Silkworm Genome Informatics Database

Gene

KWMTBOMO00583

Pre Gene Modal

BGIBMGA012235

Annotation

PREDICTED:_uncharacterized_protein_LOC106130523_[Amyelois_transitella]

Location

Bomo_Chr1(-):17395550-17396912 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.649 Nuclear Reliability : 1.133

CDS

ATGTCAATATTAAGAAAGATTCGATTTTATCAGTTCCTGGAGAGACATTATTATTGGGTAGATGTAACCCATATAGAGAGTCCCGATGAATTCTATGTGCGTCCTGTTGCATTCCGTAACGATTTACGATTCCTGCAAGCACCTCGGGAACTGATAAAGGTATGTGAGTTGCAAATCGGGCGCATCGTGTCTTACAAGTCAGAAGTTGTGCAATGCTTCGTTCGTGGTCAACTTATTCTCATCCAAATGATACCATCTGGGGTAGGGCACGAAATTGTGTGCGATCTATTTGCTATGGATTATGGCTTCATTGATAAGCAGATACCGATTTGGAAAATATTCAAGATTCGTAAGTATGCCAATCTTCCAGCACTCAGTACCAAATGCAGTCTTGCAAATTATGTGCTAAAACCTTCACCAGCAGAAACGAAAAATGATACGCTCATAATGCGGCAGGCTCTTGGCGTGAAACGTGCAAAGATGAGAGTATGCGCGAAGTATGGAAACACTATTCTGGTCGACTTGAATGAAGGCACTCCGAACGATGTTTCAATCTCCATTGTGCAGATGAACAACCCTCCCAGCAAATATATGGTAGAGTTGGACGAAGAAGTCAATGAGGTAGCACGTCGCCAGCTCCGCTACATTCGCTGTCACGTCGGTGATGTCTTGCATGTGATTATGCGATACGTCAGCACGCCTTATCGCTTTTTCGTTAGCGATATTAGGACATACCGTGCATACATAGCAAGCCGACCCGATTTCTCTTACTATTGCCAGTATCAGCAACCATTGACCCTCGACAAAGTTCATCCAGGCCTCTGTGTCGCTATTGAGCTACCAGATGAAATATATGAGAGAGCAATTGTTTTAACCGTTGACAAAAAAGAAAAAAAAATACTTGTCAACAAAATTGATTTTGGTGAGGTTATAGAAACCACAATCGACAAGCTGAAACCTGTTAAAGAACAAGTATTCAACCACATGCCCGCATTGGCTATGTGCTGTTCCAGTAGCTTGGCCGCCCCTTATGCTTATGAATTGATGAAAGAGCTTGAGAAGAAACCCGAATTTATGATTCGATTCACTAGCATTGGATGTACCTTTGAGACTCCCAGCCTGGTGGACATTATTCCAATAATTGAGTAA

Protein

MSILRKIRFYQFLERHYYWVDVTHIESPDEFYVRPVAFRNDLRFLQAPRELIKVCELQIGRIVSYKSEVVQCFVRGQLILIQMIPSGVGHEIVCDLFAMDYGFIDKQIPIWKIFKIRKYANLPALSTKCSLANYVLKPSPAETKNDTLIMRQALGVKRAKMRVCAKYGNTILVDLNEGTPNDVSISIVQMNNPPSKYMVELDEEVNEVARRQLRYIRCHVGDVLHVIMRYVSTPYRFFVSDIRTYRAYIASRPDFSYYCQYQQPLTLDKVHPGLCVAIELPDEIYERAIVLTVDKKEKKILVNKIDFGEVIETTIDKLKPVKEQVFNHMPALAMCCSSSLAAPYAYELMKELEKKPEFMIRFTSIGCTFETPSLVDIIPIIE

Uniprot

H9JRS5 H9JRU0 A0A2A4JY36 A0A223A599 A0A1E1WC60 A0A194QA71 + More
A0A212EQG9 A0A212EKF6 A0A2H1VTZ8 A0A091UMV3 A0A093QFX0 A0A026W192 A0A091N8X8 A0A091SL23 A0A3L8DMD9 G5E7M1 G1NEZ9 A0A087VMW7 A0A151NUX6 A0A1V4KIJ8

Pubmed

19121390 26354079 22118469 24508170 30249741 20838655 + More
22293439

EMBL

BABH01017220 BABH01017124 NWSH01000416 PCG76544.1 KX549447 ASR92153.1 + More
GDQN01006527 JAT84527.1 KQ459249 KPJ02372.1 AGBW02013269 OWR43736.1 AGBW02014274 OWR41964.1 ODYU01004412 SOQ44258.1 KL409842 KFQ92269.1 KL671638 KFW82987.1 KK107494 EZA49832.1 KK844261 KFP86188.1 KK476230 KFQ59073.1 QOIP01000006 RLU21594.1 KL499174 KFO13959.1 AKHW03001922 KYO40543.1 LSYS01003057 OPJ84183.1

Proteomes

UP000005204 UP000218220 UP000053268 UP000007151 UP000053283 UP000053258 + More
UP000053097 UP000279307 UP000001645 UP000050525 UP000190648

PRIDE

H9JRS5 H9JRU0

Pfam

PF00567   TUDOR        + More
PF16013   DUF4781
PF01753   zf-MYND

Interpro

IPR002999   Tudor        + More
IPR035437   SNase_OB-fold_sf
IPR039117   RNF17
IPR031962   DUF4781
IPR002893   Znf_MYND

Gene 3D

2.40.50.90

ProteinModelPortal

H9JRS5 H9JRU0 A0A2A4JY36 A0A223A599 A0A1E1WC60 A0A194QA71 + More
A0A212EQG9 A0A212EKF6 A0A2H1VTZ8 A0A091UMV3 A0A093QFX0 A0A026W192 A0A091N8X8 A0A091SL23 A0A3L8DMD9 G5E7M1 G1NEZ9 A0A087VMW7 A0A151NUX6 A0A1V4KIJ8

KEGG

NA

GO

GO:0046872 GO:0071546 GO:0034587 GO:0007281 GO:0033391 GO:0043046 GO:0031047 GO:0007283

PANTHER

PTHR16442

Length:

382

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.17895

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.01768

outside

1 - 382

Pi

4.581514

Theta

3.502184

Tajima's D

0.499784

CLR

0.06201

CSRT

0.548222588870557

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics