Gene

KWMTBOMO00554

Pre Gene Modal

BGIBMGA012339

Annotation

PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]

Location

Bomo_Chr1(+):16440349-16461353      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.817 PlasmaMembrane   Reliability : 1.177

CDS

ATGAACATGTCGACCGAACGACTAGACATGATTCCCGGAATTGATCACAATGTGATGAAAGAGAACGCTTTGTTCCTCCTCGATTTGGCTCCACTCACTGATTCAGAACCTCTAAGCGTGTCTCCATGGAGCGAGAACTTGAGTCGAAGCCCCCCGACTTCGCCGGGGAGCGTATGGCAACCGGCGCCTCCCTTCCAATGCCTACAAGCACTCGGCGCTGAGCCTAAAGAGAACGACAACAACGACGCCGCCAAGTATCACTCGCTAGGACGTCCGCAACCCCCTGCCATCGCTCCTACAGTGTCGAATTTCGCCGCTCCGGAGGCCAGCCTTGGTTTCCAGCCCCGAGTCCACCGTTCTGTGTCTATGGGACAAGCCGGAGGAGACCTCGCGGCAGCCGCCCGACCTCTGCTCACTCGCAAGTTGCGTAGCGATTCGCATGACACCGCCACCGGTAGTGGATTGTCACTGCTCTCGCAACCGAGCAAGGCGCTGAAGGGTCTACTCAGCTGCGGCGATTGGAGTGCCACGGACTGTCCTTTGTCCGCATTTGAAGCCCCTCGACTAGACTCCAACATTATAATGAAAAGGCCGGTGCTGAGCTTCGTGCTCGCAAAACGCGATTTGGCCGCTCACAGAGAGAAAATGGACGCGGCCGTCAGGATTAACATTGTCAGACAATACGCGTTTGAGGCCCTCAATTGGCTGCTTCGTTCAGCGACACAGCCAATCTGCGCCCACGATGTTATGTGGTGGTTCTGTACAGCTTTGGAAAAGTTTGCCAGGATCGTACCACCACCGCACATTGTTGAAGATAATAAGGAGAATGCAGTAGCAGAGCCGATACGCACGGTCCCGCCAACCGCTTCGACGTCCGCCATCTGCCCCGGCGGCCGAGCAGCCCGCGGCGCCCGAGCTGCTTTCCACTCGTTCCTGGGCTCCGTCAGTACTTTAGCACCATCGCTACCACACGCCAGTGCCGCGAGTCTGCAGGCCATACGATGCTGGGCGCTCCACTACTCCAGCCACGATCGGGCTTTCTTGCACAGATCGCAAGTGTTCAGTGTAATCAGCAAGATATTATCTCGTTCTGAGGAAGGCGTCCACGACGACGGCCCACATTGTGCCATACACGACAGCTTCCATAGCTATTTGAAGGAGAATCATGTATGGAGCTCTTCCGACGTGACTGGCTGGTGCGATATTACGGTATCTTCACGTCAAGGCATGGCCGGCGCCTTAACCGACGGCAGCACGGAGACGTTCTGGGAATCAGGCGACGAAGACAGGAACAAAGCAAAGTGGATACAAATCTCTTACCCGGGAGGCTCGCACGATGATCGCCCGCACATTGTGTGCGTCCACATCGATAACACAAGGGACACTGTGAACAAGACGCTGCTGATGACGTTCCTGTACAGCTCAGGATCCACTGAGTTGATCCACATGCAAGACATAGAAGTCGATCCGAAGGTCGCTACTTGGCTCTGCTATACTTTACCACGTGTGTCTACCACGTCGCTGCGCGTTCGATGCGAGCTCCGCGGTCCCGAAGCGGCGGTTCGAATCCGCCAGGTCCGGGTCCTGAGCGCGCCGACGCTCCTCCATTCAGCCGCCGTGACAGCGCCGCAAGTGTTGCACGGACTCTGCGAAACGGACACCCTGCGAGTTTTCCGCTTGTTGACTTCTCAGGTGTTCGGGAAGCTCTTGGAATGGGAGCAGTCTAGCGACGCGAGCGCCGAAGCCGCGGTAGCAATCGACGATGGAGTTGCCAACGACGACAGCGATCTCAGAGAGCACGTTGTTGGCATCCTATTCGCTGGACACAAACTTACATCTCTGCAACGACAAGTGATGTCTCATATAGTAAGTGCGATCGGATGTGAGACTGCCCGCGTGCGCGATGATTGGGAGACAACTCTGCTTTGTGTCGAACCCACGGATAGTGAATGGGAGGAGTCGCCAGCCGCCAAACACGTGGGGTCGCAGCAGGACAACTACTGCTTTGAAATGCTCTCGCTGTTATTGGCACTCAGCGGCAGTGCAGTGGGTCGAGTACATCTTGCTCAGCGCACGGAACTACTATCTGACTTGTTATCTCTGCTTCACACTGGTAGCGAACGCGTACAAAGACAGGTAATATCGCTCTTACGTCGATTGGTCATAGAGCTACCGCCCCAGAAGATGTTAGCGGCCGTCAATTATGGTTCCGATCCGATTAGCAGGGTAACTTTACTCGACCATCTGGTTTGCTATTTGGGCAAAGCGATCACAGTTCAAATGAAGGTGAAAGGTTCAAGTGGATCGGCCCCAGCTACCGTTATGATGGGGGGCAGTATGGTGTCCTTGTCCGCGAGTAATTGGTTCATGAGAGGCGAGACTACCAAAAAACACGCACATTTGGTAGCTAAACTTCTATCTGACATGGCAGAGGATAAATTGGCTGGTTCATGGGGCCTAGAGACACGTACCCAATTAGCCAACTACGTATGCGCCATATCGCAAGTATCCGAAAAAGAGAGACAGCCGGCGCTTTGCATCGCGTCCCCCACTATCTGGATGGCGCTAGCTTCCCTGTGCGTGTGTGAACAATCACATCTAGATCTCGTCAACAGTTCTGGAGACGGGCGCGGAGCTCGTGGTCGAGACTCTTCCTCCGAGACTCGTCCTCTGTGCGCCAACCACGACGACGGCGCCACAGCGGCGGTCATAGACTGCCGCAATTGTGGACCGCTCTGTGCTGAATGCGATCGATTCTTGCACCTAAACAGGACCGCCAGGACTCACCACAGACAGATCTGCAAGGAGGAGGAGAGCGCTATACGCATCGACATACACGAAGGCTGTGGACGCGCGAAACTGTTTTGGCTATTGCTCCTGGTCGACAGGCGTACGCTGAAAGCCTTAGCCGAGTTCAGAGGAATGGAAGGTGGAGTCTGTGAAGCCGGACCATCATCTGAGGGACCGGCCGTGGCTTCGGGACCGGTGGCTCCCTCTGGAACGTGTCGCTTTTGCGGGGCCAGAGAATCTACCGGCATACTCACCATCGGAAATATCTGCGCCGATCAACAATGTCAGGACCATGGTCGGGAAGCATGTAATGTCATCCTCGCTTGCGGTCACCTGTGCGGTGGAGTTCGGGGAGAGCAAACCTGTCTGCCGTGCCTACATGGGTGCGCGGGCGTCTCAGCTGGTGAGGCAGCGCCACTGAGACAGGACGCGGACGATATGTGCATGATTTGCTTCACTGACCCCTTGCAGGCCGCCCCTGCGATACAGCTAACTTGCGGGCATGTGTTCCATCTGCACTGCTGCAGGAAGGTGCTCGTCAATAAGTGGAACGGTCCCAGGATTAGTTTCTCGTTCTCGCAGTGCCCAATTTGCAAGGAGGACATAAACCACTGGACCCTTGAAGAGTTGTTAACACCTATCAGGCAACTGCGTGATGAAGTGAAACGCAAGGCACTAATGAGACTCGAGTACGAGGGCCTGTCTGCTCCGGGCGGGACCAAAGGACGCAATGTTTCCGATCCGGCTTCCTACGCCATGGACAGATATGCTTATTACGTCTGTCATAAATGTGGCAAGGCCTATTTCGGCGGGCTGGCTCGTTGTGAGGCCGAGTCGAATGGCTGGTGGGAGCCGGCTGAGCTCGTGTGCGGCGCTTGCAGTGACGTCACCGGCGCTAGGACTTGCCCGAAACACGGAGCCGACTTTCTCGAGTACAAATGCCGGTATTGCTGTTCGGTTGCAGTGTTCTTCTGCTTCGGCACGTCGCACTTCTGCAACGCCTGCCACGACGACTTCCAGCGCGTCACACACATACCGCGACATCTGTTGCCTCAATGTCCAGCAGGTCCTAAAGGTGAACAGCTGCCGGGTACATCGGACGAGTGTCCTCTGCACGTGCAACATCCGGCGACCGGCGAGGAGTTCGCGCTCGGCTGCGGCGTGTGTCGGCACGCGCAAGGCTTCTAA

