Silkworm Genome Informatics Database

Gene

KWMTBOMO00537

Pre Gene Modal

BGIBMGA012260

Annotation

PREDICTED:_protein_AF-10_isoform_X4_[Bombyx_mori]

Location

Bomo_Chr1(-):15740918-15773905 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.009

CDS

ATGGTCGGAGGATGCTGTGTATGCTCTGACGAGCGGGGTTGGCCGGACAACCCTTTGGTCTACTGCGATGGAAATGGATGCACTGTTGCCGTACACCAAGCTTGCTATGGAATTGTTACAGTACCAACTGGTCCTTGGTACTGCCGAAAATGTGAGAGTCCTGACACAAAGGGAAAAGTTAGATGTGAGCTTTGCCCATCAAAATCGGGCGCATTAAAACGGACAGACACAGGTGGATGGGCGCACGTTGTATGCGCCCTCTACATACCAGAAGTACGATTTGGAAATGTTACTTCTATGGAACCTATTGTTCTCAGACTCATACCACCTGAGCGTTACAACAAGACATGCTACATTTGCCATGATCTGGGCAAGTCTCATAGGGCAACTGCAGGCGCTTGTATGCAATGCAACAAATCAGGATGTAAACAGCAATTTCACGTGACTTGCGCCCAAAGTTTGGGCTTCCTATGTGAAGAAGCAGGCAACTATCTCGACAACGTCAAGTACTGCGGCTACTGCCAACACCACTACAGCAAATTGAAAAAGGGTGGCAATGTGAAGACTATTCCGCCGTACAAGCCAGTCCCTCATGACAGTCACTCGAGTGACTCGAGCTGCGAAAAGGAGGGCGGTAACTCTCCTGTGACCACCGGAAGTGTCACGCCAACACATGCTGGCAAATCTAAAGGGCCCGGACGCAAATCGTCGCACGCTAGTGGCTCAGGTTCTGGCAAAAACGCTCCTTCAACATCGAAGGCTTCGACTAGCACCGTTCAGCCTATGGAAACGGACCCGCCTGAAGCTCCACCGGTATCGCGTAAACACAAAAGCGGAGACAAAAACAAAAAGAAGCCGTCGCCTTCACGGCGTGGCTCGTCAGCCGGTGACGCAGGCGGTTCTGGAAGCAAATCGAGCACCCCGGCGCCGTCACCTCAACACTCTGCAGAAACATCGCAAACTCAAAGCGCTAAAGCGGGTGGTTCGACCCCTAAAGCACCGCCGCCGCCAGCCTCGCCGAGCGGTTCCAAGCCTCCCGAACCAGTGGGAGTCATAAGCTCGGTAGCGTCTGCTACTGCGACCCCCGTGTCCACAATTACTGCTCCAGCTAGTGCTGCGGTATCGACGTCTGTGGTACAAATACCTCTGCCGAAGCCGACTTACCAAGAGACAGTAATCACGAACACTGAAGCGATGGAAACGAAACAAACGAAAAAGCGTAAAGCTGTAGCGAGCGCTGCAGCTGCTGCCGCCGCAGCCGCCGCCGCCGCGGCCGCTGCCAATGCGGCTCTAGACTACGGACCGAGTACTTCATCAGCCATGTTGGATGCTAACGGTAACATACCGGGCGGCTGTAATTGGGAGGCGGGGCCCTCGTGTTCTTCAGAAATGCAAGAACATGAAAAGTACATCAAAAAGGCTAAGACGGATCATCCCGAGCCTCTGAACATGCAGAGCCACTACAACCCGATTGCACCACCACCACCGCCTCCGCCACCAGCCCACAGCCCTGCTTCTCAACCGAGCCCTAGGTACCATCACAGACACCTGCCGAGCCCAATGCCTGGCCCGAGCGGTCTGAATCCTGTATCGACTATACGATCGCCTTCACAGCCTCAGGGCGGGAAGGCCGACCGTGACGGACCAACGTCGCTCCTCGTGTCGGTGCCGTTACCCTCCACGAGCCATGGACTGAACCTCTCCGCACACCCACAGGTTTCGGTTCAATCTGAAATTCCTGGTCCATCGCAGCATATTTTCCATCAGCCACAACCACAAAAGCCAACTTCTATGGAACAGCCTGGCGTCTCAGGGCATTCACCGCATACCGTTCCTGGTCGCTCTTCTTGGGGTGGTCTGAACGTTGCCTACGAAATGCAGCAAGATCCAAATAAACCAGGTGTCAGTGGGATGGCCAGTACTAGCAAAGACAATATGGGCCCGGTTCCCATATGCCCGATGCCGCCGGCTATCAGGAACAAGAAACGAGCAGCGATGGCGTCTGTCGTCAACATGGCGCCGGCTCCTATGCTTCCTGGTCCTTCCGGTCCTCCATGTCCACCAGGACCGTCTGCAATACAAACTTCGGGTACACAATCATTGGCTAATGTACGCCGTCAACCGCAGCAGACCCCGCCTCCGATATACCAGGAAACTATCAAAGATTCACCTCCAAGCTCGCCAGGTACAGAACGCGCCATGAAACCGAAAATGGAAACAAAGATTGGCCCGAGTTGTACAGCGCCGCACATGCTCGGCAACGAATTGAATCCGGAAAGTGGGGCTGCGGCCCGGCTTCAAGAGCAACTGAGCGCCGAGCTGGCCGCACATGCCGCCGGGAGCGGTGGTCCAGACCCACTGATTCCGCCACCGCTCATCAACAAGGCCGGAACAGGTGCTGGAGGCCCAGCGGGACGTAGTTCTTCGAGTGCTCAGAGCCTCGATCAGCTGCTCGAGCGTCAGTGGGAGCAGGGATCGCAGTTTTTAATGGAGCAAGCCCAGCACTTCGATATAGCATCACTACTCTCATGCCTGCACCAGCTCCGCACGGAGAACGTGCGTCTGGAGGAGCATGTGGGTAGTCTGCTACAGCGTCGTGACCATCTGCTTGCAGTGAACGCTCGTCTCGCGATACCTCTCACCGCCATGTCTGCGGGTCCCCCCGAACCACCAAGATGCGCCCGGGACAGCGGGTCCCAGATGCGCGGCCCGCCACCGCCTGTACGCGCCACCGAGACCATCACCTCTGACCGGTCCCACCAGCTTATGATGCGTGATATGCAACAAAAGCCCAGCTGA

