Gene

KWMTBOMO00584

Pre Gene Modal

BGIBMGA012352

Annotation

PREDICTED:_chromatin_complexes_subunit_BAP18-like_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr1(+):17408873-17415426      View in EpiBrowser

Transcription factor

MYB

Location in the cell

Nuclear   Reliability : 2.696

CDS

ATGAATAATTCTGCAGCTAAAGTTGGGGAAATTTTTAGAGAGGCGGGAACTGCATTCAATAAATTATCAGAGATGACAATGCTTCTTCATCCCATGGGAGATTCGCAGCCGGGAGGTAAATGGACTGAAGAAGAAATAGAAATGCTGCGCAATTGTGTACATAGATTTGCAGTAGACCTGAATAAACTCAGTCAACACATTAAGAATAGGACAGTAAATCAAATTCGATCAACGTTGAAGAAGAAAGCTTTTGAAGACGCAGGTATACCTGTGAGACAGGTAAGCGGCACAACAGGAAATATGGGTCAGCCACAATCCCAGGTAGCATCCCCACTGGCTGCCATCATCCCGCAGTCAGTGATAGGAAACAATGCCGAGGTAACGCTTAACATGTTGAACGCATCCGAGAACGAAGTTGACGTTGAAGAACTGACAAATGACGTCAAACTTGAGTTCGAGAGCGAACCCGGAAACGAGGAGTGA

Protein

MNNSAAKVGEIFREAGTAFNKLSEMTMLLHPMGDSQPGGKWTEEEIEMLRNCVHRFAVDLNKLSQHIKNRTVNQIRSTLKKKAFEDAGIPVRQVSGTTGNMGQPQSQVASPLAAIIPQSVIGNNAEVTLNMLNASENEVDVEELTNDVKLEFESEPGNEE

Similarity

Belongs to the chorion protein family.

Uniprot

H9JS42   A0A1E1WR14   A0A212EUJ3   A0A1E1WI23   A0A2H1V4Z7   A0A2A4K624   + More
A0A2W1BBM0   A0A194Q573   A0A1B6DTM0   A0A1B6E7K5   A0A1Y1M189   A0A1B6FVJ2   A0A1B6IV30   A0A0N0PDX4   K7INF2   A0A232EMM7   A0A2A3EGP9   A0A088ATF8   A0A069DW54   A0A0T6BH31   A0A067RE85   A0A171ARI5   A0A0V0G9M1   A0A0P4VQK0   R4FKA4   A0A1B6M3F6   J3JVA0   A0A0L7RJL7   A0A1B6GQF4   D2A128   A0A1W4XKK2   A0A154NXB2   V5I7Q4   A0A0J7L3L5   A0A0N0BGR2   A0A1B6LEA9   A0A1B6LPY4   A0A310SDK7   A0A0K8TSH9   E2A3K1   A0A182U9P1   A0A182HRJ6   Q7Q1A2   A0A1B6KRA2   A0A0A9XBL4   A0A1B6KH57   T1J454   A0A131XDX3   A0A2R5LIA2   A0A293M018   A0A151IKS8   A0A182KAR8   A0A195EU38   A0A026WPA3   A0A131XVK1   B7PMV0   A0A0K8RL61   A0A195E6C0   F4WP53   A0A0P4WIG7   A0A182IJI9   A0A1S4K733   L7M2T5   A0A131Z5U4   E9J567   A0A2M4AUK9   A0A182F2I5   A0A1B0DLG9   A0A2M4BZW8   A0A2M3ZDE1   A0A2M3ZDJ1   A0A224Y459   A0A1S4FE32   A0A182H4Y3   Q175N9   A0A0C9SAR8   A0A1S4FE59   A0A195B9W8   A0A023FH42   A0A1S4EP73   A0A151WM72   A0A336MDX1   A0A023FWQ4   A0A1E1WZS8   A0A1S3KFG9   V4AMZ0   A0A182NUI5   A0A182RAS8   A0A2J7PUP9   E0VFP0   E9HCX9   A0A224Y1M4   A0A0P4Y1R6  

