Gene

KWMTBOMO00581

Pre Gene Modal

BGIBMGA012351

Annotation

PREDICTED:_alpha-tocopherol_transfer_protein-like_[Amyelois_transitella]

Location

Bomo_Chr1(+):17346073-17356042      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.089 Mitochondrial   Reliability : 1.395

CDS

ATGTCCAAGAGATTGCAGAAGAGATATCTAACCGAGGCTGACGAGTACAAATGTCCGCTATCCGAGGAGACGCAGACGATAGCTTCAGAAGAGTTGCGGGAGACCGAGAGCGCGAGGACACAGGCTCTGCAGGCCCTGAGGAGTTGGATGGAACAGAACCCTAAGCTGTTGGCTGTTCGACTAGACTCGAATTACTTGCTCCGGTTTCTTCGAGCCAAAAAGTTCAGTGTTCCAATGGCTCAGGAGGCAATCGAACGTTATCTGCTCCTGCGTCAATCCTGGGGCATCGCCTTCAACCAGCTCGACTACAAGCTGCCAATCATGATGGAGCTCTTGGAACTCGGATTCGTTTTCGTCAGCCCCTTCAAGGACAAGGGCGGTCGTCGAGTCGTTATTTATAGACCAGGAGTATTCGACCCTTACAAATACACCAACCAAGACATGTGCCGTGTGATGGGCATCTGCTATGAAACCCTTATGGAAGACGAGGAGACTCAAGTCCGAGGAGTGGTTCACTTCGCTGACGGTGGGGGAGTAGGCTTCCCACATCTCACATTATTCACGCCCAAAGAAGCCGTCCGGATTGTCAAGAATGGAGAGCGCACAGTTCCCGTGAGGCATAAGGAAATTTACGGCATCAATGTCCATCCCACGATCAAGTTCGCTTTAGACTTCGGTATGGCTCTCATATCAGAGAAGATCAGGAAGAGAGTCAGACTTTACACGAGCATAAATGACGTAGAAATAGACCAGAGTTTATTGCCCAAAGAGTACGGCGGAGTTATGCCGATGAAGGAAATGATAGAATTATGGAAAGAGCAGCTCGCGAAAAAACGAGACATGGTACTACTCAATGACAAAATGAGCGTGAGATTAGAGATGTACAGTGAAGCAGCGCGCGAAGGCGCTATCTCCGCTTTAAGATCTGGAGCCAACACGTGCGCTGGGGCAGACGCAGTGGGGGACGCCATGCGAGGTCTCACCGGAAACTTCAGAAAACTTGAAGTCGACTAA

Protein

MSKRLQKRYLTEADEYKCPLSEETQTIASEELRETESARTQALQALRSWMEQNPKLLAVRLDSNYLLRFLRAKKFSVPMAQEAIERYLLLRQSWGIAFNQLDYKLPIMMELLELGFVFVSPFKDKGGRRVVIYRPGVFDPYKYTNQDMCRVMGICYETLMEDEETQVRGVVHFADGGGVGFPHLTLFTPKEAVRIVKNGERTVPVRHKEIYGINVHPTIKFALDFGMALISEKIRKRVRLYTSINDVEIDQSLLPKEYGGVMPMKEMIELWKEQLAKKRDMVLLNDKMSVRLEMYSEAAREGAISALRSGANTCAGADAVGDAMRGLTGNFRKLEVD

