Gene

KWMTBOMO00538

Pre Gene Modal

BGIBMGA012328

Annotation

PREDICTED:_proton-coupled_amino_acid_transporter_1_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(+):15796286-15839966      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.923

CDS

ATGATAGCCGAATATGATTCCAAGAAAAAAGGAGTCAGAAATGATTTATCCGATGTTGTTATGATCAAATACAATGTTGACCCAAGTGAGATCCCAGTGGAACAACAGGCGGGCTCGACCCTACCTCTTATGGAGATCCCGGGAAAGGATGTCGAGGCAGACGAGGACTATAATCCCTTCGAACACCGAAAACTTGCTCACCCTACCTCTGACATGGATACTTTAATTCACTTGCTGAAAGGTTCACTGGGCAGTGGTATTCTTGCCATGCCAATAGCATTCAAAAATGCTGGTCTTTTCTTCGGTCTGTTCGCGACTTTTGCCATCGGAGCTATCTGCACCTACTGCGTACATGTCCTGGTGAAAACTGCTCATGAGCTATGCAGACGCATGCAAAAGCCTTCATTAGGTTTCGCCGAAACAGCTGAAGCTGCTTTCTTATCTGGGCCGCCATCAATGCATAAATTTTCCAGACTCGCCAAAGCAATGGTTAACTGGTTCTTGGTATTAGATTTGCTGGGCTGTTGCTGCGTCTACATCGTATTCGTTTCCAAAAATGTAAGCCAAGTAGTTGACTACTACGCCGAAGGAACTTCATTCCACAATCTGCATATCCGAGTCTACATGGCTGCTCTTTTGCCATTCCTCATCATGATGAATCTTATTCGGAACTTGAAGTACTTAGCGCCTTTTTCTATGATTGCGAATGTATTGGTTGGAACTGGAATGGGAATCACCTTCTACTATCTATTCCAAGATATCCCTAGTGTGAGTGAAAGGGATTCCTTTGCTGAGATCTCAACCTTACCAATATTCTTCGGTACCGCTATCTTTGCCTTGGAGGGAATCGGCGTGGTGATGCCCTTGGAAAACAACATGAAGACTCCTACTCACTTCATTGGATGCCCCGGAGTATTGAACACTGGAATGTTTTTCGTCGTAACTCTCTACGCGTTCACAGGATTCTTTGGTTATCTGAAGTACGGAGATGAGACCAAAGGCAGTATTACCTTGAACTTACCGGAATCCGAGAAGCTGGGTCAATGTGTGAAACTTATGATTGCCACGGCCATATTCTTCACGTACAGTCTACAGTTCTACGTCCCAATGGAAATCATTTGGAACAACGTCCGTCACTGGTTTGGAGCTAAGAAGAATCTTGCCGAATACAGCATCAGGATCGCTTTGATTGTGATGACGGTTTGCATCGCTATAGCTATTCCGGATCTTGGACCATTCATTTCTTTAGTCGGGGCTGTCTGCTTATCATTCCTCGGATTGATCTTCCCTGCTATTATGGAAACTGTTACCTTCTGGGACCGACCGAACGGCTTGGGACGTTTCAATTGGGTTCTCTGGAAAAACGTATTCATGATCTCCTTCGGTATTCTCGGGTTCTTGACAGGTTCATATGTCAGCATCGTTGAAATTATTGAAGGATCTAGTAATTAA

Protein

MIAEYDSKKKGVRNDLSDVVMIKYNVDPSEIPVEQQAGSTLPLMEIPGKDVEADEDYNPFEHRKLAHPTSDMDTLIHLLKGSLGSGILAMPIAFKNAGLFFGLFATFAIGAICTYCVHVLVKTAHELCRRMQKPSLGFAETAEAAFLSGPPSMHKFSRLAKAMVNWFLVLDLLGCCCVYIVFVSKNVSQVVDYYAEGTSFHNLHIRVYMAALLPFLIMMNLIRNLKYLAPFSMIANVLVGTGMGITFYYLFQDIPSVSERDSFAEISTLPIFFGTAIFALEGIGVVMPLENNMKTPTHFIGCPGVLNTGMFFVVTLYAFTGFFGYLKYGDETKGSITLNLPESEKLGQCVKLMIATAIFFTYSLQFYVPMEIIWNNVRHWFGAKKNLAEYSIRIALIVMTVCIAIAIPDLGPFISLVGAVCLSFLGLIFPAIMETVTFWDRPNGLGRFNWVLWKNVFMISFGILGFLTGSYVSIVEIIEGSSN

