SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00567
Pre Gene Modal
BGIBMGA012244
Annotation
PREDICTED:_coiled-coil_domain-containing_protein_AGAP005037_isoform_X3_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.559
 

Sequence

CDS
ATGTCAGAAAATAATAAAAAGAAAACCGGAAGTTTCCGGAAGTTGTTTCCAAATTTATTTTTCTCGAGTAAAACAAGAGGAAAGACGAGCAAAGATTCGAAGTCGACCTTGAAATGTAACGCTGATTTGTCAATAAGCAATCAATATCAGAGCCCACGATCGATAAGATCAGATAAGTATGCTCAAGGAGACGATAGCGAGCGAATATATGAAAATTTAACGACAACAAACATACAATCCGATAATGAAACCTTGAACATCGATATACCGAGCAATCATTCGTCGAGTAGCACGCTTGTTTCTGAGAGTGTCAAAAATAGAAATCTCCATTTAAACGAACCGGTTGCACGTTTCGTCGGAAAAGAGTGCTCGCATTACGCGGCCAGACCGCAGGTACCTCCGAAGCCCCAGAACGAAATGGTTCATCCGACGGCGAACACTAATTACGATAATTCACTCTACCCAGACGTTTATTACCATTCACTCGAGAAGCTGTCTGATAAAATATCGCCTTTGGATGAAATTGAAATTTATAAGGCGTCGCAGGCTCAAGTGAATCCTGCATCTGTTGGTGCTGAAATAAAAAGAGTCAGCACAAAATTCTTAATATCTCCGAAAAAAGAAGCAGAAGTGCGTACTATACAGCCGACTAGAGCTCGAAGCCTGTCTCTAGAAAAGGAAGGAAATTGTCATGAAGTAAAAAAGGAAGTAAGCCAGACAAATGTGAAGAAACCATATAATTACTCAGCACCGACGTCTCCAATGCCCGTAACGCATAAGATACCATCCATGCCTAAGACGGTTTCTCCATACGGCCATTTGAGAAGAAACATGATCGAAATCGAGGAAAAAAGGAATTCGTTGAACAGAACCGGTCAACGCAACAGACCTTTGTCACCATCAAGATCGGATTTTAATTACCAGTCTACTCCTACATCACAAAATGAAGGGCCTAGACCTGAAGAAAACGAAAAAGAAAAAACGAGGCAAAAAGTTGAAGCGTTTTACTGGCAAAAATTGAGAGAAATGCGCCAGAAAGAAGATGAATATTTGCTTAAGCAGTCACTAAGAGGTTCTGCTCGAAATGCTTCTACATTATCGAATTGTAGTTCTCCGAATTCATTTACTGTAGAACCTAGAAGCTACAGCCTCCCACGTGGTCAAGATTTCCGAAGTTACACGAAACAACCAGTTTATGCTCAAGCTTCTTTTAAAAGAGGAGCCCCCGAAAGACGCACTGATACTTTTATAAAAAATCGTTCCTCTATGGAACCAGAAATCATTTATAGGAATCCAGAAAAATTACTTACTTTATCGCCCATTTCATTGCAAGAAAGGAGAGTGTTTCAACCTGATATGCACAATAAACAAGTTAATCTTGAGGAACAAAACGTCAAAAACAACAAAGTTAATTACTTAGGACATAATCCCAGGAAAGTGTTGAGTGCTCCACAGTGTGTTAATTTGACTGATAATGTAAGGACTCCACCCTTGCCTCCTGTTAGAACAACAAGTGTTGGTGTCGGAAAAAAAACGCATGTCATAAACAATACGAAATTAATTCATTTACCTGGAGGAGGCCATTCTGTATATTCAGAGTCGGAGAGTGGCTCGGAAGCTGGCGAAATACAGAGAATTTTCAACGAAAATTCAAAAAAAGGTATGTTCGTTTTGTATTTTTTTTTTCATTTCTTTGTAACACAAGGGAAAATGCACGCTGTTGTTTTGAATCCTATTTTCAAAGTACCTATTCGAAGATAA
Protein
MSENNKKKTGSFRKLFPNLFFSSKTRGKTSKDSKSTLKCNADLSISNQYQSPRSIRSDKYAQGDDSERIYENLTTTNIQSDNETLNIDIPSNHSSSSTLVSESVKNRNLHLNEPVARFVGKECSHYAARPQVPPKPQNEMVHPTANTNYDNSLYPDVYYHSLEKLSDKISPLDEIEIYKASQAQVNPASVGAEIKRVSTKFLISPKKEAEVRTIQPTRARSLSLEKEGNCHEVKKEVSQTNVKKPYNYSAPTSPMPVTHKIPSMPKTVSPYGHLRRNMIEIEEKRNSLNRTGQRNRPLSPSRSDFNYQSTPTSQNEGPRPEENEKEKTRQKVEAFYWQKLREMRQKEDEYLLKQSLRGSARNASTLSNCSSPNSFTVEPRSYSLPRGQDFRSYTKQPVYAQASFKRGAPERRTDTFIKNRSSMEPEIIYRNPEKLLTLSPISLQERRVFQPDMHNKQVNLEEQNVKNNKVNYLGHNPRKVLSAPQCVNLTDNVRTPPLPPVRTTSVGVGKKTHVINNTKLIHLPGGGHSVYSESESGSEAGEIQRIFNENSKKGMFVLYFFFHFFVTQGKMHAVVLNPIFKVPIRR

Summary

Ontologies

GO

Topology

Length:
586
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
15.12399
Exp number, first 60 AAs:
0
Total prob of N-in:
0.04510
outside
1  -  586
 
 

Population Genetic Test Statistics

Pi
18.663758
Theta
17.305651
Tajima's D
-2.095576
CLR
0.100871
CSRT
0.00809959502024899
Interpretation
Uncertain
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