SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00549
Pre Gene Modal
BGIBMGA012250
Annotation
PREDICTED:_uncharacterized_protein_LOC106710209_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 2.815
 

Sequence

CDS
ATGGACATAGATATTCTTGAAGAATGTGGAAAGGCTGTTGAAGACTCTGAAGTAACTATAGGCAGAGTGGTCATCTATCTATCAGGGACTTTAAGGAAACATGTGAGAGGGCTGGTTTACTTTATTCATTGGCATAATGTTATGAAATGCGACTTAAAGGCCATTGATTATGGATGTACCGACATTGGTGTACCAACATCAAAAATCTATAAACCAAAAACACCAAGTAAAATGGTACCTTTGGCTATACATTGCAAGCTAGCAAACTGTGTACCTTTAAATACCGATATTTGGGAGGCTAAAACAACTGAAGCTATGCTGACTTATATTGGCAAAGAACGAACAAAAATGATTGTCAAGAATAAAATGTATAACCAGCTTTCTGTAGACTTGATTAACTCTTGCCCTGATGACATAGCAACAATGTTGGCTTACACCAATTATTCATCACTGAGCTTTGGAAATGAGATAAGTATCAGCAGGCTCAGGGCTCCAATGCCACAACTTATCGAACCAGAATTCAAGTGCCTGAATTTGCATATTGATGAAGTTCTACATGTCCGTGTCCAATCAGGAAAAACACTTGATAGCTTCTTTGTTGCCAGAACTTATGATTTTAAACAATATTCCTTGGATCACAGTGACTTTACAGCTTACTGTAAAAGTAAAAGAGTGATAGTAGACAAGGAAATAGAGAAAATAGATTGGGGCGATATTGTTACTGCTACACAAATGGAACTAAAGCCAATTACATGTGATATGTATATCAACAAACCAGCAATGGCCATATATTGTTCAACTGGCAAGAGCGTAATCTGGGATAATGGCTTGCATAAATTCTTGTATCCAGGCTTTGAATTTATGATCAAAATTAAGGAGCTTGGGGACGGCTTTAATAAACCAAATGTAGTTGATGTCTTTCCAGTAAACACTTAA
Protein
MDIDILEECGKAVEDSEVTIGRVVIYLSGTLRKHVRGLVYFIHWHNVMKCDLKAIDYGCTDIGVPTSKIYKPKTPSKMVPLAIHCKLANCVPLNTDIWEAKTTEAMLTYIGKERTKMIVKNKMYNQLSVDLINSCPDDIATMLAYTNYSSLSFGNEISISRLRAPMPQLIEPEFKCLNLHIDEVLHVRVQSGKTLDSFFVARTYDFKQYSLDHSDFTAYCKSKRVIVDKEIEKIDWGDIVTATQMELKPITCDMYINKPAMAIYCSTGKSVIWDNGLHKFLYPGFEFMIKIKELGDGFNKPNVVDVFPVNT

Summary

Pfam
PF00567   TUDOR        + More
PF16013   DUF4781
Interpro
IPR035437   SNase_OB-fold_sf        + More
IPR002999   Tudor       
IPR039117   RNF17       
IPR031962   DUF4781       
Gene 3D

Ontologies

GO

Topology

Length:
311
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00829999999999999
Exp number, first 60 AAs:
0.00421
Total prob of N-in:
0.00988
outside
1  -  311
 
 

Population Genetic Test Statistics

Pi
4.869996
Theta
6.347846
Tajima's D
-0.655382
CLR
0.265645
CSRT
0.214439278036098
Interpretation
Uncertain
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