Uniprot

H9JS41   A0A2H1V4I9   A0A2H4RMS6   S4P5B1   A0A2A4JAD1   A0A194QXT4   + More
A0A212EQF9   I4DLF3   A0A0L7LND3   A0A0N0BJ38   K7IN09   A0A154PAX8   A0A232EUN1   A0A195EGE0   A0A088A3K7   A0A2A3ESN2   A0A195BZV9   A0A151XBM7   F4WG06   A0A195F0M1   A0A195BG52   A0A0J7NHP9   A0A0L7QSH9   A0A158NL16   E2BVA7   A0A3L8D8F9   E2ASK5   D6WH37   A0A1B6FNG7   U4UJG4   A0A026WSH6   A0A1Y1K3A9   A0A1W4X9A7   A0A1Y1K279   A0A182YJN5   N6TQA1   A0A023F3G8   A0A182MHZ6   A0A182W328   A0A182R8F9   A0A224XSK7   A0A182P3G4   A0A182XF13   A0A182VEM5   A0A182TPA3   Q7PQ96   A0A182HVI0   A0A067R5Q1   A0A182SFA0   A0A182GSS2   A0A182Q0E9   A0A336MIP4   A0A182J2L3   A0A2M4BT58   A0A1B6DUL4   A0A2M4BSU0   A0A182FAS6   A0A182NCP0   W5J3E4   A0A1S4FGV5   Q171Y7   A0A2J7QWV1   B0X297   A0A1Q3FQG0   T1I239   A0A2R7WHY3   A0A2H8TNE8   A0A1Q3FQ45   J9JL22   A0A336MXQ0   A0A0T6B116   A0A1B6M111   C4WUM1   A0A1B0DFY3   A0A1B0CH04   A0A3Q0IT56   A0A1J1J4U9   A0A1L8DAJ2   A0A1J1J3N4   A0A1J1J7V7   E0W3B9   A0A1L8DZ54   A0A2J7QIH9   A0A1B0D0M1   A0A182ILW2   A0A1B6IYA5   A0A067RPT1   A0A182PW99   A0A069DTA5   A0A2P8XVF4   A0A182NM49   A0A1B6HID8   A0A182FCH8  

Pubmed

19121390    29136137    23622113    26354079    22118469    22651552    + More
26227816    20075255    28648823    21719571    21347285    20798317    30249741    18362917    19820115    23537049    24508170    28004739    25244985    25474469    12364791    14747013    17210077    24845553    26483478    20920257    23761445    17510324    20566863    26334808    29403074   

EMBL

BABH01017216    ODYU01000641    SOQ35758.1    MG434637    ATY51943.1    GAIX01005649    + More
JAA86911.1    NWSH01002345    PCG68484.1    KQ460953    KPJ10287.1    AGBW02013270    OWR43701.1    AK402121    KQ459605    BAM18743.1    KPI92024.1    JTDY01000466    KOB77053.1    KQ435724    KOX78448.1    KQ434846    KZC08378.1    NNAY01002105    OXU22069.1    KQ978957    KYN26959.1    KZ288187    PBC34710.1    KQ978501    KYM93461.1    KQ982320    KYQ57781.1    GL888128    EGI66773.1    KQ981866    KYN34130.1    KQ976488    KYM83572.1    LBMM01004861    KMQ92030.1    KQ414758    KOC61504.1    ADTU01019141    GL450824    EFN80399.1    QOIP01000011    RLU16373.1    GL442330    EFN63565.1    KQ971321    EFA00115.1    GECZ01018014    JAS51755.1    KB632330    ERL92608.1    KK107111    EZA58933.1    GEZM01096816    JAV54560.1    GEZM01096815    JAV54561.1    APGK01055647    APGK01055648    KB741269    ENN71420.1    GBBI01002886    JAC15826.1    AXCM01000316    GFTR01004914    JAW11512.1    AAAB01008898    EAA09146.6    APCN01005778    KK852680    KDR18600.1    JXUM01017356    KQ560481    KXJ82198.1    AXCN02001182    UFQT01001063    SSX28703.1    GGFJ01007109    MBW56250.1    GEDC01007937    JAS29361.1    GGFJ01007015    MBW56156.1    ADMH02002202    ETN57843.1    CH477443    EAT40799.1    NEVH01009418    PNF33062.1    DS232283    EDS39120.1    GFDL01005317    JAV29728.1    ACPB03000289    KK854855    PTY19253.1    GFXV01003754    MBW15559.1    GFDL01005358    JAV29687.1    ABLF02028481    UFQT01003484    SSX35046.1    LJIG01016378    KRT80782.1    GEBQ01010364    JAT29613.1    AK341126    BAH71591.1    AJVK01059119    AJWK01011791    AJWK01011792    AJWK01011793    AJWK01011794    CVRI01000069    CRL06986.1    GFDF01010724    JAV03360.1    CRL06984.1    CRL06985.1    DS235882    EEB20125.1    GFDF01002346    JAV11738.1    NEVH01013592    PNF28391.1    AJVK01009964    AJVK01009965    GECU01015789    JAS91917.1    KK852542    KDR21724.1    GBGD01002017    JAC86872.1    PYGN01001288    PSN35983.1    GECU01033278    JAS74428.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000007151    UP000053268    UP000037510    + More
UP000053105    UP000002358    UP000076502    UP000215335    UP000078492    UP000005203    UP000242457    UP000078542    UP000075809    UP000007755    UP000078541    UP000078540    UP000036403    UP000053825    UP000005205    UP000008237    UP000279307    UP000000311    UP000007266    UP000030742    UP000053097    UP000192223    UP000076408    UP000019118    UP000075883    UP000075920    UP000075900    UP000075885    UP000076407    UP000075903    UP000075902    UP000007062    UP000075840    UP000027135    UP000075901    UP000069940    UP000249989    UP000075886    UP000075880    UP000069272    UP000075884    UP000000673    UP000008820    UP000235965    UP000002320    UP000015103    UP000007819    UP000092462    UP000092461    UP000079169    UP000183832    UP000009046    UP000245037   

