SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00548
Pre Gene Modal
BGIBMGA012252
Annotation
PREDICTED:_kalirin_[Bombyx_mori]
Location in the cell
Cytoplasmic   Reliability : 1.71 Nuclear   Reliability : 1.656
 

Sequence

CDS
ATGGAGGCAGGAGCAAGGGCTCTCGACGTCCTCCCGCTTCTGCAGGAGCGGGTGGCGTCTCTCACTGGTGGTCGGGATCGCCGGGGAAGTCCTATCATCTGGTTTCCGGCCAACTCAAGGAGGGATCGTGTCGCTCCAGATGACTATAGACGTTTGATACATTACTTGATCAGTATACCTGGTGAATCTGTGAAAAGTCTCGGATTCACAATATTAATTGACATGAGAGGTTCGGCGTGGGCTGCTATCAAGCCAATCCTAAAGGTTCTTCAAGAACACTTCCCATCATCCGTCCATCAGGCACTGGTAGTTAAACCTGACAATTTTTGGCAGAAACAACGTACAACTATTGGAGCACATAAATACAAATTTGAGACAACAATGATTAGTTTAGAAGCACTTCCTAAAGTTATAGATAGTTCACAATTGACTCCAGATCTAGAGGGTACATTGCAGTATGATCACCCACAGTGGATTGATCTAAGATTGGCATTAGAAGAATTGATGTGGCAGGCCGGTGAGCTTCTAGATCGATTAGATGATTTACAAGAGGATGTAGCCAGAGCAGACTTTGCTGATGATGTGACGGGTGCAAGGAGAGCCATTGATGCACATGCAGACATTAGTAAACGACTTGCCAAAGTTCCTGTTGATGAATTAGAAGCACAAGGTGAGAGGGTGTTACAACGATTAGAAGTGGCGGAGGCCGCGTGTTCCGAAGCTAGCGGTAGTGGCGCCGAAGGTTCTGCTTTCCACTGCGGATCGCCGGGCGCCGTGCGAGCTCAACTTTCGGCTGTGCGGTCCGCGCATGCGCATGCCCATAAACTTTGGCAACACAAAAAAATGCAGCTAGATCAGTGTTTTCAGCTCAGATTATTTGAACAAGACTGCGAGAAGATGTTGGAATGGATCGTGAACCACCGTACGGCCTTCTTAGCCACGTACGTTGAGATCGGACGGTCATGTGCGGCCGCAAAACGTTTACAGGAAGAACACGCTAGATTTGCAGCGGCGTGTACTAGCGGCGGAAGGCCGAGTGTCGCACGTGTGACGACAGCCGCGCGACGTCTCGCTGACAAGAGACATTACGCTGAAAGTCAGATATCAGCATTAGCACAAAGACTCGAAAGAGCTTACAAACAGTTGGCAGCCGGTCTTGAAGAACGTTCTGCAGTGCTGTCACTGTCGGTGGTATTTCATCATAAAGCTGAGGCGTACGCTTCAGCGGTGGGAGGGTGGGGAGCGCAGTGTGCCGTCGCTCTACAACTAGCAACGGGTCAAGGAGGAGCGCCTTGTAACGATCCGAGGGCATTAGAACAACACGCCCAGAGACATCGCCAACTTTACGAACACATGTGTCAGGCCTACACTGAGGTTCATTCAACAAGTAAAAAACTTTTATATCAGTTGGATCATTTAGTTCAAGTATGTCATCAAACGGATCCCACGGATATGCAGAGTGAAGGCACAGTGAGTAGTGCGGGTAGCAGTGGTGGCGATCCTGCAGCCGATTACAGTTCGGGAGCAAACCACGTGCTGGCCGTAATACATCAAATTCTTGGCCATCACAGGGCTTTGGAAGCTAGATATCACCAAGCGAGACTTAAATTGCATCAAAGATTAGCTTTGTTGCTCTATAAAGAAGACTGTAGACAGGTATTAGACTGGTTGGCAAACCATGGTGAAGTATTTTTGCAGAAAAATACTGGTATAGGAAGAAATCTCCATAAAGCTAGGGTTTATCAGAAATCTCATGAACATTTTGAAAATGTTGCACAAAATACTTACACAAACGCGGAGAAGCTGCTGGGAGCTGCTGAGGAGTTAGCCCGTTCGGGTGAATGTGATCCAGAGGAAGTCCTTGGAGTAGCGCGGGAACTCGAAGCTCATGTAGCTGCCTTCGCGGCCAGGGTCGATAGAAGAAGAAGACGACTCGACCTGGCCGTACTTCTGTATACACATGAGAAAGAGCTGCTGCAATGGTTGGATACACTGAGAAGCGGAGGCGGTGTATGCGCTACAGACGACACTCCCGAAGCGGCACGAAGAGCTTTAGAACAATGCGCCCAGCATCGAGCAGCTAGCATGGACGCATGCGCTGCAACTATCGCGCAGGGCGAAGCATTAATGCAAGACTTAAGATCTTCTGGCGATTCGGATGCAACCAGCACCGCTGCCGTGGAATCCACTTTAGAGCGATTGCGAGGAACACGCAGTGCACTCGAGGAGCTGTGGTCCGATCGCGAAAGGAAACTGGAGCTCACATTACAGCTTAGACATTTTGAAAGGGACGCTCTGGAGGTTTCGAGCCGACTAGAGTTGTGGGGTGACGAATTGCAACGCACCGAACCGCCTCGTGATCCCCAGCAAGCGGAGCAGGCCCTTGCAGCACACAACGAAAGTGTTGCTAGAATGCAACACGCTACTTTTCAGGTGGTACAGCAGGGTCAAGAATTGGCAGCAGCTATTGCAGACGCTTCAGATGTAATGGCATCTAGTGGTTCTGACGGGACTGAAACTGCGCCTCTTGATGCACAAGGTCGTGTGCAGCTGCTGCTTGAGTTCCTTCACGACAGGCAGCTTGATTTGGAAGAATTGGCTGAAGAAAGACGTGCCAGATTCGAACAGTGCGTGCAACTTGGACAATTTCAAAAAGACGCAGCTCAGGTGGTCAGTTGGATACGTAACGGAGAGGCTATGTTGGCTGCGTCGTTCTCCATTCCTGGAACTCTCTCTGAGGCCGAGCAGCTTAAAAGGGAGCACGACCAATTTCAAGTGGCAGTGGAGAAAACACACGCCAGTGCTGTTCAAGTAAAGTACAGGGCTGATGCGTTGAGGGCTGCCAATCACTACGATCCCCATACCATCAGAGAAATATCAGAGGAGGTAACTGAGCGCTGGCAGCGATTAGTGACCTGCGCCGAGGAGCGTCACAAGCTCGTGACGGCCTCACTCAATTTCTACAAGACAGCCGAACAGGTGTGTTCGGTGCTCGACTCATTGGAACGTGAATACCGCAGAGATGAAGACTGGTGTGGATCTGCAGCCGCTCCATCAACTGACGAGCCGACTTTAGCTCAGTCTATTGACAAAGCCGCACAGGTGGCTGCGCTTATAGTAAAACATGGCGAACAAAAAGAAGCATTTCTGAAGGCCTGCACTCTCGCTCGCCGAACAGCCGAAACATTCTTAAAGTACGCTGGACGTTCGGCTCAAGTTCACGGCCAGACTCCAGCCGCAAGCAAGGCTCATCATGAGCAGACACGAGCTATACTTGACACCTTATTGGCCCAAGAAACAAAGGTATTGGAACATTGGACGGTACGCAAGAAGCGTCTAGAACAATGTCAGCAGTTTGCTTTATTCGAGCGTTCGGCCCGCGCCGCAGTCGAGTGGATCCGTGAGACTCAGGAACGCTGCGGAGCTGCCGCGGCCGCTGCTGCTGCGGGCGTCGCTAGGGAGAGTCGCGAGCGAGTGCGTTTGCTCGCTCAGTTGGCAGACGGACTAGTCGAGAAGGGACACCCTCATGCCGTTCAGATTAAAGAATGGGTTGCTGCTGTTGACGCCAGATACGCGGAATTCAGTGGTTCTATGGAAGGTGGAGAGAGCGAACCAGAAAGTGACTCAGGCGTGGCTCCATCCTTAGCATCATCGCAATCTGCTGATAACGACAACCGTGCTGAACCACAGCCACCAACTATAGGCGATGATAAACGGCGTAGCGCCAGACGTAAAGAGTTTATAATGGCAGAGCTGCTACAAACTGAACGTGCCTACGTGAAAGATCTGGAGACCTGCATTACTTGTTATTTGCGTGAAATGCGTACCGATCCCGCCTCCGTACCGCTGCCACTTCAAGGAAAGGAGGACTTGATATTTGGTAACATAGAAGAGATTCATCGTTTCCACGAGCGCGTTTTCCTCAGAGAATTGGACAAATACGAGACGATGCCGGAAGACGTCGGCCACTGCTTCGTGACTTGGGCGCGCGAGTTCGATATGTACGTGTCGTACTGTCGCAACAAGCCAGACAGCAATGCGGCTGTCGTCCAACACGCCGGCGATTACTTTGAGAGGGTGCAACGAAAGAAAAAACTCGAGCATCCACTCGCCGCTTATTTGATCAAACCGGTTCAAAGGATTACCAAGTATCAACTGCTGCTGAAGGATCTTCAGGCATGCTGTGCTGAAGGACAAGGAGAGATAAAGGACGGCTTGGAAGTTATGCTCTCAGTGCCAAAGAAGGCCAATGATGCGATGCACCTCTCTCTGCTCGAGGGGTGTGACGTCCCGACTGACAGCCTCGGCGAGGTCGTCCTCCAGGACTCCTTCCACGTGTGGGACCTTCGTCAGATCATCAAAAAGGGACGCGAGAGGAGAGTCTTCCTTTTCGACTTGCATCTGCTTTTGGCGAAAGAAGTGAAGGATTCGCACGGAAAAGCCAAATACATTTACAAGACTAAATTTATGACATCAGAACTTGGGGTGACAGAACACATCGAAGGAGACGAATGCAAATTCTCGGTGTGGACTGGCCGCGAGCCAATGGCCAGCGACTGTCGCATCGTACTTAAGGCACCCTCGCTTGAAGTGAAGCAAACTTGGGTACGGAGTCTCAGGGAGGTTATACAGGAAACTTATTTCAGCTGTGCCCTGCCTCCCAGGAGCCCTGCACGGGTTCGCCCTACAAGCTCTCAACGATCTAGCAGGGATTTCGAAGACACCGTACTAGACGAAACGACGGAAAATCTCGACAGAAACTCGCTCGCGTCTTTCGGCAGTGGTAATACCACGGATTCCGATAAGGCCGGACCAGAAATGACATGGGTGATTTATGAGCACACCTCGGGTGGAACTGGTGAACTAACTGTGACAAAAGGCCAGCAAGTGGAGGTGGTAGAACCGTGGACCACTCGGCCTGACTGGTGGGTGGTCCGGGTTCCAGGGGAGCCACCACTAGAAGGTGCAGTACCAGCTCAGGTGCTCAAGCCGCAGCCACAACATCCGCCACATAAGACATCACCCTCCAGACGTCCTCTAAGCCAACCCTGTGAGGAAACGCTAGGGTTGTAA