Pubmed

19121390    22118469    28756777    26354079    28004739    20075255    + More
28648823    26334808    24845553    27129103    22516182    23537049    18362917    19820115    26369729    20798317    12364791    14747013    17210077    25401762    26823975    28049606    24508170    30249741    21719571    25576852    26830274    21282665    28797301    26483478    17510324    26131772    28503490    23254933    20566863    21292972   

EMBL

BABH01017222    GDQN01001604    JAT89450.1    AGBW02012361    OWR45165.1    GDQN01004487    + More
JAT86567.1    ODYU01000701    SOQ35911.1    NWSH01000142    PCG79122.1    KZ150355    PZC71234.1    KQ459460    KPJ00688.1    GEDC01008303    JAS28995.1    GEDC01003385    JAS33913.1    GEZM01044873    JAV78075.1    GECZ01015716    JAS54053.1    GECU01016907    JAS90799.1    KQ460009    KPJ18478.1    NNAY01003330    OXU19610.1    KZ288253    PBC30963.1    GBGD01003335    JAC85554.1    LJIG01000300    KRT86640.1    KK852691    KDR18358.1    GEMB01000745    JAS02393.1    GECL01001324    JAP04800.1    GDKW01001869    JAI54726.1    ACPB03022918    GAHY01001943    JAA75567.1    GEBQ01009511    JAT30466.1    APGK01037630    BT127167    KB740948    KB632364    AEE62129.1    ENN77392.1    ERL93604.1    KQ414578    KOC71152.1    GECZ01005186    JAS64583.1    KQ971338    EFA02597.1    KQ434777    KZC04202.1    GALX01006030    JAB62436.1    LBMM01001044    KMQ97024.1    KQ435771    KOX75154.1    GEBQ01017968    JAT22009.1    GEBQ01014212    JAT25765.1    KQ797156    OAD46997.1    GDAI01000279    JAI17324.1    GL436444    EFN71983.1    APCN01001714    AAAB01008980    EAA14440.3    GEBQ01025988    JAT13989.1    GBHO01029119    GBRD01014838    GDHC01004549    JAG14485.1    JAG50988.1    JAQ14080.1    GEBQ01029483    JAT10494.1    JH431837    GEFH01004770    JAP63811.1    GGLE01005137    MBY09263.1    GFWV01008639    MAA33368.1    KQ977164    KYN05220.1    KQ981965    KYN31765.1    KK107139    QOIP01000003    EZA57798.1    RLU24701.1    GEFM01006100    JAP69696.1    ABJB010665494    ABJB011056119    DS749127    EEC07922.1    GADI01001973    JAA71835.1    KQ979608    KYN20394.1    GL888243    EGI63984.1    GDRN01045239    JAI66877.1    GACK01006418    JAA58616.1    GEDV01001850    JAP86707.1    GL768124    EFZ12032.1    GGFK01011155    MBW44476.1    AJVK01016432    AJVK01016433    GGFJ01009486    MBW58627.1    GGFM01005758    MBW26509.1    GGFM01005824    MBW26575.1    GFPF01001201    MAA12347.1    JXUM01110448    KQ565412    KXJ71010.1    CH477398    EAT41761.1    GBZX01002413    JAG90327.1    KQ976542    KYM81032.1    GBBK01004123    JAC20359.1    KQ982944    KYQ48933.1    UFQT01000773    UFQT01001170    SSX27119.1    SSX29242.1    GBBL01002200    JAC25120.1    GFAC01006892    JAT92296.1    KB201549    ESO96145.1    NEVH01021193    PNF20053.1    DS235123    EEB12196.1    GL732621    EFX70444.1    GFTR01002107    JAW14319.1    GDIP01233755    JAI89646.1   

