Gene

KWMTBOMO00541

Pre Gene Modal

BGIBMGA012989

Annotation

Yokozuna_[Bombyx_mori]

Location

Bomo_Chr1(+):15955076-15957636      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.676

CDS

ATGTTAGCCAGTCTGGATAAAGTTTTTGAGAGAAAAGGTATTTTCACTAAATTACACTTGCGAAGAAAGTTATTGTCTCTTAAGCTGAGGGATGATAAATTGGAAGACTATTTCATGAGATTTGAAAGTCTGATTAGAGAAATAGAAAATATTGATAAAAAGATGGATGAAGAAGTTAAAATATGTTATTTGCTGACGGGTATGTCGGAAAAGTACAACACAGTGATAACTGCTATTGAAACAATGTCTGCAGATAAAATTGACATGGAGTTTGTCAAGGCTCGGTTATTGGACGAAGAACTCAAACTGAATAATAAAGGTGAAGAGTATAATGATACAAAGAATGATGTAAGTTTTACTGCCTCAAGTGTAGAATGTTATCGTTGCCACAAAAAGGGCCATTTTGCACGTGAATGTAGAAGCAGAGGTCGTGGCTATTCAAGGAGAAACATTAATAATAAAGGTATATGTGGTAAAAACAGAACTGGAGAACAAAATAATATGACAGAAAGCATCCCAGAGAATAAATATAATTTTCTAGCAATAACGGAGTGTAATCTAAGTAGAGAAGACAAATTTATAGAATTTATAATAGATTCAGGAGCTACAGAAAATCTTATCAAGGAAGAATTAGAGAAATACATGTATGAAATTAAAAAACTACCAGATAAAATAAAAATTAAGATTGCAAATGGAGAAATATTAGAGGCTGACAAGAAAGGAAAGATAACCATAAGAGATAAAAATAATAATACTATAAATATAGAAGCGTTAATGGTCCCAGGGATTTATCATAATATAATATCTGTAAGAAACTTAAATATGAAAGGAAATAAAGTTGTTTTTACAAAATTTGGAGCACAAATAATAAATGGAAGAAAAGTCTTAAAATGTTCAGATAGAAATGGTTTATATATAGTACAAGGCGAAATAATACTAATAGAAGAAGCGAACTCAAGTGTACAGCAAGACAAAAATATTTGGCACCAACGTCTCGGACACTTAAATAGGAAATCATTAAAAATTATGGGTTTACCTGTGTCTGATGAAACATGTGGTCCTTGCATGAAGGGAAAATCTACTCGTTTATCATTCTATCCAGTTGACAGGCCAAGAAGTAGAAAAATAGGAGAATTATTGCATACAGATATTGGAGGTCCTGTATCACCAATTTCTTATGATGAAAAACAATATTACCAGACCATAACTGATGATTTTTCTCATTTTGTGACTGTTTATCTATTAAAGAATAAATCTGAAGCCACAAGAAATTTAATAAATCATATAAAGGAGTTAGAAAGACAAAAGGAAACTAAAGTTAAACGCATAAGATGTGATAATGGTGGAGAGTTCACCGCTGGCTGTTTGAAGCAATTTTGTATGGAAAATGGAATTATAATAGAGTATAGTCAACCTTACACACCACAACAAAATGGTGTGGCAGAGAGGCTAAACAGAACATTACTAGATAAGTCAAGAACTTTATTAAGTGAAACTGGATTACCTAAATATTTGTGGTCTGAGGCTATAATGTGTGCAGCATATCAATTGAATCGATGCCCATCAAGATCTATAAAGTATAAGATACCAGCTGAAATATACTACGGACTAGAAAATGTTAACTTGAACAAGTTAAAGGTATTTGGTTCTAAAGCATGGTATACGTGTGTCCCACAGAATAAGAAATTAGATAATAGAGCTGAAGAAGCCATTATGGTTGGCTATGGCAAACAAGGTTATAGATTATGGAATCCAAAAACAACAGAAATAATATTCTGCAGAGATGTCAAGTTTGATGAAAAGTACTATGAACATAAAAACAGTATTAAAAATAACAACTATATTTATTTACCAGAAGAGGACACACAAAATGAACTTATGTGCAATGATAAAAATAAAATTGAGGAAGAAAAAGTAATACAGAAAAATGAAGAGACAGACACAAAAAGAACTAGATCAGGAAGGATAATAAAGCAACCTGATTATCTAAAGAATTTTGGGACGTACACAGCATATTGTTACTTAGTGTGTAATGACCCAGAAAGCTATGAAGAAGCGATAAAAGAAGTTTCATGGAAAGAAGCGATACATAAGGAATTAGCAGCACTTGAGAACTTACAAAGCTGGGAAGAGACTAAACTACCGAAAGGAAAATTAGCTATAGACACTAAGTGGGTTTTTAGAACGAAAGACGATGGCACTAAGAAAGCCAGATTAGTCGCTCGAGGTTTTCAAATAAAAAAATTATGA