Protein
MEAGARALDVLPLLQERVASLTGGRDRRGSPIIWFPANSRRDRVAPDDYRRLIHYLISIPGESVKSLGFTILIDMRGSAWAAIKPILKVLQEHFPSSVHQALVVKPDNFWQKQRTTIGAHKYKFETTMISLEALPKVIDSSQLTPDLEGTLQYDHPQWIDLRLALEELMWQAGELLDRLDDLQEDVARADFADDVTGARRAIDAHADISKRLAKVPVDELEAQGERVLQRLEVAEAACSEASGSGAEGSAFHCGSPGAVRAQLSAVRSAHAHAHKLWQHKKMQLDQCFQLRLFEQDCEKMLEWIVNHRTAFLATYVEIGRSCAAAKRLQEEHARFAAACTSGGRPSVARVTTAARRLADKRHYAESQISALAQRLERAYKQLAAGLEERSAVLSLSVVFHHKAEAYASAVGGWGAQCAVALQLATGQGGAPCNDPRALEQHAQRHRQLYEHMCQAYTEVHSTSKKLLYQLDHLVQVCHQTDPTDMQSEGTVSSAGSSGGDPAADYSSGANHVLAVIHQILGHHRALEARYHQARLKLHQRLALLLYKEDCRQVLDWLANHGEVFLQKNTGIGRNLHKARVYQKSHEHFENVAQNTYTNAEKLLGAAEELARSGECDPEEVLGVARELEAHVAAFAARVDRRRRRLDLAVLLYTHEKELLQWLDTLRSGGGVCATDDTPEAARRALEQCAQHRAASMDACAATIAQGEALMQDLRSSGDSDATSTAAVESTLERLRGTRSALEELWSDRERKLELTLQLRHFERDALEVSSRLELWGDELQRTEPPRDPQQAEQALAAHNESVARMQHATFQVVQQGQELAAAIADASDVMASSGSDGTETAPLDAQGRVQLLLEFLHDRQLDLEELAEERRARFEQCVQLGQFQKDAAQVVSWIRNGEAMLAASFSIPGTLSEAEQLKREHDQFQVAVEKTHASAVQVKYRADALRAANHYDPHTIREISEEVTERWQRLVTCAEERHKLVTASLNFYKTAEQVCSVLDSLEREYRRDEDWCGSAAAPSTDEPTLAQSIDKAAQVAALIVKHGEQKEAFLKACTLARRTAETFLKYAGRSAQVHGQTPAASKAHHEQTRAILDTLLAQETKVLEHWTVRKKRLEQCQQFALFERSARAAVEWIRETQERCGAAAAAAAAGVARESRERVRLLAQLADGLVEKGHPHAVQIKEWVAAVDARYAEFSGSMEGGESEPESDSGVAPSLASSQSADNDNRAEPQPPTIGDDKRRSARRKEFIMAELLQTERAYVKDLETCITCYLREMRTDPASVPLPLQGKEDLIFGNIEEIHRFHERVFLRELDKYETMPEDVGHCFVTWAREFDMYVSYCRNKPDSNAAVVQHAGDYFERVQRKKKLEHPLAAYLIKPVQRITKYQLLLKDLQACCAEGQGEIKDGLEVMLSVPKKANDAMHLSLLEGCDVPTDSLGEVVLQDSFHVWDLRQIIKKGRERRVFLFDLHLLLAKEVKDSHGKAKYIYKTKFMTSELGVTEHIEGDECKFSVWTGREPMASDCRIVLKAPSLEVKQTWVRSLREVIQETYFSCALPPRSPARVRPTSSQRSSRDFEDTVLDETTENLDRNSLASFGSGNTTDSDKAGPEMTWVIYEHTSGGTGELTVTKGQQVEVVEPWTTRPDWWVVRVPGEPPLEGAVPAQVLKPQPQHPPHKTSPSRRPLSQPCEETLGL

Summary

EMBL
KQ971319    KYB28883.1    GEZM01051301    JAV75037.1    GEZM01051308    JAV75029.1    + More
GEZM01051303    JAV75035.1    GEBQ01005618    JAT34359.1    GEBQ01023575    JAT16402.1    GFTR01008957    JAW07469.1    EFA00235.2    GBBI01002410    JAC16302.1    GEDC01015299    GEDC01006504    JAS21999.1    JAS30794.1    GEDC01030351    GEDC01012604    JAS06947.1    JAS24694.1    KYB28885.1    APGK01049651    APGK01049652    KB741156    ENN73578.1    KB631725    ERL85599.1    KQ434783    KZC04669.1    GBXI01009689    GBXI01007173    GBXI01002307    JAD04603.1    JAD07119.1    JAD11985.1    GDHF01031332    GDHF01022266    JAI20982.1    JAI30048.1    KQ414758    KOC61451.1    GAMC01018254    GAMC01018252    JAB88301.1    QOIP01000006    RLU21448.1    KZ288227    PBC31735.1    GAKP01016777    JAC42175.1    JRES01000611    KNC29898.1    JXJN01010338    JXJN01010339    JXJN01010340    CH933809    EDW17517.2    KRG05584.1    ABLF02035913    ABLF02035914    ABLF02035926    ABLF02035927    ABLF02035933    ABLF02035935    ABLF02035937    ABLF02035938    ABLF02035939    ABLF02060898    GDHC01017005    GDHC01007329    JAQ01624.1    JAQ11300.1    ADTU01017677    ADTU01017678    ADTU01017679    ADTU01017680    ADTU01017681    KQ983097    KYQ47508.1    KQ977901    KYM98901.1    GAMC01018253    GAMC01018250    JAB88305.1    DS235101    EEB12015.1    JH431646    GEFM01004538    JAP71258.1    AJWK01010177    AJWK01010178    AJWK01010179    AJWK01031337    GACK01008705    JAA56329.1    GEDV01011483    JAP77074.1    GEDV01003487    JAP85070.1    GEDV01001565    JAP86992.1    GGLE01001242    MBY05368.1    GACK01000475    JAA64559.1    GACK01000474    JAA64560.1    GFAC01005742    JAT93446.1    GEBQ01012080    JAT27897.1    GEBQ01022190    JAT17787.1    PZQS01000001    PVD38852.1    KK852768    KDR16954.1    CP026249    AWP04894.1    KK501769    KFP17644.1    AERX01010801    AERX01010802    KL206896    KFV86790.1    HADY01004663    SBP43148.1    AHAT01012339    ABQF01011024    ABQF01011025    ABQF01011026    ABQF01011027    AADN05000350    HADY01021860    SBP60345.1    GCES01061174    JAR25149.1    GCES01061175    JAR25148.1    KL218243    KFP03374.1    HADZ01004722    SBP68663.1    GCES01150143    JAQ36179.1    AKHW03006853    KYO18170.1    HAEJ01014851    SBS55308.1    LSYS01005643    OPJ76494.1   
Pfam
PF00435   Spectrin        + More
PF00621   RhoGEF
PF13716   CRAL_TRIO_2
PF07679   I-set
PF00069   Pkinase
PF00041   fn3
PF00018   SH3_1
PF00650   CRAL_TRIO
PF00169   PH
Interpro
IPR001251   CRAL-TRIO_dom        + More
IPR001331   GDS_CDC24_CS       
IPR011993   PH-like_dom_sf       
IPR002017   Spectrin_repeat       
IPR036028   SH3-like_dom_sf       
IPR001849   PH_domain       
IPR000219   DH-domain       
IPR018159   Spectrin/alpha-actinin       
IPR001452   SH3_domain       
IPR035899   DBL_dom_sf       
IPR028570   TRIO       
IPR036865   CRAL-TRIO_dom_sf       
IPR028569   Kalirin       
IPR013783   Ig-like_fold       
IPR007110   Ig-like_dom       
IPR003599   Ig_sub       
IPR003961   FN3_dom       
IPR008271   Ser/Thr_kinase_AS       
IPR036116   FN3_sf       
IPR013098   Ig_I-set       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR036179   Ig-like_dom_sf       
IPR003006   Ig/MHC_CS       
IPR017441   Protein_kinase_ATP_BS       
IPR003598   Ig_sub2       
SUPFAM
SSF48065   SSF48065        + More
SSF50044   SSF50044       
SSF52087   SSF52087       
SSF56112   SSF56112       
SSF49265   SSF49265       
SSF48726   SSF48726       
PDB
2NZ8     E-value=7.52321e-117,     Score=1082

Ontologies

Topology

Length:
1690
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.18764
Exp number, first 60 AAs:
0.07677
Total prob of N-in:
0.00840
outside
1  -  1690
 
 

Population Genetic Test Statistics

Pi
1.251147
Theta
15.178711
Tajima's D
-1.932636
CLR
0.141337
CSRT
0.016249187540623
Interpretation
Possibly Positive selection
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