SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00576  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012240
Annotation
PREDICTED:_uncharacterized_protein_LOC101745012_[Bombyx_mori]
Location
Bomo_Chr1(-):17119935-17142453      View in EpiBrowser
Location in the cell
Extracellular   Reliability : 2.999
 

Sequence

CDS
ATGATATCTATTACAGCAAAATCATGTGGTATCGACGACTTTACTTGCAACAACGGAGCCTGTATCGAGGGTTTCAGACGTTGTGATGGCGCTGTGGACTGTTCTGAAGGCGAAGACGAAGTTAATTGTGAATGCAGAGAGGACCAATTCAGGTGTAGATCTGGATCATGTATTGAATTGAGAAAACGCTGTGATGGATACGAACACTGCAGCGACCGCTCAGACGAGGAGAACTGCAACGGTACGTTGAGTTGTCCACCAGAGAAGTTCGCTTGTAGTCCAACATCATCGGTGCCGTGTGCTATAAGATGCAATGGCTTCCCCGAATGCGATGGGAACGAAGACGAAGACAACTGTCCAGACGAAGAATGCAGCCACCAGTGCGACGGGAAATGTCTTCCGGATGCGAATATCTGTGACTCTATCACGGACTGTTCAGACGGTTCGGACGAGTTGCATTGTGCACAGTGCGATGGTCCAGACGATTACAGGTGTGATACTGACGAGTGTATAAGCAGAAATTGGGTTTGTAACGGCCACTTCGAATGTCCTAACGGCGAAGACGAGGCAGACTGCAACAGTACTATAGTTTCGACTCCAACATGTGACGAAAACAGCTGGCAGTGCCGAAGCGGTCAATGCATACCGTCCAGCAGCTATTGCGACAACGTCTACAACTGTTACGATAGGTCGGATGAAGCCGATTGCCTTCCATCAACTCCTGCATACGAAAACGAATACCCACCAATAGTTTCTACAACTTTGAGTCCTTACTACACAACGACTCGACGAGATGTTGGATCCAGCAATTATGACAGAAGACCTGAAAACCCATACGGATCGGAAAACCAAGGGACATATTCGCCTTACGACGACGACGCAAGACGTCCTACAACGTATTCACCATACGGACCCAGTTCAGAGAGACCTGATCCGCGTCGACCGTATCCACCATATGGCTCTGTAACTACCAACCGACCCGATGACAGGCAGGATCCCTATAGCAGCCCACCTGGTGGGGAATATGATCCTTATGGACAAGGTGCTGGTAGCCCAGATGATAGACGTCCTCCATACAGTCAACCTGGAAATCAAGACATCAGTCCTGGAGGTGGAAGCCCATACAATCCTGAACCAGAAAACCAACCGGATAATAGAGAAGATCCCTCTGGCGGCCAACCTGGCGGTGAGTATAATCCTTATGGCCAGGGTGCTGGTGGACCAGACGATAGACGTCCACCGTATACTCAACCTGGAAGTCAAGATGTAAGTCCAGGAGGTGGAAGCCCATACAATCCCGAATCAGGAAGTCAACCAAATAACAGAGAAGATCCTTATGGTGGCCAGTCTGGTGGTGAATATGATCCTTATGGCCGGGGTGCTGGTAGTCCAGATGATAGACGTCCTCCATACGGTCAATCTGGAAGCCAAGACATCAGTCTTGGAGGTGGAATACCATACAACCCCGAATCAGTAAGGCAACCAGACAACAGAGATCCCTATGGCGGCCAATCCGGTGGTGAATATGATCCCTATGGGCGGGGCGTAAGTGGAACAGACGACAGACGTCAACCTGGAAGCCAAGATGTTGGTCCAGGAGCTTCGGGTCAAGGCAATTCAAATCAACCAGAAAACCGGCCCTATCGTCCTGAAAGTGGCAATAGCGTTTATGAGACGGGTGAGGGGCAATATGGATCTGGTAGTCAAAGAGGAGACAGAGGTCCCATTCCGTTAAATATCAAAACATATCCGCAAGACCAGGAATCTGTCAGATACGGTGGTGATGTAGTGCTTCAGTGCCGTGATGAAGGCCCTCGTCGTGCACCCGTGAGATGGATCCGAGAAGGTGGTAGGCCGATGAGGCCAAACTACCAGGAAAGAAAAGGACGACTGGAACTGTTTGGTGTTACCCCATCCGATAGTGGTGTATACATATGTCAGGCACCATCTTATCTGAGACAGCCTGGTGCGGAAGTTCGAGTTACTTTGGAAGTGGAGACGAGCCCTGTGACCGTGCGGCCAGTGTTCGGTGTTTGTAAGCCACATGAAGCCACTTGCGGTAACGGGCAGTGCATACCAAAATCGGCTATTTGCAACTCTGTTTTCGACTGCGCTGATCATTCAGACGAAGATGGCTGCGGAGCCAGTGGCCAGTGCGAACCGAACGAGTTTGTTTGCGCGAACCACAAGTGCATTCTTAAGACCTGGCGTTGTGACTCCGAGGACGACTGCGGCGATGGTTCTGATGAACTTAACTGTGGAACCCCAACTCCTGGAAGCCCTTGCTTGGCGGTAGAATTCTCATGTGCTTCTAACAACCAATGTATTCCGAAGAGCTTCCACTGTGACGGACAATCTGACTGCGTTGATGGCTCTGATGAAATCGGATGCGCTCAAGTATATATCACGAAACCCCCGCAACCTTCATACGTGAGATTGAATCCGGGCGACTCGTTGACTCTAAGATGTGAGGCCGTTGGTGTACCTGTTCCACTAGTCTCGTGGCGTCTCAACTGGGGACATGTTCCACCTCAATGCACCTTTACCAGTGACAACGGTATCGGAGTTTTGACATGTCCAAACATGCAGCCCCAACATAGCGGTGCGTATTCGTGCGAGGCCATCAATAATAAGGCTACGACATTCGCGACACCGGACGCAATCGTACACGTGAATAGAACCGATCCTTGCCCCGTTGGATATTTCAATAGCGATGCGCGTTCACAAAGCGAATGCATCCAGTGCTTCTGCTTCGGCGAGTCCACGCAGTGTCGCAGCGCGGATCTGTTTACGTACAACATGCCGACTCCTCTTGGAGAAGGCGGCACCAGATTCGTCACTGTCACTCATCAGGCCAGAGGCGACATCAGTATCGGCGCCCCGATGAACAACGAATACTTCTATCAACCTTTGAGGAACGGAGCTACTGTGACCAGAATAGTCCCCGGAGACATGGGCTGGTTCAAAGATGCTCATCCATACGTGACCTTACCAGAAACCTACAACGGTAACCAGTTAACTTCATACGGTGGTCACATCAAATACACCATCTCGCCTCACGGATCCGGATATGGCTCAGATGACACTGCACCAACCATAATCATCAAGGGGAAATACTTCACTCTGTTCCATTACTACCGCGGCGAGACGACTAAAACTATCAACATCGAAGCTCGTTTGACTCCCGAGAACTGGCTGATTCTGGACGAAAACGGCGTTCAAGCGCCAGCGCAGAGATCGACCATCATGATGACGTAG
Protein
MISITAKSCGIDDFTCNNGACIEGFRRCDGAVDCSEGEDEVNCECREDQFRCRSGSCIELRKRCDGYEHCSDRSDEENCNGTLSCPPEKFACSPTSSVPCAIRCNGFPECDGNEDEDNCPDEECSHQCDGKCLPDANICDSITDCSDGSDELHCAQCDGPDDYRCDTDECISRNWVCNGHFECPNGEDEADCNSTIVSTPTCDENSWQCRSGQCIPSSSYCDNVYNCYDRSDEADCLPSTPAYENEYPPIVSTTLSPYYTTTRRDVGSSNYDRRPENPYGSENQGTYSPYDDDARRPTTYSPYGPSSERPDPRRPYPPYGSVTTNRPDDRQDPYSSPPGGEYDPYGQGAGSPDDRRPPYSQPGNQDISPGGGSPYNPEPENQPDNREDPSGGQPGGEYNPYGQGAGGPDDRRPPYTQPGSQDVSPGGGSPYNPESGSQPNNREDPYGGQSGGEYDPYGRGAGSPDDRRPPYGQSGSQDISLGGGIPYNPESVRQPDNRDPYGGQSGGEYDPYGRGVSGTDDRRQPGSQDVGPGASGQGNSNQPENRPYRPESGNSVYETGEGQYGSGSQRGDRGPIPLNIKTYPQDQESVRYGGDVVLQCRDEGPRRAPVRWIREGGRPMRPNYQERKGRLELFGVTPSDSGVYICQAPSYLRQPGAEVRVTLEVETSPVTVRPVFGVCKPHEATCGNGQCIPKSAICNSVFDCADHSDEDGCGASGQCEPNEFVCANHKCILKTWRCDSEDDCGDGSDELNCGTPTPGSPCLAVEFSCASNNQCIPKSFHCDGQSDCVDGSDEIGCAQVYITKPPQPSYVRLNPGDSLTLRCEAVGVPVPLVSWRLNWGHVPPQCTFTSDNGIGVLTCPNMQPQHSGAYSCEAINNKATTFATPDAIVHVNRTDPCPVGYFNSDARSQSECIQCFCFGESTQCRSADLFTYNMPTPLGEGGTRFVTVTHQARGDISIGAPMNNEYFYQPLRNGATVTRIVPGDMGWFKDAHPYVTLPETYNGNQLTSYGGHIKYTISPHGSGYGSDDTAPTIIIKGKYFTLFHYYRGETTKTINIEARLTPENWLILDENGVQAPAQRSTIMMT

