SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00558
Pre Gene Modal
BGIBMGA012344
Annotation
hypothetical_protein_KGM_08834_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 3.807
 

Sequence

CDS
ATGACTCAACCTAAACAAGTAAAAATTACAAGTCGAGGTACATCTAAGAAAAACAAAGAGCACAGATTCTACAGAAATGTTGATGATCAAAATAGTGATGAAAGTAGTAATAGTGTTGAAGAAGTCTTGAAACCACAACCGTTTTCTTTACCGAAAAATACAAAAAGTCTTAAATATTCACCACAAGTCACGCTTCAACACAATAATCTCCTAACCATATTACCTTTTTTAAAATCACTAGAATATTTCTTTGAAGATTCACAAAATACCGAGTCAAAAAGAGTTGAAGATATGTATACAAAAAGTTTATCAAACGGGAACAAATGGCACAATGTAAAGACTTACAGCAACGATTTTACACCGCGACAAATCAATATGGATTCTGATGGAAAATCTGGGTTCGACAAAAAGATTTCTGCTTTCAATAAAAAGTATCCATCGGCCCTGGTTAAATATAGAAATCAAAATCACAAACTTGATAAAAACGAGGAAGCAACCCTTCTGAAAGGACGTGAATTGGCTGTGGAAGTATCAAACCAGTCTGATTCTAATAAAAATTCAATATCCATACTTAAATATAATCACGGTTTTCTTCCCGAACACGAGAAGAAAGTTAAAATCTCTGATAAACTTAATTTAGTGATATCCGGGAACTCGAAAGCCCGGATCAACAATAACTTCAATAAAAACGTTAAATTAGGCAACGCGTTGAATGAACGTAATGTTATTGGCGTAGATGAAGAACAGAAGAAAAAGAGTTTCGTTGGGGGTGACGAAACAGTTCCTGATATAAATAGGTATAGATCAGATTTAGACAAGGAAAGCGTGAGGATTCCTGGATCTTTAGGACCGAGAGTATGTAAAAACGTGGAATTATATGATCGTGTACTATACGTTCAACCAGATGAAAGTATTGACATGACGCATATTTTGTCCCCTGTCAGGGCTAAGAATGTTGGCATAGAATTTATAGTACAGAACTACAAAAAATGTTCAATGGTCGATTCAACGATGAACAACAACGAAATGCTTTTTATTGATTGGAATAAAACTCCAGTTAGATTGTTTGGTGGGGCTCATACAAAAACTACTACAGATCTTTGTGGATTCTTCTAA
Protein
MTQPKQVKITSRGTSKKNKEHRFYRNVDDQNSDESSNSVEEVLKPQPFSLPKNTKSLKYSPQVTLQHNNLLTILPFLKSLEYFFEDSQNTESKRVEDMYTKSLSNGNKWHNVKTYSNDFTPRQINMDSDGKSGFDKKISAFNKKYPSALVKYRNQNHKLDKNEEATLLKGRELAVEVSNQSDSNKNSISILKYNHGFLPEHEKKVKISDKLNLVISGNSKARINNNFNKNVKLGNALNERNVIGVDEEQKKKSFVGGDETVPDINRYRSDLDKESVRIPGSLGPRVCKNVELYDRVLYVQPDESIDMTHILSPVRAKNVGIEFIVQNYKKCSMVDSTMNNNEMLFIDWNKTPVRLFGGAHTKTTTDLCGFF

Summary

Pfam
PF00354   Pentaxin
Interpro
IPR013320   ConA-like_dom_sf        + More
IPR001759   Pentraxin-related       
SUPFAM
SSF49899   SSF49899       

Ontologies

GO

Topology

Length:
371
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00246
Exp number, first 60 AAs:
2e-05
Total prob of N-in:
0.04568
outside
1  -  371
 
 

Population Genetic Test Statistics

Pi
17.53057
Theta
13.238361
Tajima's D
1.382248
CLR
0
CSRT
0.770361481925904
Interpretation
Uncertain
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