Silkworm Genome Informatics Database

Gene

KWMTBOMO00539

Pre Gene Modal

BGIBMGA012330

Annotation

PREDICTED:_PERQ_amino_acid-rich_with_GYF_domain-containing_protein_2_[Bombyx_mori]

Location

Bomo_Chr1(+):15852546-15900727 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.067

CDS

ATGGGAGATCGTAGTAATCCAATAAAATTTGGTCCATTATGGCTGCGTAATATGCCAAGGGAGAGAACTGCTTCTTCTCCACCGAATAGTCAGAATCCAAGCTCTGCTACTTCATCGGGTGGCGGTGCTACTAGTCCGGGAGCTTCTGGAGCAACGGCCAGTGGCACACCTACACCATCTGGAACGGGGAACACAGCGAACAATTCTGGGACATCGAAAGTGTTACTGGCGAAATTGAGGTACGGAAGGGAAGAGATGTTAGCATTGTATGACCGAAACACAGAAGCCCCAGCTGAACTGAAAGCCATCGAAACCCTTTACCAACCTCGAGGAAAACCACCTGCAGCCCTAGACAACACATTTGAAGAAGAGCGCGACACTGCACGCAGTGTCCCACCCACAGGGGGAGCCCCGTCGGGAGAAAGGTATGGGATGGGACGAGGCGCCGGACGTGGGCATCATCCAGTAGAAGGACGTGGAAGGGGCAGGGGCATGTTTATACGACAAACACCGACAGTCAGAAGTTCTTCTTGGCATGTCATAAACCCAAGGATGCCGTTGTACAGTGGACCCGAAGATGACCCAGTGCCTCCCAATAGAAGTTGGAGTGCCAGTAATCCACCTAATAATAGAAATAGTGGAGAACAAACTGATTGGACCCCAAATAAACCATATCGGAACAAACGGCCAGGTCCGAACACAAACTGGCGTCAATCCTCTCGAGATGAAGGAGATGAGTGGCGTGCCGATACGAGTCGATCTAGAGGTCAGGACAAATGGGATCGTGACTGGGGTGAAAGACCAAATCAAGAAAAGCAATCATGGAATCCAAATCGCCGCAATTGGGCGGGGGATGATGACAATTTGCCTGAATGGGCCATGGAGAACGCCGAAGCTTGCGGTGGTACGTTTGATTCCTCCGGTGCTTTTCATGGATACAGCAATGATGACAGCAACTTACCCAAAAACCAAGACAACGTATATCCGTTAACGCGTTCACATACCCATGGAAGCTTTGCTCGTCAGAAGACTGTCGAGGAAGGCTCTGAAGAGTGGTGGGCCTCAGAGAAGGCCAAAAAATTGTCGCCCAAACGCTTTGATGCTGGTGACATAAAATTCAAGAAGCCAGCCAGTGCTGCGATCCCAGAGGCAAGTGCTAACATTGCAGTGAAAACGTTATCTGCCAAAGATGATCAAATTGATGATGAAGAATCTGAAAAGGATTCGGATGCCACTGTCAGCGATAGTCCTCCGGAGACTCCAAAGAAGGCTATAGTGCCTAAAGAAAAGAAGGAAGATGAAAAGAAAGAGAAAGTGAATAAGAAACCTTTGCCGAAGCCTAAATTTACAGAGGTTAAACCTTTTGAGAGTCTTATGCGTTCCGAGAGCAAGACTAAACAGACTAATGAAGACAATTTCAAATCTGCCATGATGATGCCACCTAACAACAATTTGCGCCAGAAGCACCAAAATATTGTTTCGCCCGTAGGAGACTCGCATGAGAAGCAGGAACGCCAACCTGGGATTTTGCGTTTGCCAAGTTCTCAAGATAAGATTAATAAATCAGCAGAAAACAAAATTGTCGATGATCTTTTTGACTTAGCTCTAGAAGATAAGGACATCCTCCAGAAGTTGCCCAAGTCCACCAACTCTTCTTTGTTGGCTGCGGCAAATCAACAGAGCTCTATGATGCCTGGAGGATTATCCGCAGTAGTCCATCCTCGTCCTGACATACACGCTTCAATGTTTAGTGTGCCACCTCCTATGCTTCCGGGACAGGGCATGGCCATAAATCCAAATAAGACCATTTTGCCGCCACCAAATATGCAGTCTGGACTGCAACCGGGCATGATACAAGTTGGAATCACAAACAATGCTTTGAATGCCTCTCTCGGTCTACCAATTGCCCGTCCCAATATTGGGCTTCCGATTACTGGAGTTCCACCACCTATGCTTTCTAATCAGATGTCCAATACTGGACTTGGCGGTGGTGCATTACAGAACCCATTGGGTGTAGGAGGAATGCAGAGTGGACCGACAGGCCTGGCTGGATATCAAGGTGGTGGAATTTCGGGTCTTGGCACACCCAATCTTGTAAACAATTCGTTGTTCATGGGACAAAATAGTAACAATTCATCGATGTCATCCCCGGGCGATATCCCCATGCCTAACCATAACAACCAGTCCAATATGTTCCCGATGCATGGACTTCAACATTCTGGGAATCAAGCTGGAACATTTAATTCCATTTACAACAGCTTGATGCAGCACACATCTGTGCCGCCACCGTCGACTGCTCATAGCTTGTCTGACCAGTGGTACTACGAGGACCCGAAAAAAATGATCCAAGGGCCATTCACTTCGAAGGAAATGTACAATTGGTATAGGGCCGGATTCTTTAGCTCGACCCTGATGGTACGTCGGGCCTGTGACACCTTGATGAGACCGCTCGGCTCTTATGGCCCTGTGGTGCCTTTTGCGCAAATGGACATGATGTCGTATAGCAATCCTCATGATAACATGCTGAATCCGCAGTCGAGCCTCGGACTGGATGTCATGAACATGCATTTATCGGATAACACTCCTGTAGATTCTATACAATTTGGTACCGTTGGACTAATGGGAAACCCACCATACGGCCAAGTTCCAATGGTTGAATCGCTTTGGAATCCGCCGTCTTCCACATCTGACATGATGTGGATGCAGCACAGCGTCAACACGCGTAACGAGAATCGCGTCAACATTCTGCCGATGTCGTTCTGGGATCAGCCGTCTGCGATCACTCCTCACGCCTTGCTCCCGGAGGAAATTGCCAAAGAAATGAAGACCGAGGATCAGATTCTTGCACAGCTGAGGGCGTCGCAGAATATTTCTTCAACACAGGTGCCATTCTTGAGCGACCAGGCTACTACTTCGACGTCTAACAAAAGCGATTTCACTCAAACAACGAGCGCAACTCCCACCTTGGAGGAACTTCAGAAACTCATGCAGAAGGAATCGCTTATCGCTACTCCCAAGCCTACGGTTAGCGAATCGAGCGTAGCTGTTGAACAGCCAAAAACGGAAAAGCCGCCGAAACCGGAGGCGGTCGAGACGCTCGTAACGAAACAGCAACAGCAGAAAAATCCCGAACCAAAGGCTAAATCTCGAAATGAAAACGAGAAGAACGTTAAAAAACAAGAGAACAATGCTAAGAACAAGACGAAGAAGTCGAAAGACGATAAGAAAGATGATTCTGATCTTAAAGTTAAAGATGACGATGTTAAATTAGAGAAAAGATCTTCGGAACCTTCGCCTACGAAAAGTAAAAAAGAAGAGAAGGTCAATAAAAAGGATATCGAGAAAGAAAAAAAGGAATGGATTAAGGAGGGTTTCACGATTGTGAAAGGTTCGGAAAAGGGTAATAATAAGGATGTCAAGCGTAAAGCGATAGAGGCGAGAGCAGTTGAGGAAGCGGAACGTAAAAGGAAGGAAGAGGAGAAATTGGCAGCAGATGAAGAGAAAAAAAAGAAACAGTCCGAGGCGATTAAAAAGCAACAAGACGTTCAACAGCCACCACCGAAACCGTCTACGGTCGAGTCGGTGGCGAAGAAGGCGCCGTGGTCGGTCGCGAATCACACTCTGCACGCGCCCAACAAGGACGGGCTCAACCTCGCCGAGATCCAACGCCTCGAGCGCGAGAAGAAGCTCGAACAAATGAAAGAGCAGCAGCAGATGATGCACATCATCGCTCAACAGCAGGCCGTCGCTATGGCCCGCGATCAGGAAATGCAGGCCGGTCTAGGAGGATGGGGTAAGAAGAAAACTACTCTTCCCATTGGAACTCCCAGCCAGACTTTAGCCGAGATACAGGCAGAGGCAAAGAAGCAGGCGGCGACCCTGGCCGCAGTTGCTGCTTCTATCATGGAGGAGCCACTGATATCTAACCAACCACAGCCCAATCACGCGCCGTGGAACAACTCTGCAAATGATATATTACTAGGTGGATTTTGGGATACACCACAAACTAGCCAACCAACGAAGGTCGAGAAGCCTCAGGCGGTCGAGTCGTCACCGAAGCCAGCCGAAACCAACAAGAACAAGAAGAAGCTAACCTTCGTGCCGCTAGTGAAGAAAGAGATCTCGCCCGCTGTCGAATTCGAGAACTGGTGCACCAGCGCTTTGTCCTCGTGGAGCTCTAAAGTTGATGTGCCGACTTTCGTTGGCTTTTTGAAGGACATCGAATCACCGTACGAGGTCAAGGACTACGTGAAGTGCTATTTGGGAGAATCGAAGGATTTGAACGATTTCTCTCGTCAGTTCTTGGAGAGAAGGTCCAAGTTGCTGCGCGTCGGAATGGTGACGCCTTCGGATGATCTTTGTTCGCCCGCGATCGCGATCAATCCGCGCACCAACTCCGGCTCCGACTACCAGGAAGTCAAGGGCAAAGGGAAGAAGGCCAAGAAGAACAAAATGTTGAAGGTCGACGCGCGCATCCTGGGCTTCTCGGTGACCGCCTCCGAGGATCGCATCAACGTCGGCGACATAGACACCGTGTGA

