SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00568
Pre Gene Modal
BGIBMGA012348
Annotation
PREDICTED:_solute_carrier_family_35_member_B1_homolog?_partial_[Bombyx_mori]
Full name
Solute carrier family 35 member B1 homolog      
Alternative Name
Protein medial glomeruli
Location in the cell
PlasmaMembrane   Reliability : 4.972
 

Sequence

CDS
ATGCTTCAAGAAAAAGTAACTAGAGGAGTATATGGTAATAATGAGAAATTTACGGCCACCTTATCATTAGTTCTCGTACAATGTACAGTGAATTACATCTTTGCTCAAATTTTAATGTTATCTTGGAAACATGAAAAAGACAATACCAAGAAAATTTACTACTTCTCTTCTGCTCTAACGTATCTTTTGGGTATGGTCTGCTCTAACATGGCGTTGCAATGGGTCAACTACCCTACTCAGGTTGTGGGAAAAGCGGCAAAACCCATCCCAGTCCTGATGCTCGGTGTCCTTCTTGGTCGCAAGTCATATCCTCTGAAGAAATACCTGTTTGTATTTCTTATTGTTATTGGTGTTGTGCTATTCATGTACAAAGACCAAAAGAGAGTAACTGATGAAACACCAGGCATCGGAATTGGAGAACTACTCTTGATATTGTCACTTCTCATGGATGGCCTGACAGGTGCTGTGCAGGAACGGATTAAAAGCGAACATTCTCCAACTGCGTACGCAATGATGTTGAACACGAACTGGTGGTCTACTATAATTCTAACGATCGGCGTGGTATTGAGCGGTGAAATATTCCAGTTTATCCGTTTCGTGTCTGTGTACCCCGAAGTCATCGTATTTATCATCAGCTTGGCTCTAATGGGAGCTCTAGGCCAACTGTTTATATTTTATATGGTTTCGGAATTCGGTCCACTGCCATGCTCGGTGGTGACGACCACTAGGAAATTTTTCACTGTCCTAGCATCGGTTATATTCTTTGGCAACGTTCTTATACTGCGTCAATTTATCGGAGCTGCTCTTGTGTTTTCTGGTTTGTTTTTGGATATCTTCTACAGCAAAGGAAAGGGTCAAACACCCAAGCGGGCTATAGACAAATGA
Protein
MLQEKVTRGVYGNNEKFTATLSLVLVQCTVNYIFAQILMLSWKHEKDNTKKIYYFSSALTYLLGMVCSNMALQWVNYPTQVVGKAAKPIPVLMLGVLLGRKSYPLKKYLFVFLIVIGVVLFMYKDQKRVTDETPGIGIGELLLILSLLMDGLTGAVQERIKSEHSPTAYAMMLNTNWWSTIILTIGVVLSGEIFQFIRFVSVYPEVIVFIISLALMGALGQLFIFYMVSEFGPLPCSVVTTTRKFFTVLASVIFFGNVLILRQFIGAALVFSGLFLDIFYSKGKGQTPKRAIDK

Summary

Description
Probable sugar transporter.
Similarity
Belongs to the nucleotide-sugar transporter family. SLC35B subfamily.
Keywords
Complete proteome   Endoplasmic reticulum   Membrane   Reference proteome   Sugar transport   Transmembrane   Transmembrane helix   Transport  
Feature
chain  Solute carrier family 35 member B1 homolog
EMBL
KQ460953    KPJ10296.1    AGBW02013270    OWR43692.1    KQ459605    KPI92032.1    + More
NWSH01003703    PCG65906.1    KZ149976    PZC75938.1    UFQT01000617    SSX25801.1    KQ983219    KYQ46527.1    KK852914    KDR13884.1    GGMR01017498    MBY30117.1    ABLF02037251    ADTU01001295    KQ980989    KYN10554.1    GL888217    EGI64725.1    KQ977726    KYN00281.1    KQ435752    KOX76186.1    GFDF01009260    JAV04824.1    GFDF01009301    JAV04783.1    PYGN01000705    PSN41949.1    KK107796    QOIP01000013    EZA47620.1    RLU15225.1    GL452770    EFN76773.1    GGMS01017981    MBY87184.1    ATLV01011018    KE524633    KFB35834.1    GGFK01003152    MBW36473.1    AJVK01013628    AJVK01013629    ADMH02002026    ETN59885.1    CVRI01000047    CRK97155.1    GEZM01035967    JAV83078.1    GDAI01001556    JAI16047.1    BT126430    AEE61394.1    LRGB01001253    KZS13272.1    GECU01033407    JAS74299.1    GDIQ01089908    JAN04829.1    GGFM01002267    MBW23018.1    GGFM01002387    MBW23138.1    GDHF01013388    JAI38926.1    GECZ01001085    JAS68684.1    GAMC01005569    JAC00987.1    GGFJ01007194    MBW56335.1    GAKP01008102    JAC50850.1    GL732547    EFX80445.1    KA648151    AFP62780.1    GDRN01089715    GDRN01089714    JAI60604.1    GANO01002847    JAB57024.1    CH940650    EDW66923.1    JH431739    KZ288460    PBC25478.1    DS231922    EDS26665.1    GEBQ01023099    JAT16878.1    CH916369    EDV93610.1    NNAY01002542    OXU21100.1    GFDL01009551    JAV25494.1    IACF01004314    LAB69908.1    KQ971342    EFA03644.1    GEDC01022380    GEDC01004478    GEDC01003594    JAS14918.1    JAS32820.1    JAS33704.1    AXCM01013182    GFDG01000422    JAV18377.1    CP012526    ALC45702.1    AXCN02000206    CAEY01000474    AAAB01008987    EAA01729.3    GFDG01000421    JAV18378.1    KK122334    KFM82533.1    GAPW01002475    JAC11123.1    OUUW01000014    SPP88397.1    JXUM01063551    JXUM01063552    APCN01000875    CM000070    EAL28806.2    CH479185    EDW38007.1    CH933806    EDW15736.1    CH902623    EDV30199.2    CM000160    EDW96228.1    RCHS01000646    RMX57542.1    CH964272    EDW84232.1    CH954181    EDV48286.1    GFDG01003322    JAV15477.1    CM000364    EDX12125.1    CH480853    EDW51603.1    AE014297    BT031262    CH477524    EAT39553.1    APGK01037935    KB740949    ENN77194.1    GDIP01184746    GDIQ01218359    JAJ38656.1    JAK33366.1   
Pfam
PF08449   UAA
Interpro
IPR013657   UAA       

Ontologies

Topology

Subcellular location
Endoplasmic reticulum membrane  
Length:
294
Number of predicted TMHs:
7
Exp number of AAs in TMHs:
151.29669
Exp number, first 60 AAs:
28.59572
Total prob of N-in:
0.31042
POSSIBLE N-term signal
sequence
outside
1  -  19
TMhelix
20  -  42
inside
43  -  54
TMhelix
55  -  77
outside
78  -  107
TMhelix
108  -  123
inside
124  -  134
TMhelix
135  -  157
outside
158  -  176
TMhelix
177  -  199
inside
200  -  205
TMhelix
206  -  228
outside
229  -  257
TMhelix
258  -  280
inside
281  -  294
 
 

Population Genetic Test Statistics

Pi
22.49497
Theta
21.32839
Tajima's D
-1.639341
CLR
0.004308
CSRT
0.0463976801159942
Interpretation
Uncertain
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