Protein

MNMSTERLDMIPGIDHNVMKENALFLLDLAPLTDSEPLSVSPWSENLSRSPPTSPGSVWQPAPPFQCLQALGAEPKENDNNDAAKYHSLGRPQPPAIAPTVSNFAAPEASLGFQPRVHRSVSMGQAGGDLAAAARPLLTRKLRSDSHDTATGSGLSLLSQPSKALKGLLSCGDWSATDCPLSAFEAPRLDSNIIMKRPVLSFVLAKRDLAAHREKMDAAVRINIVRQYAFEALNWLLRSATQPICAHDVMWWFCTALEKFARIVPPPHIVEDNKENAVAEPIRTVPPTASTSAICPGGRAARGARAAFHSFLGSVSTLAPSLPHASAASLQAIRCWALHYSSHDRAFLHRSQVFSVISKILSRSEEGVHDDGPHCAIHDSFHSYLKENHVWSSSDVTGWCDITVSSRQGMAGALTDGSTETFWESGDEDRNKAKWIQISYPGGSHDDRPHIVCVHIDNTRDTVNKTLLMTFLYSSGSTELIHMQDIEVDPKVATWLCYTLPRVSTTSLRVRCELRGPEAAVRIRQVRVLSAPTLLHSAAVTAPQVLHGLCETDTLRVFRLLTSQVFGKLLEWEQSSDASAEAAVAIDDGVANDDSDLREHVVGILFAGHKLTSLQRQVMSHIVSAIGCETARVRDDWETTLLCVEPTDSEWEESPAAKHVGSQQDNYCFEMLSLLLALSGSAVGRVHLAQRTELLSDLLSLLHTGSERVQRQVISLLRRLVIELPPQKMLAAVNYGSDPISRVTLLDHLVCYLGKAITVQMKVKGSSGSAPATVMMGGSMVSLSASNWFMRGETTKKHAHLVAKLLSDMAEDKLAGSWGLETRTQLANYVCAISQVSEKERQPALCIASPTIWMALASLCVCEQSHLDLVNSSGDGRGARGRDSSSETRPLCANHDDGATAAVIDCRNCGPLCAECDRFLHLNRTARTHHRQICKEEESAIRIDIHEGCGRAKLFWLLLLVDRRTLKALAEFRGMEGGVCEAGPSSEGPAVASGPVAPSGTCRFCGARESTGILTIGNICADQQCQDHGREACNVILACGHLCGGVRGEQTCLPCLHGCAGVSAGEAAPLRQDADDMCMICFTDPLQAAPAIQLTCGHVFHLHCCRKVLVNKWNGPRISFSFSQCPICKEDINHWTLEELLTPIRQLRDEVKRKALMRLEYEGLSAPGGTKGRNVSDPASYAMDRYAYYVCHKCGKAYFGGLARCEAESNGWWEPAELVCGACSDVTGARTCPKHGADFLEYKCRYCCSVAVFFCFGTSHFCNACHDDFQRVTHIPRHLLPQCPAGPKGEQLPGTSDECPLHVQHPATGEEFALGCGVCRHAQGF