Protein

MLASLDKVFERKGIFTKLHLRRKLLSLKLRDDKLEDYFMRFESLIREIENIDKKMDEEVKICYLLTGMSEKYNTVITAIETMSADKIDMEFVKARLLDEELKLNNKGEEYNDTKNDVSFTASSVECYRCHKKGHFARECRSRGRGYSRRNINNKGICGKNRTGEQNNMTESIPENKYNFLAITECNLSREDKFIEFIIDSGATENLIKEELEKYMYEIKKLPDKIKIKIANGEILEADKKGKITIRDKNNNTINIEALMVPGIYHNIISVRNLNMKGNKVVFTKFGAQIINGRKVLKCSDRNGLYIVQGEIILIEEANSSVQQDKNIWHQRLGHLNRKSLKIMGLPVSDETCGPCMKGKSTRLSFYPVDRPRSRKIGELLHTDIGGPVSPISYDEKQYYQTITDDFSHFVTVYLLKNKSEATRNLINHIKELERQKETKVKRIRCDNGGEFTAGCLKQFCMENGIIIEYSQPYTPQQNGVAERLNRTLLDKSRTLLSETGLPKYLWSEAIMCAAYQLNRCPSRSIKYKIPAEIYYGLENVNLNKLKVFGSKAWYTCVPQNKKLDNRAEEAIMVGYGKQGYRLWNPKTTEIIFCRDVKFDEKYYEHKNSIKNNNYIYLPEEDTQNELMCNDKNKIEEEKVIQKNEETDTKRTRSGRIIKQPDYLKNFGTYTAYCYLVCNDPESYEEAIKEVSWKEAIHKELAALENLQSWEETKLPKGKLAIDTKWVFRTKDDGTKKARLVARGFQIKKL

Similarity

Belongs to the glutamine synthetase family.

Uniprot

O96968   A0A146L6N5   A0A0A9XG27   A0A0A9ZBW6   A0A0A9Z0I6   A0A146KTS1   + More
A0A1B6DFK3   A0A0A9WLY1   A0A0A9WQA3   A0A0A9ZCB8   A0A146LV28   A0A182GHP7   A0A2S2PNK0   A0A1Y1L115   A0A182GA29   A0A0J7N374   A0A1Y1MP14   A0A1Y1M4K4   A0A1Y1MQF0   J9LXN4   A0A182GSW5   A0A1W7R6C3   J9KJ72   A0A0T6AT79   A0A182H4X3   A0A224XA26   A0A151RCJ0   A0A182G1G7   A0A023F102   A0A151TNK0   A0A151RCT9   A0A2N9EUG1   A0A2N9HSV3   A0A2N9GHB5   A0A2N9F1W0   A0A1W7R6K7   A0A1B6FK59   A0A0J7K6U3   A0A068B703   A0A2N9IT47   A0A2N9JB15   A0A2N9EE40   A0A2Z7CM54   A0A182GGE6   A0A2N9IKI1   A0A2N9J3Y8   A0A2N9IPG8   A0A1B6F1U1   A0A2N9GHK9   A0A2N9ESI4   A0A146LT61   A0A2N9GK98   A0A2N9HHD8   A0A2K3MYT4   A0A2A4JRI1   A0A2N9GTI4   A0A151IY32   A0A2N9JBD5   A0A0J7K689   A0A151TGQ2   A0A085MVP5   A0A0V0T3I0   A0A182GYI1   A5CBM1   A0A2G2VUS6   A0A151RBY1   A0A085N572   A0A0V0TUP0   A0A1Y1MJE9   A5AS37   E5SB91   A0A194RJV9   A0A151J9U8   A0A0A9XBM0   A0A151TPU3   A0A151RPT4   A5B5N4   A0A329RLJ1   A0A2K3N1R3   Q967L5   A0A151TGP0   A0A2Z6NJ75   A0A2Z6N0M9   A0A1B6C2D3   A0A2N9FNY4   A0A2N9IUL9   A0A2N9GXL8   B8YLY6   A0A2N9I1L5   A0A2A4J959   A0A2N9I4X9   A0A396INR0  