Summary

Uniprot
H9JRT0  
Pubmed
19121390   
EMBL
BABH01017200    BABH01017201    BABH01017202    BABH01017203    BABH01017204   
Proteomes
UP000005204   
PRIDE
H9JRT0   
Pfam
PF00054   Laminin_G_1        + More
PF00057   Ldl_recept_a
PF00052   Laminin_B
PF00047   ig
PF00053   Laminin_EGF
PF00008   EGF
PF02210   Laminin_G_2
Interpro
IPR001791   Laminin_G        + More
IPR000742   EGF-like_dom       
IPR036179   Ig-like_dom_sf       
IPR003598   Ig_sub2       
IPR013032   EGF-like_CS       
IPR023415   LDLR_class-A_CS       
IPR013320   ConA-like_dom_sf       
IPR013151   Immunoglobulin       
IPR007110   Ig-like_dom       
IPR036055   LDL_receptor-like_sf       
IPR002172   LDrepeatLR_classA_rpt       
IPR001881   EGF-like_Ca-bd_dom       
IPR000034   Laminin_IV       
IPR013783   Ig-like_fold       
IPR002049   Laminin_EGF       
IPR003599   Ig_sub       
IPR009030   Growth_fac_rcpt_cys_sf       
SUPFAM
SSF57424   SSF57424        + More
SSF49899   SSF49899       
SSF48726   SSF48726       
SSF57184   SSF57184       
Gene 3D
2.60.40.10     4.10.400.10    
CDD
cd00112  LDLa
ProteinModelPortal
H9JRT0  
PDB
3M0C     E-value=2.56043e-27,     Score=308

Ontologies

KEGG
101745012    no KO assigned | (RefSeq) uncharacterized LOC101745012
GO
GO:0005509   GO:0005515   GO:0004190   GO:0006508   GO:0007166   GO:0016020   GO:0019752   GO:0030246   GO:0007169   GO:0016021  

Topology

Length:
1085
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00361
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1085
 
 