PRIDE

H9JS41   

Pfam

PF00650   CRAL_TRIO        + More
PF03765   CRAL_TRIO_N

Interpro

IPR011074   CRAL/TRIO_N_dom        + More
IPR001251   CRAL-TRIO_dom       
IPR036865   CRAL-TRIO_dom_sf       
IPR036273   CRAL/TRIO_N_dom_sf       

SUPFAM

SSF46938   SSF46938        + More
SSF52087   SSF52087       

Gene 3D

3.40.525.10    

CDD

cd00170  SEC14

ProteinModelPortal

H9JS41   A0A2H1V4I9   A0A2H4RMS6   S4P5B1   A0A2A4JAD1   A0A194QXT4   + More
A0A212EQF9   I4DLF3   A0A0L7LND3   A0A0N0BJ38   K7IN09   A0A154PAX8   A0A232EUN1   A0A195EGE0   A0A088A3K7   A0A2A3ESN2   A0A195BZV9   A0A151XBM7   F4WG06   A0A195F0M1   A0A195BG52   A0A0J7NHP9   A0A0L7QSH9   A0A158NL16   E2BVA7   A0A3L8D8F9   E2ASK5   D6WH37   A0A1B6FNG7   U4UJG4   A0A026WSH6   A0A1Y1K3A9   A0A1W4X9A7   A0A1Y1K279   A0A182YJN5   N6TQA1   A0A023F3G8   A0A182MHZ6   A0A182W328   A0A182R8F9   A0A224XSK7   A0A182P3G4   A0A182XF13   A0A182VEM5   A0A182TPA3   Q7PQ96   A0A182HVI0   A0A067R5Q1   A0A182SFA0   A0A182GSS2   A0A182Q0E9   A0A336MIP4   A0A182J2L3   A0A2M4BT58   A0A1B6DUL4   A0A2M4BSU0   A0A182FAS6   A0A182NCP0   W5J3E4   A0A1S4FGV5   Q171Y7   A0A2J7QWV1   B0X297   A0A1Q3FQG0   T1I239   A0A2R7WHY3   A0A2H8TNE8   A0A1Q3FQ45   J9JL22   A0A336MXQ0   A0A0T6B116   A0A1B6M111   C4WUM1   A0A1B0DFY3   A0A1B0CH04   A0A3Q0IT56   A0A1J1J4U9   A0A1L8DAJ2   A0A1J1J3N4   A0A1J1J7V7   E0W3B9   A0A1L8DZ54   A0A2J7QIH9   A0A1B0D0M1   A0A182ILW2   A0A1B6IYA5   A0A067RPT1   A0A182PW99   A0A069DTA5   A0A2P8XVF4   A0A182NM49   A0A1B6HID8   A0A182FCH8  

PDB

3W68     E-value=6.8579e-16,     Score=204

KEGG

101738235    no KO assigned | (RefSeq) alpha-tocopherol transfer protein-like

GO

GO:0005215   GO:0005622   GO:0006810   GO:0016853   GO:0007166   GO:0016020   GO:0019752   GO:0030246   GO:0007169   GO:0016021  

Length:

337

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.11342

Exp number, first 60 AAs:

9e-05

Total prob of N-in:

0.06810

outside

1  -  337

 

 

Pi

23.682357

Theta

24.683765

Tajima's D

-1.119004

CLR

0.022542

CSRT

0.114344282785861

Interpretation

Uncertain