Uniprot

H9JS29   A0A212EQJ5   A0A194PG88   D6WED4   A0A1Y1KG51   A0A195AUE6   + More
E9IE92   A0A195D8J1   A0A158P185   A0A195DKF3   A0A026VU65   A0A151JUT3   E2BTI1   A0A1W5LU04   A0A3L8E0J1   A0A0J7L799   A0A087ZTJ5   A0A0L7QZ34   E2A5D5   A0A0T6B1U8   A0A0M8ZZX1   E0VWH2   A0A154P904   F4WU14   A0A310SWY6   T1JCF5   T1HM01   A0A2R5LJS7   A0A293MV39   A0A1B6II52   A0A1B6IU54   A0A2L2YC57   A0A2L2YC52   A0A1L8HHE3   A0A287AXI4   W5Q4B1   A0A1L8H976   A0A287AAA1   F1RP77   A0A2U4A649   A0A2U4A663   A0A287BIQ1   A0A287B464   A0A2Y9SNJ7   A0A2U4A604   A0A2U4A656   A0A2U4A614   A0A2U4A607   A0A2Y9STE2   A0A2Y9SKU1   A0A2Y9SK55   A0A2Y9NID4   A0A2Y9NIC4   A0A1S3EKT5   A0A1S3EKS4   A0A341C6X8   A0A2U4A6V0   A0A2U4A613   A0A2U4A6V5   A0A2U4A609   A0A2Y9SRF9   A0A1Z5KUW7   G3WS84   A0A2U4A618   A0A2Y9NMX8   A0A341C6Y7   A0A341C4B0   A0A2Y9NF46   A0A2Y9NF51   A0A2Y9NMY4   A0A2Y9NTD6   A0A2Y9NTE2   A0A341C4D8   A0A341C4B6   A0A341C5B9   G3U9L7   A0A2Y9NCP6   A0A2Y9NIC9   A0A2Y9NCQ1   A0A341C5Q5   A0A341C5R0   E1BH40   J9PB77   A0A2I0MSA8   F6SH29   V4AJP0   G1T291   G3WS85   A0A2Y9HUF8   A0A1V4J4C6   A0A287D8T7   D4A2D3   F7FJ16   K7EUD0   A0A2Y9JFD8   A0A2U3WNM5   A0A1V4J490   A0A1V4J435   A0A1V4J4E8   K9IPM6  

Pubmed

19121390    22118469    26354079    18362917    19820115    28004739    + More
21282665    21347285    24508170    20798317    30249741    20566863    21719571    26561354    27762356    20809919    28528879    21709235    19393038    16341006    23371554    19892987    23254933    21993624    15057822    22673903    17495919   

EMBL

BABH01017139    BABH01017140    BABH01017141    BABH01017142    BABH01017143    AGBW02013269    + More
OWR43758.1    KQ459605    KPI92043.1    KQ971318    EFA00365.2    GEZM01089083    JAV57727.1    KQ976738    KYM75801.1    GL762567    EFZ21106.1    KQ976749    KYN08749.1    ADTU01005969    ADTU01005970    KQ980765    KYN13336.1    KK107921    EZA47185.1    KQ981732    KYN36598.1    GL450410    EFN81009.1    KX034171    ANO54001.1    QOIP01000001    RLU26230.1    LBMM01000422    KMQ98404.1    KQ414683    KOC63870.1    GL436921    EFN71357.1    LJIG01016186    KRT81356.1    KQ435797    KOX73506.1    DS235820    EEB17728.1    KQ434846    KZC08416.1    GL888345    EGI62371.1    KQ759842    OAD62616.1    JH432064    ACPB03010408    GGLE01005676    MBY09802.1    GFWV01019103    MAA43831.1    GECU01021116    JAS86590.1    GECU01017258    JAS90448.1    IAAA01014318    LAA05718.1    IAAA01014319    LAA05723.1    CM004468    OCT95497.1    AEMK02000077    AMGL01015229    AMGL01015230    AMGL01015231    CM004469    OCT92648.1    GFJQ02008202    JAV98767.1    AEFK01130985    AEFK01130986    AEFK01130987    AEFK01130988    AAEX03013255    AAEX03013256    AAEX03013257    AKCR02000003    PKK32562.1    KB201890    ESO93791.1    AAGW02020608    AAGW02020609    AAGW02020610    AAGW02020611    LSYS01009367    OPJ66989.1    AGTP01036522    AGTP01036523    AGTP01036524    AGTP01036525    AABR07019086    AABR07019087    AABR07019088    AABR07019089    AABR07019090    AABR07019091    AABR07019092    AABR07019093    AABR07019094    AABR07019095    ABGA01182614    ABGA01182615    ABGA01182616    ABGA01182617    ABGA01182618    ABGA01182619    ABGA01182620    OPJ66988.1    OPJ66986.1    OPJ66990.1    GABZ01003325    JAA50200.1   

Proteomes

UP000005204    UP000007151    UP000053268    UP000007266    UP000078540    UP000078542    + More
UP000005205    UP000078492    UP000053097    UP000078541    UP000008237    UP000279307    UP000036403    UP000005203    UP000053825    UP000000311    UP000053105    UP000009046    UP000076502    UP000007755    UP000015103    UP000186698    UP000008227    UP000002356    UP000245320    UP000248484    UP000248483    UP000081671    UP000252040    UP000007648    UP000007646    UP000009136    UP000002254    UP000053872    UP000002281    UP000030746    UP000001811    UP000248481    UP000190648    UP000005215    UP000002494    UP000002280    UP000001595    UP000248482    UP000245340   