Pubmed

10333565    26823975    25401762    26483478    28004739    22057054    + More
25474469    25902549    24500806    28382043    24929829    29089032    26354079    11319273    19656907    30397259   

EMBL

AB014676    BAA74713.1    GDHC01015802    JAQ02827.1    GBHO01027564    JAG16040.1    + More
GBHO01002761    JAG40843.1    GBHO01004832    JAG38772.1    GDHC01019310    JAP99318.1    GEDC01012841    GEDC01000503    JAS24457.1    JAS36795.1    GBHO01035173    JAG08431.1    GBHO01034936    JAG08668.1    GBHO01002616    JAG40988.1    GDHC01007058    JAQ11571.1    JXUM01244080    KQ636179    KXJ62430.1    GGMR01018348    MBY30967.1    GEZM01072005    JAV65635.1    JXUM01155348    KQ572178    KXJ68066.1    LBMM01010924    KMQ87150.1    GEZM01028916    JAV86195.1    GEZM01042286    JAV79968.1    JAV86196.1    ABLF02003343    ABLF02041793    JXUM01085595    KQ563513    KXJ73717.1    GEHC01000928    JAV46717.1    LJIG01022881    KRT78250.1    JXUM01025857    KQ560736    KXJ81076.1    GFTR01008662    JAW07764.1    KQ483843    KYP40338.1    JXUM01136904    KQ568499    KXJ68982.1    GBBI01004033    JAC14679.1    CM003606    KYP68607.1    KYP40337.1    OIVN01000332    SPC78433.1    OIVN01003986    SPD14739.1    OIVN01001906    SPC98838.1    OIVN01000486    SPC81000.1    GEHC01000895    JAV46750.1    GECZ01019212    JAS50557.1    LBMM01012492    KMQ86193.1    KF740825    AIC77183.1    OIVN01006217    SPD28032.1    OIVN01006466    SPD33659.1    OIVN01000260    SPC77257.1    KQ995285    KZV47435.1    JXUM01011189    KQ560325    KXJ83029.1    OIVN01002424    OIVN01005946    SPD03496.1    SPD24589.1    OIVN01006353    SPD31284.1    OIVN01006155    SPD26398.1    GECZ01025604    JAS44165.1    OIVN01001931    SPC99063.1    OIVN01000279    SPC77544.1    GDHC01007678    JAQ10951.1    OIVN01002029    SPC99965.1    OIVN01003431    SPD11153.1    ASHM01014005    PNX95963.1    NWSH01000816    PCG74073.1    OIVN01002361    SPD02992.1    KQ980795    KYN13016.1    OIVN01006472    SPD33779.1    LBMM01012772    KMQ86003.1    CM003608    KYP66219.1    KL367628    KFD61291.1    JYDJ01000808    KRX33413.1    JXUM01097527    KQ564351    KXJ72390.1    AM489192    CAN71109.1    MLFT02000010    PHT36714.1    KQ483853    KYP40164.1    KL367553    KFD64618.1    JYDJ01000136    KRX42725.1    GEZM01032204    JAV84770.1    AM433482    CAN69340.1    KQ460297    KPJ16236.1    KQ979396    KYN21742.1    GBHO01026200    JAG17404.1    KYP69041.1    KQ483623    KYP44533.1    AM447500    CAN74198.1    MJFZ01000929    RAW24142.1    ASHM01015075    PNX96991.1    AY009101    AAK12626.1    KYP66220.1    DF974005    GAU43961.1    DF973299    GAU24969.1    GEDC01029908    JAS07390.1    OIVN01001308    SPC92446.1    OIVN01006211    SPD27863.1    OIVN01002513    SPD04258.1    FJ544856    ACL97386.1    OIVN01004651    SPD18552.1    NWSH01002292    PCG68657.1    PCG68658.1    OIVN01004824    SPD19458.1    PSQE01000003    RHN67289.1   

Proteomes

UP000069940    UP000249989    UP000036403    UP000007819    UP000075243    UP000236291    + More
UP000218220    UP000078492    UP000055048    UP000224567    UP000053240    UP000251314    UP000265566   