Uniprot

H9JS18   S4P9N7   A0A0L7KRE4   A0A1E1WKV8   A0A212EKG6   A0A2H1VCT6   + More
A0A194PFS3   A0A194QLI2   F4WE43   A0A151JRF8   A0A195BBC7   A0A154PBN8   A0A151JYP8   A0A151X3R2   A0A195CP10   E2BJJ1   A0A088AJT7   K7JB18   V9ID24   A0A2A3EI11   A0A0N0U7Q8   E2ASE4   A0A310S756   E9IG15   A0A0L7RK76   A0A0T6BEU7   A0A0C9RHK6   A0A1Y1NBW2   A0A1Y1NE78   A0A158NAG7   A0A1B6DQ99   A0A1B6E4V7   A0A1B6JE18   A0A1B6GFV2   V5I8J7   A0A1W4WXD7   A0A1B6KPD0   A0A1W4WYN7   A0A1B6KHZ3   A0A1L8DDW9   A0A1L8DDJ4   A0A2L0RID4   A0A2J7PW27   A0A1W4WMQ2   N6UDN4   A0A2M3YZF3   A0A084W8L1   U4U1N4   A0A2S2QYS6   A0A182KA57   A0A182KTL4   A0A182XJL1   A0A182VEC7   A0A1Q3FJZ8   A0A1Q3FJE8   A0A1Q3FJT2   A0A182TW42   A0A182HRI8   Q7PM43   A0A182YR05   A0A1Q3FKZ9   B0WVR2   A0A2C9GL31   A0A139WJW5   A0A1S4JWS2   A0A1B0CTW6   A0A182PCB0   A0A2L0RIE5   A0A0K8TQ57   A0A2H8TWY0   A0A182LX02   A0A182QCM2   A0A224XBK8   A0A0V0G3I9   A0A182RR74   A0A2M4CTL0   A0A2M4CTK4   W5JKP5   A0A2M4CTU7   A0A069DU01   A0A182NAR7   A0A182J8J2   A0A182W913   A0A2M4A4A2   A0A0A9YUE0   A0A3L8D5L8   T1EAB7   A0A182F3V1   A0A0P4VW95   T1E7Y8   A0A0A9YVX6   T1IBH5   A0A2M4A3X2   A0A0K8SD30   A0A182H342   A0A1Y0AWB0   A0A2M4BM04   Q173C1   A0A2M4BL63   A0A1S4FFU4  

Pubmed

19121390    23622113    26227816    22118469    26354079    21719571    + More
20798317    20075255    21282665    28004739    21347285    23537049    24438588    20966253    12364791    14747013    17210077    25244985    18362917    19820115    26369729    20920257    23761445    26334808    25401762    26823975    30249741    27129103    26483478    28341416    17510324   

EMBL

BABH01017075    BABH01017076    GAIX01005381    JAA87179.1    JTDY01006918    KOB65594.1    + More
GDQN01009486    GDQN01003405    JAT81568.1    JAT87649.1    AGBW02014274    OWR41976.1    ODYU01001598    SOQ38044.1    KQ459605    KPI91878.1    KQ461196    KPJ06418.1    GL888102    EGI67481.1    KQ978623    KYN29721.1    KQ976532    KYM81520.1    KQ434869    KZC09306.1    KQ981463    KYN41501.1    KQ982557    KYQ55057.1    KQ977481    KYN02380.1    GL448571    EFN84148.1    AAZX01012567    JR040212    AEY59033.1    KZ288238    PBC31360.1    KQ435703    KOX80324.1    GL442298    EFN63610.1    KQ766578    OAD53684.1    GL762906    EFZ20489.1    KQ414579    KOC71141.1    LJIG01001072    KRT85868.1    GBYB01012682    JAG82449.1    GEZM01007460    JAV95179.1    GEZM01007459    JAV95180.1    ADTU01000001    GEDC01009434    JAS27864.1    GEDC01004350    JAS32948.1    GECU01010339    JAS97367.1    GECZ01008444    JAS61325.1    GALX01004565    JAB63901.1    GEBQ01026668    JAT13309.1    GEBQ01028900    JAT11077.1    GFDF01009554    JAV04530.1    GFDF01009553    JAV04531.1    KY448282    AUZ41739.1    NEVH01020938    PNF20537.1    APGK01026501    KB740635    ENN79815.1    GGFM01000847    MBW21598.1    ATLV01021492    ATLV01021493    KE525319    KFB46555.1    KB631992    ERL87779.1    GGMS01013682    MBY82885.1    GFDL01007187    JAV27858.1    GFDL01007338    JAV27707.1    GFDL01007257    JAV27788.1    APCN01001708    AAAB01008980    EAA14383.5    GFDL01006817    JAV28228.1    DS232131    EDS35669.1    KQ971329    KYB28338.1    AJWK01028053    KY448285    AUZ41742.1    GDAI01001325    JAI16278.1    GFXV01006496    MBW18301.1    AXCM01000562    AXCN02000660    GFTR01006620    JAW09806.1    GECL01003464    JAP02660.1    GGFL01004506    MBW68684.1    GGFL01004508    MBW68686.1    ADMH02000832    ETN64927.1    GGFL01004507    MBW68685.1    GBGD01001301    JAC87588.1    GGFK01002239    MBW35560.1    GBHO01008358    GDHC01000682    JAG35246.1    JAQ17947.1    QOIP01000012    RLU15787.1    GAMD01000587    JAB01004.1    GDKW01001632    JAI54963.1    GAMD01002647    JAA98943.1    GBHO01008356    JAG35248.1    ACPB03000224    GGFK01002176    MBW35497.1    GBRD01014618    GBRD01014617    JAG51208.1    JXUM01024141    KQ560681    KXJ81292.1    KY921793    ART29382.1    GGFJ01004667    MBW53808.1    CH477427    EAT41139.1    GGFJ01004666    MBW53807.1   

