SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00590
Pre Gene Modal
BGIBMGA012231
Annotation
PREDICTED:_protein_bric-a-brac_1?_partial_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.016
 

Sequence

CDS
ATGCCGGCTGAAGAAGATCCCGTCGCCATGGAGGACCGAGGGACTCCCCAACAGTTCTGCCTGCGATGGAACAATTATCAGAGCAACTTGACCAGCTGTTTCGATCAGCTGCTACAGACGGAACTTTTCGTCGATGTGACCCTTGCTTGCGAGGGACAGAAACTGAAAGCGCACAAGCTGGTGCTGTCGGCCTGCAGCCCGTACTTCCAGGAGTTGCTCACCGACAACCCGTGCCAGCACCCGATCATCATAATGAACAACGACATTAAATACTGTGACTTGAAGGCGGTGGTGTACTACATGTACCGCGGTGAGATAAACGTGTCCGAGGACCAGATCCCGGCTCTGTTGAAAGTGGCCGAGGCGTTGAAGATCCGCGGCCTCACGGACGTGAATGCGTCGTCGACTCTGGTCGGCGCCGAGGCGCGAGCCAGCAAGCGCGCCGCAAGTCGCGAGCGGTCCCCTGGGCGAGCCCGACGCCGCCTCTCGGAAAGTCGCGGGCGACGCGCCTCCACCCCAAGTCCCGCTCCGAGCGCCGAGCCCGCCGCTGCAGCCGCACCGCCCGCTCCGCCTGCTCCGCCGATGCCGCCAGACGACGCCGACATCCGTCCTGGCATCGCCGAGATGATCCGCGAAGAAGAAAGGGTGAGTCCGCTCTCTTAA
Protein
MPAEEDPVAMEDRGTPQQFCLRWNNYQSNLTSCFDQLLQTELFVDVTLACEGQKLKAHKLVLSACSPYFQELLTDNPCQHPIIIMNNDIKYCDLKAVVYYMYRGEINVSEDQIPALLKVAEALKIRGLTDVNASSTLVGAEARASKRAASRERSPGRARRRLSESRGRRASTPSPAPSAEPAAAAAPPAPPAPPMPPDDADIRPGIAEMIREEERVSPLS

Summary

Uniprot
Pfam
PF00651   BTB
Interpro
IPR011333   SKP1/BTB/POZ_sf        + More
IPR000210   BTB/POZ_dom       
SUPFAM
SSF54695   SSF54695       
ProteinModelPortal
PDB
4HXI     E-value=4.20804e-07,     Score=126

Ontologies

Topology

Length:
220
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.02450
outside
1  -  220
 
 

Population Genetic Test Statistics

Pi
11.833988
Theta
11.240635
Tajima's D
0.371005
CLR
0
CSRT
0.488725563721814
Interpretation
Uncertain
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