB740648    ENN79772.1    AJWK01031382    AFYH01152803    AFYH01152804    AFYH01152805    AFYH01152806    AFYH01152807    AFYH01152808    AFYH01152809    AFYH01152810    AFYH01152811    AFYH01152812    GDAI01002096    JAI15507.1    GFDF01008528    JAV05556.1    GFDF01008683    JAV05401.1    CH477434    EAT40985.1    GBRD01002777    JAG63044.1    GECZ01020289    JAS49480.1    GECZ01014565    JAS55204.1    GECZ01028266    JAS41503.1    GECZ01017289    JAS52480.1    DS235862    EEB19261.1   

Proteomes

UP000005204    UP000218220    UP000007151    UP000053240    UP000053268    UP000027135    + More
UP000000311    UP000192223    UP000005205    UP000053825    UP000007755    UP000078541    UP000053105    UP000053097    UP000279307    UP000005203    UP000242457    UP000075809    UP000078492    UP000078542    UP000008237    UP000078540    UP000215335    UP000069940    UP000249989    UP000008820    UP000019118    UP000092461    UP000008672    UP000009046   

PRIDE

H9JRS0   

Pfam

PF16415   CNOT1_CAF1_bind        + More
PF04054   Not1
PF16417   CNOT1_TTP_bind
PF16418   CNOT1_HEAT
PF12842   DUF3819
PF02935   COX7C

Interpro

IPR016021   MIF4-like_sf        + More
IPR007196   CCR4-Not_Not1_C       
IPR024557   CCR4-Not_Not1su_DUF3819       
IPR038535   CNOT1_TTP_bind_sf       
IPR032191   CNOT1_CAF1_bind       
IPR032193   CNOT1_TTP_bind       
IPR040398   CNOT1       
IPR032194   CNOT1_HEAT       
IPR036636   COX7C/Cox8_sf       
IPR004202   COX7C/Cox8       
IPR012337   RNaseH-like_sf       

SUPFAM

SSF81427   SSF81427        + More
SSF53098   SSF53098       

Gene 3D

1.25.40.180     1.25.40.840     4.10.49.10    

ProteinModelPortal

H9JRS0   A0A1E1WSC8   A0A2A4JTK4   A0A2A4JSL1   A0A2W1BVD1   A0A212FKR2   + More
A0A2H1WND9   A0A194R349   A0A194PLM7   A0A067RHI0   E2AFR3   A0A1W4XJI2   A0A158NAM7   A0A0L7QZ42   F4W6V5   A0A195EVV6   A0A0N0U4G7   A0A026WKA9   A0A087ZUH9   A0A2A3ELQ5   A0A151XHX8   A0A0C9QII0   A0A195DQS3   A0A195CJI7   E2C0J4   A0A151I5R0   A0A232ESU0   A0A1Y1MI77   A0A0T6B0C5   A0A1B6CVM6   A0A1S4G0B9   A0A182H8V2   A0A1L8DHC0   Q16I78   A0A336L8R8   N6UM33   A0A1B0CVX6   H3ARS3   A0A0K8TMB4   A0A1L8DGI1   A0A1L8DG41   Q172M3   A0A0K8TC24   A0A1B6FH34   A0A1B6FYE4   A0A1B6EUY5   A0A1B6FQM9   E0W0V5  

PDB

4C0D     E-value=0,     Score=2456

KEGG

101739199    K12604 CCR4-NOT transcription complex subunit 1 | (RefSeq) CCR4-NOT transcription complex subunit 1

PATHWAY

03018    RNA degradation - Bombyx mori (domestic silkworm)

GO

GO:0006417   GO:0030015   GO:0004129   GO:0016021  

PANTHER

PTHR13162  

Length:

2384

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.12385

Exp number, first 60 AAs:

0.00016

Total prob of N-in:

0.00003

outside

1  -  2384

 

 

Pi

4.65153

Theta

15.718038

Tajima's D

-1.277013

CLR

0.10944

CSRT

0.0905954702264887

Interpretation

Possibly Positive selection