Proteomes

UP000005204    UP000037510    UP000007151    UP000053268    UP000053240    UP000007755    + More
UP000078492    UP000078540    UP000076502    UP000078541    UP000075809    UP000078542    UP000008237    UP000005203    UP000002358    UP000242457    UP000053105    UP000000311    UP000053825    UP000005205    UP000192223    UP000235965    UP000019118    UP000030765    UP000030742    UP000075881    UP000075882    UP000076407    UP000075903    UP000075902    UP000075840    UP000007062    UP000076408    UP000002320    UP000007266    UP000092461    UP000075885    UP000075883    UP000075886    UP000075900    UP000000673    UP000075884    UP000075880    UP000075920    UP000279307    UP000069272    UP000015103    UP000069940    UP000249989    UP000008820   

PRIDE

H9JS18   

Pfam

PF01490   Aa_trans

Interpro

IPR013057   AA_transpt_TM       

ProteinModelPortal

H9JS18   S4P9N7   A0A0L7KRE4   A0A1E1WKV8   A0A212EKG6   A0A2H1VCT6   + More
A0A194PFS3   A0A194QLI2   F4WE43   A0A151JRF8   A0A195BBC7   A0A154PBN8   A0A151JYP8   A0A151X3R2   A0A195CP10   E2BJJ1   A0A088AJT7   K7JB18   V9ID24   A0A2A3EI11   A0A0N0U7Q8   E2ASE4   A0A310S756   E9IG15   A0A0L7RK76   A0A0T6BEU7   A0A0C9RHK6   A0A1Y1NBW2   A0A1Y1NE78   A0A158NAG7   A0A1B6DQ99   A0A1B6E4V7   A0A1B6JE18   A0A1B6GFV2   V5I8J7   A0A1W4WXD7   A0A1B6KPD0   A0A1W4WYN7   A0A1B6KHZ3   A0A1L8DDW9   A0A1L8DDJ4   A0A2L0RID4   A0A2J7PW27   A0A1W4WMQ2   N6UDN4   A0A2M3YZF3   A0A084W8L1   U4U1N4   A0A2S2QYS6   A0A182KA57   A0A182KTL4   A0A182XJL1   A0A182VEC7   A0A1Q3FJZ8   A0A1Q3FJE8   A0A1Q3FJT2   A0A182TW42   A0A182HRI8   Q7PM43   A0A182YR05   A0A1Q3FKZ9   B0WVR2   A0A2C9GL31   A0A139WJW5   A0A1S4JWS2   A0A1B0CTW6   A0A182PCB0   A0A2L0RIE5   A0A0K8TQ57   A0A2H8TWY0   A0A182LX02   A0A182QCM2   A0A224XBK8   A0A0V0G3I9   A0A182RR74   A0A2M4CTL0   A0A2M4CTK4   W5JKP5   A0A2M4CTU7   A0A069DU01   A0A182NAR7   A0A182J8J2   A0A182W913   A0A2M4A4A2   A0A0A9YUE0   A0A3L8D5L8   T1EAB7   A0A182F3V1   A0A0P4VW95   T1E7Y8   A0A0A9YVX6   T1IBH5   A0A2M4A3X2   A0A0K8SD30   A0A182H342   A0A1Y0AWB0   A0A2M4BM04   Q173C1   A0A2M4BL63   A0A1S4FFU4  

KEGG

101742709    K14209 solute carrier family 36 (proton-coupled amino acid transporter) | (RefSeq) proton-coupled am

GO

GO:0016021   GO:0015171   GO:0003333  

Length:

483

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

232.67926

Exp number, first 60 AAs:

0

Total prob of N-in:

0.79696

inside

1  -  74

TMhelix

75  -  94

outside

95  -  98

TMhelix

99  -  121

inside

122  -  163

TMhelix

164  -  183

outside

184  -  202

TMhelix

203  -  222

inside

223  -  228

TMhelix

229  -  251

outside

252  -  265

TMhelix

266  -  288

inside

289  -  300

TMhelix

301  -  323

outside

324  -  351

TMhelix

352  -  374

inside

375  -  385

TMhelix

386  -  408

outside

409  -  412

TMhelix

413  -  435

inside

436  -  455

TMhelix

456  -  478

outside

479  -  483

 

 

Pi

22.932232

Theta

21.154437

Tajima's D

-1.539018

CLR

0.021497

CSRT

0.0542972851357432

Interpretation

Possibly Positive selection