Population Genetic Test Statistics

Pi
20.518479
Theta
21.771417
Tajima's D
0.006942
CLR
0.117785
CSRT
0.380580970951452
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
24402669 CINSACDYIFSVDSISR 95.24 2e-21
26822097 SGQCIPSSSYCDNVYNCYDR 100.00 8e-19
26280517 SAAQSAFDTSK 100.00 8e-19
27102218 GAGSPDDRRPPYGQSGSQDISIGGGIPYNPESVR 100.00 8e-19
26822097 GDRGPIPINIK 100.00 3e-17
26280517 SFFGVGNPFSTPVGQK 100.00 3e-17
24402669 SFGNECVMNNYNCEHKDTIRK 100.00 3e-17
27102218 RPPYGQSGSQDISIGGGIPYNPESVR 100.00 3e-17
28467696 SFGTPFNK 100.00 3e-17
26822097 CAVGYTR 97.06 2e-15
26280517 GADCCVIVFDVTAPNTFK 97.06 2e-15
24402669 GAGFIWSPIIDSK 97.06 2e-15
27102218 RPPYTQPGSQDVSPGGGSPYNPESGSQPNNR 97.06 2e-15
28467696 GAGPIEIGDEYWSWR 97.06 2e-15
26822097 RPENPYGSENQGTYSPYDDDAR 100.00 6e-14
26280517 RINHHPFQVSIDVMSDK 100.00 6e-14
24093152 RPPYGQSGSQDISIGGGIPYNPESVR 100.00 6e-14
28467696 RPPYGQSGSQDISIGGGIPYNPESVRQPDNR 100.00 6e-14
28556443 RPPYGQSGSQDISLGGGIPYNPESVR 100.00 6e-14
28556443 RPPYGQSGSQDISLGGGIPYNPESVR 100.00 6e-14
26280517 RPPTPISWENIPGKDAPK 96.77 7e-14
28467696 RPPYGQSGSQDISIGGGIPYNPESVR 96.77 7e-14
26822097 SAICNSVFDCADHSDEDGCGASGQCEPNEFVCANHK 100.00 1e-13
26280517 RPPPITDDSPVR 100.00 1e-13
24093152 RPPYSQPGNQDISPGGGSPYNPEPENQPDNR 100.00 1e-13
24402669 RPPYGQSGSQDISIGGGIPYNPESVR 100.00 1e-13
27102218 FVTVTHQAR 100.00 1e-13
28467696 RPPYSQPGNQDISPGGGSPYNPEPENQPDNR 100.00 1e-13
28556443 RPPYTQPGSQDVSPGGGSPYNPESGSQPNNR 100.00 1e-13
28556443 RPPYSQPGNQDISPGGGSPYNPEPENQPDNR 100.00 1e-13
28556443 RPPYGQSGSQDISLGGGIPYNPESVR 100.00 1e-13
28556443 RPPYSQPGNQDISPGGGSPYNPEPENQPDNR 100.00 1e-13
28556443 CEAVGVPVPLVSWR 100.00 3e-11
28556443 AVCTGTQGVPAGSIEWIR 100.00 3e-11
28556443 RPPYGQSGSQDISLGGGIPYNPESVR 100.00 1e-10
28556443 LTPENWLILDENGVQAPAQR 100.00 1e-10
28556443 RPLPASAESFDDLLIIESAR 100.00 1e-10
28556443 RPLPASAESFDDLLIIESAR 100.00 1e-10
26280517 RATDIMIAGK 100.00 2e-10
26822097 SADIFTYNMPTPIGEGGTR 96.15 3e-10
26280517 QSIFDIPVRPGAIK 96.15 3e-10
24093152 RPFFEEWK 96.15 3e-10
24402669 RPPPAKPYTEIK 96.15 3e-10
27102218 TDPCPVGYFNSDAR 96.15 3e-10
28467696 RPPTDEEIK 96.15 3e-10
26280517 CAAFDASGNGYVR 100.00 8e-10
27102218 SCGIDDFTCNNGACIEGFRR 100.00 8e-10
26280517 QDFIDIFMK 100.00 9e-10
28467696 QDNDNIGVEGYNTGYETSNGIK 100.00 9e-10
26822097 IEIFGVTPSDSGVYICQAPSYIR 100.00 1e-09
26280517 EDIVEAPSIER 100.00 1e-09
28467696 EDNSINTIAESAKK 100.00 1e-09
28556443 DPYGGQSGGEYDPYGR 100.00 1e-09
28556443 DVVLNSNAVDINSSIK 100.00 1e-09
28556443 LELFGVTPSDSGVYICQAPSYLR 100.00 4e-09
28556443 IYSGSIDVPIPAVR 100.00 4e-09
28556443 IYSGSIDVPIPAVR 100.00 4e-09
28556443 IYSGSIDVPIPAVR 100.00 4e-09
24093152 PYIYQEVIDIGGEAISR 100.00 5e-09
28467696 RQPDEWRPAER 100.00 8e-09
28556443 RPPYTQPGSQDVSPGGGSPYNPESGSQPNNR 100.00 8e-09
28556443 RPPYTQPGSQDVSPGGGSPYNPESGSQPNNR 100.00 8e-09
26822097 RPPYTQPGSQDVSPGGGSPYNPESGSQPNNR 100.00 2e-08
26822097 DQSGEWIGTCVR 100.00 5e-08
26280517 YMNVDVVK 100.00 5e-08
24402669 YTIQDDGHSDWVSCVR 100.00 5e-08
27102218 DAVDKGPIDQETAIAVVR 100.00 5e-08
28467696 YTISGGSVIVQNTQVINQR 100.00 5e-08
28556443 YTISPHGSGYGSDDTAPTIIIK 100.00 5e-08
28556443 TYPQDQESVR 100.00 5e-08
28556443 WERPDTNLYLVTNPFGGGSR 100.00 5e-08
28556443 WERPDTNLYLVTNPFGGGSR 100.00 5e-08
26822097 SQSECIQCFCFGESTQCR 100.00 1e-07
26280517 QIYEDKKSEVITNVVNK 100.00 1e-07
27102218 GDRGPIPINIK 100.00 1e-07
28467696 QPDDATHNIIK 100.00 1e-07
27102218 SCGIDDFTCNNGACIEGFR 100.00 1e-07
28467696 SCGIDDFTCNNGACIEGFR 100.00 1e-07
28556443 LTPENWLILDENGVQAPAQR 100.00 1e-07
28556443 LTPENWLILDENGVQAPAQR 100.00 1e-07
28556443 LTPENWLIL 100.00 1e-07
28556443 IQSCVSDDFSCK 100.00 1e-07
26822097 FPDECACK 100.00 4e-07
26280517 SFPNVIAYCISK 100.00 4e-07
24402669 SGPMTIEFNCR 100.00 4e-07
27102218 TINIEAR 100.00 4e-07
28467696 SGQCATNYEQTKAPNSYDIPVK 100.00 4e-07
26822097 SCGIDDFTCNNGACIEGFR 100.00 8e-07
26822097 ITPENWIIIDENGVQAPAQR 100.00 8e-07
26280517 NTGTFQTQEACER 100.00 8e-07
27102218 RDEVCNNINDCHDGTDEVDCAK 100.00 8e-07
28467696 SCGEECVIAVK 100.00 8e-07
28556443 RQPGSQDVGPGASGQGNSNQPENR 100.00 2e-06
28556443 RQPGSQDVGPGASGQGNSNQPENR 100.00 2e-06
26822097 RCDGAVDCSEGEDEVNCECR 100.00 4e-06
26280517 CDATADCPDGSDEHQCDETCR 100.00 4e-06
27102218 CDGAVDCSEGEDEVNCECREDQFR 100.00 4e-06
26822097 EGGRPMRPNYQER 100.00 1e-05
26280517 SQMTWIVR 100.00 1e-05
24402669 SQSCPSDEPCEVGCVCKR 100.00 1e-05
27102218 GPIPINIK 100.00 1e-05
28467696 SQSCPSDEPCEVGCVCK 100.00 1e-05
26822097 CEAVGVPVPIVSWR 100.00 1e-04
26822097 CEAVGVPVPIVSWR 100.00 5e-04
26280517 EAWEAIVAASR 100.00 1e-04
26280517 EAWEAIVAASR 100.00 5e-04
24093152 EDNSINTIAESAK 100.00 1e-04
24093152 EDNSINTIAESAK 100.00 5e-04
24402669 EDNSINTIAESAKK 100.00 1e-04
24402669 EDNSINTIAESAKK 100.00 5e-04
27102218 DAHPYVTIPETYNGNQITSYGGHIK 100.00 1e-04
27102218 DAHPYVTIPETYNGNQITSYGGHIK 100.00 5e-04
28467696 EDPSGGQPGGEYNPYGQGAGGPDDR 100.00 1e-04
28467696 EDPSGGQPGGEYNPYGQGAGGPDDR 100.00 5e-04
28556443 EDPYGGQSGGEYDPYGR 100.00 1e-04
28556443 EDPYGGQSGGEYDPYGR 100.00 5e-04
28556443 EDPSGGQPGGEYNPYGQGAGGPDDR 100.00 1e-04
28556443 EDPSGGQPGGEYNPYGQGAGGPDDR 100.00 5e-04
28556443 DPPQVDIWPQGER 100.00 1e-04
28556443 DPPQVDIWPQGER 100.00 5e-04
28556443 EDPSGGQPGGEYNPYGQGAGGPDDR 100.00 1e-04
28556443 EDPSGGQPGGEYNPYGQGAGGPDDR 100.00 5e-04
26822097 RPPYGQSGSQDISIGGGIPYNPESVR 100.00 6e-04
26822097 RPPYGQSGSQDISIGGGIPYNPESVR 100.00 6e-04
26280517 DPGATTGGEIIIGGSDPAHYR 100.00 6e-04
26280517 DPGATTGGEIIIGGSDPAHYR 100.00 6e-04
24093152 DPVFWMIMK 100.00 6e-04
24093152 DPVFWMIMK 100.00 6e-04
24402669 DPYCGWCSIENK 100.00 6e-04
24402669 DPYCGWCSIENK 100.00 6e-04
27102218 SQSECIQCFCFGESTQCR 100.00 6e-04
27102218 SQSECIQCFCFGESTQCR 100.00 6e-04
28467696 DPWDEPSKPK 100.00 6e-04
28467696 DPWDEPSKPK 100.00 6e-04
28556443 DAHPYVTLPETYNGNQLTSYGGHIK 100.00 6e-04
28556443 DAHPYVTLPETYNGNQLTSYGGHIK 100.00 6e-04
28556443 DASVYWSNPTPIR 100.00 6e-04
28556443 DASVYWSNPTPIR 100.00 6e-04
28556443 GPIPLNIK 100.00 0.001
28556443 EGQAPPNEGDYFLLR 100.00 0.001
26822097 YGGDVVIQCR 100.00 0.003
26280517 TCTIIIR 100.00 0.003
24093152 TDNIIR 100.00 0.003
24402669 TDIFNIYGEFIKNNNVIFNNAAK 100.00 0.003
27102218 GDISIGAPMNNEYFYQPIR 100.00 0.003
28467696 TDMVDEVTTQAPIFTTSIK 100.00 0.003
28556443 SGSIDVPIPAVR 100.00 0.003
28556443 SWLSLPPLK 100.00 0.003
28556443 TLDNVEMILLR 100.00 0.003
28556443 AVTLGTEYELICR 100.00 0.003
26822097 TDPCPVGYFNSDAR 100.00 0.018
26280517 EYQDIKEEMDQIVGR 100.00 0.018
24093152 FAAIAEEFYK 100.00 0.018
24402669 FAAVAAAVAPSAAAAPAEK 100.00 0.018
27102218 IYSGSIDVPIPAVR 100.00 0.018
28467696 FACDGIK 100.00 0.018
29197581 YVVDCDYQPK 100.00 0.018
26822097 TTTAVQFNVPNIVNQVR 100.00 0.027
26280517 EDPYGGQSGGEYDPYGR 100.00 0.027
24402669 EGGNIKDTAIK 100.00 0.027
27102218 IVPGDMGWFK 100.00 0.027
28556443 EDPYGGQSGGEYDPYGR 100.00 0.027
28556443 DLPVTHYSAR 100.00 0.027
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