PRIDE

H9JS29    F1RP77    D4A2D3   

Pfam

PF13639   zf-RING_2        + More
PF08239   SH3_3
PF03256   ANAPC10
PF00415   RCC1
PF08005   PHR
PF00630   Filamin

Interpro

IPR004939   APC_su10/DOC_dom        + More
IPR001841   Znf_RING       
IPR013083   Znf_RING/FYVE/PHD       
IPR008979   Galactose-bd-like_sf       
IPR003646   SH3-like_bac-type       
IPR014756   Ig_E-set       
IPR017868   Filamin/ABP280_repeat-like       
IPR012983   PHR       
IPR009091   RCC1/BLIP-II       
IPR038648   PHR_sf       
IPR000408   Reg_chr_condens       
IPR013087   Znf_C2H2_type       
IPR000315   Znf_B-box       
IPR016024   ARM-type_fold       

SUPFAM

SSF49785   SSF49785        + More
SSF81296   SSF81296       
SSF50985   SSF50985       
SSF48371   SSF48371       

Gene 3D

3.30.40.10     2.60.120.260     2.130.10.30     2.60.120.820    

ProteinModelPortal

H9JS29   A0A212EQJ5   A0A194PG88   D6WED4   A0A1Y1KG51   A0A195AUE6   + More
E9IE92   A0A195D8J1   A0A158P185   A0A195DKF3   A0A026VU65   A0A151JUT3   E2BTI1   A0A1W5LU04   A0A3L8E0J1   A0A0J7L799   A0A087ZTJ5   A0A0L7QZ34   E2A5D5   A0A0T6B1U8   A0A0M8ZZX1   E0VWH2   A0A154P904   F4WU14   A0A310SWY6   T1JCF5   T1HM01   A0A2R5LJS7   A0A293MV39   A0A1B6II52   A0A1B6IU54   A0A2L2YC57   A0A2L2YC52   A0A1L8HHE3   A0A287AXI4   W5Q4B1   A0A1L8H976   A0A287AAA1   F1RP77   A0A2U4A649   A0A2U4A663   A0A287BIQ1   A0A287B464   A0A2Y9SNJ7   A0A2U4A604   A0A2U4A656   A0A2U4A614   A0A2U4A607   A0A2Y9STE2   A0A2Y9SKU1   A0A2Y9SK55   A0A2Y9NID4   A0A2Y9NIC4   A0A1S3EKT5   A0A1S3EKS4   A0A341C6X8   A0A2U4A6V0   A0A2U4A613   A0A2U4A6V5   A0A2U4A609   A0A2Y9SRF9   A0A1Z5KUW7   G3WS84   A0A2U4A618   A0A2Y9NMX8   A0A341C6Y7   A0A341C4B0   A0A2Y9NF46   A0A2Y9NF51   A0A2Y9NMY4   A0A2Y9NTD6   A0A2Y9NTE2   A0A341C4D8   A0A341C4B6   A0A341C5B9   G3U9L7   A0A2Y9NCP6   A0A2Y9NIC9   A0A2Y9NCQ1   A0A341C5Q5   A0A341C5R0   E1BH40   J9PB77   A0A2I0MSA8   F6SH29   V4AJP0   G1T291   G3WS85   A0A2Y9HUF8   A0A1V4J4C6   A0A287D8T7   D4A2D3   F7FJ16   K7EUD0   A0A2Y9JFD8   A0A2U3WNM5   A0A1V4J490   A0A1V4J435   A0A1V4J4E8   K9IPM6  

PDB

5O6C     E-value=6.03558e-108,     Score=1004

KEGG

101743860    K10693 E3 ubiquitin-protein ligase MYCBP2 [EC:2.3.2.27] | (RefSeq) E3 ubiquitin-protein ligase highw

GO

GO:0016874   GO:0005634   GO:0003676   GO:0008270   GO:0042177   GO:0021952   GO:0021785   GO:0008536   GO:0042803   GO:0061630   GO:0015630   GO:0030424   GO:0051493   GO:0005085   GO:0032880   GO:0050905   GO:0032922   GO:1902667   GO:0031398   GO:0005515   GO:0005089   GO:0035023   GO:0019752   GO:0030246   GO:0007169   GO:0016021  

Length:

1325

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.03001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00040

outside

1  -  1325

 

 

Pi

24.936591

Theta

22.208931

Tajima's D

0.177256

CLR

0.012824

CSRT

0.418379081045948

Interpretation

Uncertain