PRIDE

O96968   

Pfam

PF00665   rve        + More
PF07727   RVT_2
PF13976   gag_pre-integrs
PF13961   DUF4219
PF00098   zf-CCHC
PF17921   Integrase_H2C2
PF04827   Plant_tran
PF00069   Pkinase
PF00120   Gln-synt_C

Interpro

IPR036397   RNaseH_sf        + More
IPR039537   Retrotran_Ty1/copia-like       
IPR001584   Integrase_cat-core       
IPR013103   RVT_2       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR036875   Znf_CCHC_sf       
IPR025724   GAG-pre-integrase_dom       
IPR021109   Peptidase_aspartic_dom_sf       
IPR025314   DUF4219       
IPR041588   Integrase_H2C2       
IPR006912   Harbinger_derived_prot       
IPR000719   Prot_kinase_dom       
IPR008266   Tyr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR014746   Gln_synth/guanido_kin_cat_dom       
IPR008146   Gln_synth_cat_dom       

SUPFAM

SSF53098   SSF53098        + More
SSF57756   SSF57756       
SSF50630   SSF50630       
SSF56112   SSF56112       
SSF55931   SSF55931       

Gene 3D

3.30.420.10     2.40.70.10    

ProteinModelPortal

O96968   A0A146L6N5   A0A0A9XG27   A0A0A9ZBW6   A0A0A9Z0I6   A0A146KTS1   + More
A0A1B6DFK3   A0A0A9WLY1   A0A0A9WQA3   A0A0A9ZCB8   A0A146LV28   A0A182GHP7   A0A2S2PNK0   A0A1Y1L115   A0A182GA29   A0A0J7N374   A0A1Y1MP14   A0A1Y1M4K4   A0A1Y1MQF0   J9LXN4   A0A182GSW5   A0A1W7R6C3   J9KJ72   A0A0T6AT79   A0A182H4X3   A0A224XA26   A0A151RCJ0   A0A182G1G7   A0A023F102   A0A151TNK0   A0A151RCT9   A0A2N9EUG1   A0A2N9HSV3   A0A2N9GHB5   A0A2N9F1W0   A0A1W7R6K7   A0A1B6FK59   A0A0J7K6U3   A0A068B703   A0A2N9IT47   A0A2N9JB15   A0A2N9EE40   A0A2Z7CM54   A0A182GGE6   A0A2N9IKI1   A0A2N9J3Y8   A0A2N9IPG8   A0A1B6F1U1   A0A2N9GHK9   A0A2N9ESI4   A0A146LT61   A0A2N9GK98   A0A2N9HHD8   A0A2K3MYT4   A0A2A4JRI1   A0A2N9GTI4   A0A151IY32   A0A2N9JBD5   A0A0J7K689   A0A151TGQ2   A0A085MVP5   A0A0V0T3I0   A0A182GYI1   A5CBM1   A0A2G2VUS6   A0A151RBY1   A0A085N572   A0A0V0TUP0   A0A1Y1MJE9   A5AS37   E5SB91   A0A194RJV9   A0A151J9U8   A0A0A9XBM0   A0A151TPU3   A0A151RPT4   A5B5N4   A0A329RLJ1   A0A2K3N1R3   Q967L5   A0A151TGP0   A0A2Z6NJ75   A0A2Z6N0M9   A0A1B6C2D3   A0A2N9FNY4   A0A2N9IUL9   A0A2N9GXL8   B8YLY6   A0A2N9I1L5   A0A2A4J959   A0A2N9I4X9   A0A396INR0  

PDB

5UOQ     E-value=1.40092e-07,     Score=136

KEGG

101739747    no KO assigned | (RefSeq) uncharacterized LOC101739747

GO

GO:0000943   GO:0015074   GO:0008270   GO:0003676   GO:0004491   GO:0016021   GO:0016788   GO:0005524   GO:0004672   GO:0004356   GO:0003964   GO:0004190   GO:0006508   GO:0006013   GO:0015923   GO:0030246   GO:0007169  

PANTHER

PTHR11439  

Length:

749

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00724999999999999

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.00037

outside

1  -  749

 

 

Pi

3.321286

Theta

4.764898

Tajima's D

-0.829215

CLR

0

CSRT

0.168891555422229

Interpretation

Uncertain