Protein

MGDRSNPIKFGPLWLRNMPRERTASSPPNSQNPSSATSSGGGATSPGASGATASGTPTPSGTGNTANNSGTSKVLLAKLRYGREEMLALYDRNTEAPAELKAIETLYQPRGKPPAALDNTFEEERDTARSVPPTGGAPSGERYGMGRGAGRGHHPVEGRGRGRGMFIRQTPTVRSSSWHVINPRMPLYSGPEDDPVPPNRSWSASNPPNNRNSGEQTDWTPNKPYRNKRPGPNTNWRQSSRDEGDEWRADTSRSRGQDKWDRDWGERPNQEKQSWNPNRRNWAGDDDNLPEWAMENAEACGGTFDSSGAFHGYSNDDSNLPKNQDNVYPLTRSHTHGSFARQKTVEEGSEEWWASEKAKKLSPKRFDAGDIKFKKPASAAIPEASANIAVKTLSAKDDQIDDEESEKDSDATVSDSPPETPKKAIVPKEKKEDEKKEKVNKKPLPKPKFTEVKPFESLMRSESKTKQTNEDNFKSAMMMPPNNNLRQKHQNIVSPVGDSHEKQERQPGILRLPSSQDKINKSAENKIVDDLFDLALEDKDILQKLPKSTNSSLLAAANQQSSMMPGGLSAVVHPRPDIHASMFSVPPPMLPGQGMAINPNKTILPPPNMQSGLQPGMIQVGITNNALNASLGLPIARPNIGLPITGVPPPMLSNQMSNTGLGGGALQNPLGVGGMQSGPTGLAGYQGGGISGLGTPNLVNNSLFMGQNSNNSSMSSPGDIPMPNHNNQSNMFPMHGLQHSGNQAGTFNSIYNSLMQHTSVPPPSTAHSLSDQWYYEDPKKMIQGPFTSKEMYNWYRAGFFSSTLMVRRACDTLMRPLGSYGPVVPFAQMDMMSYSNPHDNMLNPQSSLGLDVMNMHLSDNTPVDSIQFGTVGLMGNPPYGQVPMVESLWNPPSSTSDMMWMQHSVNTRNENRVNILPMSFWDQPSAITPHALLPEEIAKEMKTEDQILAQLRASQNISSTQVPFLSDQATTSTSNKSDFTQTTSATPTLEELQKLMQKESLIATPKPTVSESSVAVEQPKTEKPPKPEAVETLVTKQQQQKNPEPKAKSRNENEKNVKKQENNAKNKTKKSKDDKKDDSDLKVKDDDVKLEKRSSEPSPTKSKKEEKVNKKDIEKEKKEWIKEGFTIVKGSEKGNNKDVKRKAIEARAVEEAERKRKEEEKLAADEEKKKKQSEAIKKQQDVQQPPPKPSTVESVAKKAPWSVANHTLHAPNKDGLNLAEIQRLEREKKLEQMKEQQQMMHIIAQQQAVAMARDQEMQAGLGGWGKKKTTLPIGTPSQTLAEIQAEAKKQAATLAAVAASIMEEPLISNQPQPNHAPWNNSANDILLGGFWDTPQTSQPTKVEKPQAVESSPKPAETNKNKKKLTFVPLVKKEISPAVEFENWCTSALSSWSSKVDVPTFVGFLKDIESPYEVKDYVKCYLGESKDLNDFSRQFLERRSKLLRVGMVTPSDDLCSPAIAINPRTNSGSDYQEVKGKGKKAKKNKMLKVDARILGFSVTASEDRINVGDIDTV

Uniprot

A0A2A4J8E1 A0A2A4J7G3

EMBL

NWSH01002539 PCG68026.1 PCG68025.1

Proteomes

UP000218220

Pfam

PF02213 GYF

Interpro

IPR035445 GYF-like_dom_sf + More
IPR003169 GYF

SUPFAM

SSF55277 SSF55277

Gene 3D

3.30.1490.40

CDD

cd00072 GYF

ProteinModelPortal

A0A2A4J8E1 A0A2A4J7G3

PDB

3K3V E-value=0.00176933, Score=104

KEGG

101743001 K18730 PERQ amino acid-rich with GYF domain-containing protein | (RefSeq) PERQ amino acid-rich with

GO

GO:0005515 GO:0008270 GO:0004559 GO:0005975 GO:0003824 GO:0006013 GO:0015923 GO:0030246 GO:0007169 GO:0016021

Length:

1512

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00000

outside

1 - 1512

Pi

2.217589

Theta

18.696252

Tajima's D

0.036791

CLR

0.013316

CSRT

0.385830708464577

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics