Gene
KWMTBOMO00553
Pre Gene Modal
BGIBMGA012339
Annotation
PREDICTED:_E3_ubiquitin-protein_ligase_highwire_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.332
Sequence
CDS
ATGCAATTTGTTCTCAGGTGCATATCTACGGAACGTCAATTTTTGTCTGACTTCGTTGGGGGCGATGAAAACACAGCCGGTGGCCGCCTCGCTCGCTGGTTGGCGCCAACATCTCGCGTCGAGCCCAACAATTGCGAGTTGAAGGCACCGGCTGTACCAGCTAGGCCTGCTACAAGGGTAATACTACCGGTTCTCGTGAGAGATCAGTACGGAGACTACGTTGCTTCGCCGGCACTTAAAGTTGAGGTGGTTGTGCAGCGACTCGAAGGAAGCGGGGCCCGGGCCAGTAGGGCTTCAGGTCCCGGTAATGACGAGGGCTTGCCTGATATACCATATCAGCCTACCGTAAGAGACAATATGTGCTTCCAAGCCATCAGTATGATGAAGGCGTACCAGAACTTTTCGTTCGAAGAAATTCGTTTCACTGCCGGGGCCTGGGGTCGGTCGATGTCGAACGCTGTAGCGTTTGGAGGCACAGGACGCTCGCCGGCGGAGCGTCTCACCGTGCGCCAGCAGCTCGACGGTACATTCTACGCTTCCTGGACCCCGAGGTCCCCGGGCACTTACGTATTCAAATGCACCCTGGACGATCTACCCGTACCAAACGAATTAACAATCGACGTTGTCGAATCAACGTACGTAGGTCCCGCCGAACGCGGAGCTCAACCGCTAGTTGCGGGACAATCATCACCTTCCTCGAGGGTGCGAAGTTTCACTGCAGAAAACAGCGCCGGTCTTCGAGTCCGGGCCAGCCCTAGCTTGCAGTCAGAAGAGTTAGGTCGCATCCCTCCCGGAGAAAACATAATGTTCGTGGAGGAGGTTGTGAACAAAGATGGAACGTGGGTACGTTTGAGTTTGGATTGCGCGAATCTATATGCCGAGGAAAGTTCGGGCGTGGCCTGGTGTCTCCAGCACAACAGACATCTCGACCGAATTTTGCTGGAGCCAGTTGAGCCTAGTAGTCCCATACCGGAAGAAGAGGAAGGTGGCTGGAGGGGCGCAGGTGAGATGAGAGACGAAACGCTCTCGTGGAGTCAGGATGAAGACTGCGAGGGGGCTGCAGCAGATGGCCCCAGCGGGATCGATCACAGACTCCCTCTAACTGAACTAAACGACGATAGTGACAGCGGGTCAAGTGCCATCGCACAGGCCATGGAGCTTTGTAAAAGAAATCAAAGTCGCGAAGATCTCTGTTCCTCACCGTCATCGGCTATTCAGCGTCGCAGCAATGGAAATAATGACGACTGGTGCCCCCCCAGTAAGAGATCGAGCGACAACTTCAGAGATGTTGATACCATACTCGAGACGGACATCGAACCGGATGGCGATGACTCTGAGCAAGACAAGCGCTGCGGCAGTCGCATGGCACAAGCCGGCACACAGACTTCACCGGAGAGCGTTGACGATATGCTGGTTCCAGTGCATTTGTTCGCGACCGGACCGAAGGATGGTCGTGTCAGTCCAATGCCGGTGCCTCGCGAGCGAACACCGGCGCGGTCTCGTCCGTATCGACGCGCCAGCCCCCCGCCCCCGCCGCCGTCTCGCTCCGTGCCCGCCCCCCCACCGCCGAAGAAGCACGCACTCAGCCCGGCGCAGGCCGAAACTCTTCGATGTATTTTCGCAGCACTTTTATGGCACGAAGGTATCGTACATGACGCAATAGCATGCGCGGCATTTTTAAAGTTCCACCCGCAGCTGCCGAAGCAAGGGACACGTGTGGTGACGCGATCGTCTCACGATTTCAGCCTGGCTCGTAACCAGAGGCACTCCGTTGAAGTCTCCAACGCGGGGCAGTACCTCAACATAAATCCCTCGACTTTGGAGACATTAACTCGCTCCGGAATCGAAGCTAGCGAGAGTCGAGCCCGAAAAGCTGATGTGGACGTCCAAATGAATGAAGATTATATGCAACCGCAATGCAGCACTTCAACGGATCCAGTTCCCCCTCCGGCTGTAGTGAATGTGTTGCCTCCCGCATTGCGCGCTCTGGTGGCTCTGTGGGACGCTCTCTACGATGCAGATCAACTATCTGCCACCACCGAGAAGATCAAACGGGATCTGGCGCGACGCCAGACGACCAAGACCCCGTACGTAGTACAGTGCGAGCTGTGCGGGGGCTCGAACGTGCCGCCGCCGCTGGCCGCGCACATGCGCCACGCCCACCCGGGCTGCCGAGCCGTCACGCTGCATGGATACGACCGCGCTGGCACCTACAGGGAGGCCGAGCCGCAGGCCGCCACCGCCGACACCCCGGTCACGGCGTGTGGACAACTCGCCCAAGGTCAGACGTCACCCTTTTTATCTTTTTTTATTGCTTAG
Protein
MQFVLRCISTERQFLSDFVGGDENTAGGRLARWLAPTSRVEPNNCELKAPAVPARPATRVILPVLVRDQYGDYVASPALKVEVVVQRLEGSGARASRASGPGNDEGLPDIPYQPTVRDNMCFQAISMMKAYQNFSFEEIRFTAGAWGRSMSNAVAFGGTGRSPAERLTVRQQLDGTFYASWTPRSPGTYVFKCTLDDLPVPNELTIDVVESTYVGPAERGAQPLVAGQSSPSSRVRSFTAENSAGLRVRASPSLQSEELGRIPPGENIMFVEEVVNKDGTWVRLSLDCANLYAEESSGVAWCLQHNRHLDRILLEPVEPSSPIPEEEEGGWRGAGEMRDETLSWSQDEDCEGAAADGPSGIDHRLPLTELNDDSDSGSSAIAQAMELCKRNQSREDLCSSPSSAIQRRSNGNNDDWCPPSKRSSDNFRDVDTILETDIEPDGDDSEQDKRCGSRMAQAGTQTSPESVDDMLVPVHLFATGPKDGRVSPMPVPRERTPARSRPYRRASPPPPPPSRSVPAPPPPKKHALSPAQAETLRCIFAALLWHEGIVHDAIACAAFLKFHPQLPKQGTRVVTRSSHDFSLARNQRHSVEVSNAGQYLNINPSTLETLTRSGIEASESRARKADVDVQMNEDYMQPQCSTSTDPVPPPAVVNVLPPALRALVALWDALYDADQLSATTEKIKRDLARRQTTKTPYVVQCELCGGSNVPPPLAAHMRHAHPGCRAVTLHGYDRAGTYREAEPQAATADTPVTACGQLAQGQTSPFLSFFIA
Summary
Uniprot
Proteomes
Interpro
SUPFAM
SSF49785
SSF49785
Gene 3D
ProteinModelPortal
Ontologies
GO
Topology
Length:
772
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00273
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00010
outside
1 - 772
Population Genetic Test Statistics
Pi
17.541063
Theta
19.980145
Tajima's D
-1.059623
CLR
0.094303
CSRT
0.125993700314984
Interpretation
Uncertain