Proteomes

UP000005204    UP000007151    UP000218220    UP000053268    UP000053240    UP000002358    + More
UP000215335    UP000242457    UP000005203    UP000027135    UP000015103    UP000019118    UP000030742    UP000053825    UP000007266    UP000192223    UP000076502    UP000036403    UP000053105    UP000000311    UP000075902    UP000075840    UP000007062    UP000078542    UP000075881    UP000078541    UP000053097    UP000279307    UP000001555    UP000078492    UP000007755    UP000075880    UP000069272    UP000092462    UP000069940    UP000249989    UP000008820    UP000078540    UP000079169    UP000075809    UP000085678    UP000030746    UP000075884    UP000075900    UP000235965    UP000009046    UP000000305   

PRIDE

H9JS42   

Pfam

PF00249   Myb_DNA-binding        + More
PF01723   Chorion_1
PF17906   HTH_48
PF00035   dsrm

Interpro

IPR037931   BAP18        + More
IPR009057   Homeobox-like_sf       
IPR001005   SANT/Myb       
IPR017884   SANT_dom       
IPR002635   Chorion       
IPR041426   Mos1_HTH       
IPR017930   Myb_dom       
IPR014720   dsRBD_dom       

SUPFAM

SSF46689   SSF46689       

CDD

cd00167  SANT
cd00048  DSRM

ProteinModelPortal

H9JS42   A0A1E1WR14   A0A212EUJ3   A0A1E1WI23   A0A2H1V4Z7   A0A2A4K624   + More
A0A2W1BBM0   A0A194Q573   A0A1B6DTM0   A0A1B6E7K5   A0A1Y1M189   A0A1B6FVJ2   A0A1B6IV30   A0A0N0PDX4   K7INF2   A0A232EMM7   A0A2A3EGP9   A0A088ATF8   A0A069DW54   A0A0T6BH31   A0A067RE85   A0A171ARI5   A0A0V0G9M1   A0A0P4VQK0   R4FKA4   A0A1B6M3F6   J3JVA0   A0A0L7RJL7   A0A1B6GQF4   D2A128   A0A1W4XKK2   A0A154NXB2   V5I7Q4   A0A0J7L3L5   A0A0N0BGR2   A0A1B6LEA9   A0A1B6LPY4   A0A310SDK7   A0A0K8TSH9   E2A3K1   A0A182U9P1   A0A182HRJ6   Q7Q1A2   A0A1B6KRA2   A0A0A9XBL4   A0A1B6KH57   T1J454   A0A131XDX3   A0A2R5LIA2   A0A293M018   A0A151IKS8   A0A182KAR8   A0A195EU38   A0A026WPA3   A0A131XVK1   B7PMV0   A0A0K8RL61   A0A195E6C0   F4WP53   A0A0P4WIG7   A0A182IJI9   A0A1S4K733   L7M2T5   A0A131Z5U4   E9J567   A0A2M4AUK9   A0A182F2I5   A0A1B0DLG9   A0A2M4BZW8   A0A2M3ZDE1   A0A2M3ZDJ1   A0A224Y459   A0A1S4FE32   A0A182H4Y3   Q175N9   A0A0C9SAR8   A0A1S4FE59   A0A195B9W8   A0A023FH42   A0A1S4EP73   A0A151WM72   A0A336MDX1   A0A023FWQ4   A0A1E1WZS8   A0A1S3KFG9   V4AMZ0   A0A182NUI5   A0A182RAS8   A0A2J7PUP9   E0VFP0   E9HCX9   A0A224Y1M4   A0A0P4Y1R6  

KEGG

101738367    K23406 chromatin complexes subunit BAP18 | (RefSeq) chromatin complexes subunit BAP18-like

GO

GO:0016589   GO:0071339   GO:0003677   GO:0007304   GO:0005213   GO:0042600   GO:0007275   GO:0003723   GO:0005622   GO:0006810   GO:0016853   GO:0007166   GO:0016020   GO:0019752   GO:0030246   GO:0007169   GO:0016021  

PANTHER

PTHR21397:SF2  

Subcellular location

Nucleus  

Length:

160

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00292

Exp number, first 60 AAs:

0.00037

Total prob of N-in:

0.21738

outside

1  -  160

 

 

Pi

5.123557

Theta

14.00055

Tajima's D

-0.826155

CLR

0.062888

CSRT

0.170841457927104

Interpretation

Uncertain