Protein

MVGGCCVCSDERGWPDNPLVYCDGNGCTVAVHQACYGIVTVPTGPWYCRKCESPDTKGKVRCELCPSKSGALKRTDTGGWAHVVCALYIPEVRFGNVTSMEPIVLRLIPPERYNKTCYICHDLGKSHRATAGACMQCNKSGCKQQFHVTCAQSLGFLCEEAGNYLDNVKYCGYCQHHYSKLKKGGNVKTIPPYKPVPHDSHSSDSSCEKEGGNSPVTTGSVTPTHAGKSKGPGRKSSHASGSGSGKNAPSTSKASTSTVQPMETDPPEAPPVSRKHKSGDKNKKKPSPSRRGSSAGDAGGSGSKSSTPAPSPQHSAETSQTQSAKAGGSTPKAPPPPASPSGSKPPEPVGVISSVASATATPVSTITAPASAAVSTSVVQIPLPKPTYQETVITNTEAMETKQTKKRKAVASAAAAAAAAAAAAAAANAALDYGPSTSSAMLDANGNIPGGCNWEAGPSCSSEMQEHEKYIKKAKTDHPEPLNMQSHYNPIAPPPPPPPPAHSPASQPSPRYHHRHLPSPMPGPSGLNPVSTIRSPSQPQGGKADRDGPTSLLVSVPLPSTSHGLNLSAHPQVSVQSEIPGPSQHIFHQPQPQKPTSMEQPGVSGHSPHTVPGRSSWGGLNVAYEMQQDPNKPGVSGMASTSKDNMGPVPICPMPPAIRNKKRAAMASVVNMAPAPMLPGPSGPPCPPGPSAIQTSGTQSLANVRRQPQQTPPPIYQETIKDSPPSSPGTERAMKPKMETKIGPSCTAPHMLGNELNPESGAAARLQEQLSAELAAHAAGSGGPDPLIPPPLINKAGTGAGGPAGRSSSSAQSLDQLLERQWEQGSQFLMEQAQHFDIASLLSCLHQLRTENVRLEEHVGSLLQRRDHLLAVNARLAIPLTAMSAGPPEPPRCARDSGSQMRGPPPPVRATETITSDRSHQLMMRDMQQKPS

Uniprot

A0A2H1V4Y8

EMBL

ODYU01000703 SOQ35915.1

Interpro

IPR011011   Znf_FYVE_PHD        + More
IPR001965   Znf_PHD
IPR013083   Znf_RING/FYVE/PHD
IPR019787   Znf_PHD-finger
IPR019786   Zinc_finger_PHD-type_CS
IPR034732   EPHD

SUPFAM

SSF57903 SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

A0A2H1V4Y8

PDB

5DAH E-value=2.46643e-82, Score=782

KEGG

101742568 no KO assigned | (RefSeq) protein AF-10

GO

GO:0046872 GO:0005515 GO:0008270 GO:0004559 GO:0005975 GO:0003824 GO:0006013 GO:0015923 GO:0030246 GO:0007169 GO:0016021

Length:

932

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

2.442

Exp number, first 60 AAs:

0.05783

Total prob of N-in:

0.09525

outside

1 - 932

Pi

22.795352

Theta

22.557237

Tajima's D

0.297579

CLR

0.07159

CSRT

0.460926953652317

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics