Gene

KWMTBOMO00562

Annotation

PREDICTED:_uncharacterized_protein_LOC106133913_[Amyelois_transitella]

Location

Bomo_Chr1(+):16618559-16621681      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.817 Nuclear   Reliability : 1.627

CDS

ATGTGGTGGTATCATTCATGTCAGTCGTGGAACGGCAAAACTGGAGAATGGCAGATTTGGGTAAACGCTGAACGTGTTGGAAGAGGGTTCCACAATCGGTTGGTCGGTCATATTATCAAAGGAGGAGGAGTTGCTATTACTGGACAAGAACAAGCTTTGATTTATAACAAGGACAACGTCGAACAACTACAAAGACAAGCAGGTTTCATTGGTGAAATAACAATGCTGCAACTTTATCATGTCGCTTTAACTGCTGGCAAGGCGCATAAAGATCACAAACACCATCACGTACACCACTTCAGACACGACGGAACTCCGTTCGAAACGGCCACAGAGGCAGCAAATGAACTTCCAGAGCCGCAAGCCACACCTCTTGGAAACGGAAACTTCCTTATCGGCAACCAACTGCAGCGAGCGCCTAATCTAAACCTCGCAGGCTCCCAGCAAATGGTACCAGTACACCTACCTAACGGTCTTCAATTGCAACAGGAATATGTAAACGGACAACTTGGCAATAGAATCGTATCGGAACAGTTGTTGAATAGCGTTCAATTACCAGACATGAGAGGAACTCCAGTATCCCAATTCACTTTAGTACCGGTTACATCAACGAGAAAAGATAAGCGTGGCCTCGTTGCCCTGTCGGATGGCTCCATAGTAGATGAGGCTTTATTAAGCCCCACAATCCTTGATAAAGATGAGGAAGCTCTATTTCAAGAGTCGCTGCTACATGGTCTTGCCGGTGTTGTTGGTAATCTACCAGTACAGAATGTACAAAAAGAGACTGTGAGTATTTTTTGTGATAACGAAACTGCAAAATACGATAATTCTTAA

Protein

MWWYHSCQSWNGKTGEWQIWVNAERVGRGFHNRLVGHIIKGGGVAITGQEQALIYNKDNVEQLQRQAGFIGEITMLQLYHVALTAGKAHKDHKHHHVHHFRHDGTPFETATEAANELPEPQATPLGNGNFLIGNQLQRAPNLNLAGSQQMVPVHLPNGLQLQQEYVNGQLGNRIVSEQLLNSVQLPDMRGTPVSQFTLVPVTSTRKDKRGLVALSDGSIVDEALLSPTILDKDEEALFQESLLHGLAGVVGNLPVQNVQKETVSIFCDNETAKYDNS

Uniprot

H9JS36   A0A2H1WHJ7   A0A2W1BWM5   A0A2A4K5F6   A0A194QZ97   I4DIJ7   + More
A0A194PF93   A0A0L7KNH7   U4URS9   D6WJQ4   B4L773   B4NCS8   A0A0L0BU70   T1PBT1   A0A1I8NBN5   A0A1I8P043   B4PY49   B4MB43   A0A336MZ13   B4I9H3   B4JLW2   Q9V3N9   A0A336MVY7   Q8MZ27   O76933   A0A1W4VF43   B3MYL7   A0A2H8TIG8   A0A1A9VCQ0   B3P9K9   A0A1A9ZEN2   A0A1B0FCS4   A0A0M3QYT6   A0A3B0K0A6   A0A1A9XBQ2   W8B0M4   Q29J21   W5J9I9   A0A182PRF8   A0A2M3Z1P1   A0A2M3Z1E8   A0A182NLU9   A0A182KB43   A0A182HPF3   A0A182SL46   A0A182LB38   A0A182X0Y6   A0A182VIF3   Q5TSR3   A0A182WM96   A0A182FL97   A0A034WWH0   A0A182RUW0   A0A182MIT4   A0A182YJ31   A0A0A1X2C4   A0A182U7J2   A0A182J206  

Pubmed

19121390    28756777    26354079    22651552    26227816    23537049    + More
18362917    19820115    17994087    26108605    25315136    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    24495485    15632085    20920257    23761445    20966253    12364791    14747013    17210077    25348373    25244985    25830018   

EMBL

BABH01017157    ODYU01008715    SOQ52550.1    KZ149925    PZC77597.1    NWSH01000126    + More
PCG79299.1    KQ460953    KPJ10300.1    AK401115    BAM17737.1    KQ459605    KPI92036.1    JTDY01008301    KOB64636.1    KB632335    ERL92785.1    KQ971343    EFA04479.2    CH933812    EDW06219.1    CH964239    EDW82637.1    JRES01001343    KNC23533.1    KA645418    AFP60047.1    CM000162    EDX00922.1    CH940655    EDW66452.1    UFQT01004165    SSX35546.1    CH480825    EDW43854.1    CH916371    EDV91723.1    AE014298    BT050466    AL031025    AAF45658.1    ACJ13173.1    CAA19835.2    UFQT01002013    SSX32407.1    AY113394    AAM29399.1    Y17570    CAA76791.1    CH902632    EDV32711.1    GFXV01002110    MBW13915.1    CH954183    EDV45505.2    CCAG010011293    CP012528    ALC48179.1    OUUW01000011    SPP86763.1    GAMC01015962    JAB90593.1    CH379063    EAL32481.3    ADMH02002077    ETN59525.1    GGFM01001607    MBW22358.1    GGFM01001601    MBW22352.1    APCN01002994    AAAB01008900    EAL40449.3    GAKP01000270    JAC58682.1    AXCM01002358    GBXI01009402    JAD04890.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000037510    UP000030742    + More
UP000007266    UP000009192    UP000007798    UP000037069    UP000095301    UP000095300    UP000002282    UP000008792    UP000001292    UP000001070    UP000000803    UP000192221    UP000007801    UP000078200    UP000008711    UP000092445    UP000092444    UP000092553    UP000268350    UP000092443    UP000001819    UP000000673    UP000075885    UP000075884    UP000075881    UP000075840    UP000075901    UP000075882    UP000076407    UP000075903    UP000007062    UP000075920    UP000069272    UP000075900    UP000075883    UP000076408    UP000075902    UP000075880   

PRIDE

H9JS36    Q9V3N9    Q8MZ27    O76933   

Pfam

PF00354   Pentaxin

Interpro

IPR013320   ConA-like_dom_sf        + More
IPR001759   Pentraxin-related       

SUPFAM

SSF49899   SSF49899       

ProteinModelPortal

H9JS36   A0A2H1WHJ7   A0A2W1BWM5   A0A2A4K5F6   A0A194QZ97   I4DIJ7   + More
A0A194PF93   A0A0L7KNH7   U4URS9   D6WJQ4   B4L773   B4NCS8   A0A0L0BU70   T1PBT1   A0A1I8NBN5   A0A1I8P043   B4PY49   B4MB43   A0A336MZ13   B4I9H3   B4JLW2   Q9V3N9   A0A336MVY7   Q8MZ27   O76933   A0A1W4VF43   B3MYL7   A0A2H8TIG8   A0A1A9VCQ0   B3P9K9   A0A1A9ZEN2   A0A1B0FCS4   A0A0M3QYT6   A0A3B0K0A6   A0A1A9XBQ2   W8B0M4   Q29J21   W5J9I9   A0A182PRF8   A0A2M3Z1P1   A0A2M3Z1E8   A0A182NLU9   A0A182KB43   A0A182HPF3   A0A182SL46   A0A182LB38   A0A182X0Y6   A0A182VIF3   Q5TSR3   A0A182WM96   A0A182FL97   A0A034WWH0   A0A182RUW0   A0A182MIT4   A0A182YJ31   A0A0A1X2C4   A0A182U7J2   A0A182J206  

PDB

3FLT     E-value=1.94341e-05,     Score=113

KEGG

101736996    no KO assigned | (RefSeq) uncharacterized LOC101736996

GO

GO:0030246  

Length:

277

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0877000000000001

Exp number, first 60 AAs:

0.02322

Total prob of N-in:

0.08637

outside

1  -  277

 

 

Pi

12.754122

Theta

14.470132

Tajima's D

0.05614

CLR

0.125133

CSRT

0.39618019099045

Interpretation

Uncertain