Gene

KWMTBOMO00536

Pre Gene Modal

BGIBMGA012263

Annotation

sensory_neuron_membrane_protein_3_[Spodoptera_litura]

Location

Bomo_Chr1(-):15669841-15723235      View in EpiBrowser

Full name

Sensory neuron membrane protein 2       + More
Sensory neuron membrane protein 1      

Location in the cell

PlasmaMembrane   Reliability : 4.743

CDS

ATGTGTGGTATAGTCGTGAGCATTGTAATTTTGGTGGTTGGGGCTTCACTTGTGCTGGTCAGCACCATCGTGGGTTTCGCGGTTGTTCCTGGAATAGTAGAAAATATGATCATCGACTCGGTGGTGCTGTCTGACGATTCCCAACAGTTTGAGAGGTTCCAGGAGGTACCGTTTGGCTTAAATTTCTCCGTAACATTATTCAACATCGAAAATCCTGCAGAAGTTTTGGAAGGTGGCGTGCCGAACCTCACAGAACGCGGACCTTATATTTACAGGTTACGACAAAACAGAATCATATCTAACGAAGAAGAGGACAAATTAACGTACAACAGATTGGAGAATTTTGAATTTAACGAGAGAGCATCATTCCCGTTCACCGAAGATGACATCGTTACCATTACCAACACCCCTTATCACGCCATCCTTCAGGTTGCTGAGAGTGCTTTTCCAGAAATGGCAAGCTTCTTACCAATGGTCATGAACGGAATCTTCGGTCAAAATAATAACGCCCCGATCATCGACATTCGAGTTGGTGATCTACTTTTCGACGGAATACCTCTGTGCAAAGACGCCGACCTCATCGGCCGCGTGGCCTGCAATTTGATCAGAAACATGACTGAAACGTCTCAGAACATTGAGACCCAGGACGACGGCTCTATGCTATTTACGGTTTTGGCTTATAAACAAAACAAGCCGACTGCTCCCTACAAAGTGTTGCGGGGTCTCAACGACCATACTGATCTTGGCCGAATTTTGAGCTACAATGAACGTTCAAGCCTCGAATACTGGGTTGATGAAGTCGATGAAGAAGGAGAGTCTATAGAGCCGAGCATCTGTAATACAATCAAAGGAACTGATTCAGCTATATTCCCGCCATTCGTTGACACCGGAAACAGTATTTTTGCACTCAACGCCGATATATGTAGATCGGTGGAGCTTCGCTATCAGTACGATACGGAGTACGAAGGTATCCCCACAAAGAGATTTTCGGCCAATGAGTGGTTTTTGGATAATGAAGATGGATGTTACTGTTTGAATGTGACTAAAGGTATCACTCAAGAGAACGGTTGCTTGTTGCGAGGAACTATGGAATTATTTACTTGCTCCGGCGCCTTCATGGTTTTATCGTATCCGCACTTTTTATACGCAGATCCAATATACAGAAATGGTGTCGTTGGTATGAACCCGGTTGAAGATAAGCACAGGATAATGTTGGATATAGAACCGAACACAGGAACTCCTGTAGTCGGAGCCAAGCGTGCGCAGTTTAATATTTTCATCCGCCCGATTTCGGGAATAGTGGCCACTGACAATATTAAAACTACATTAATGCCACTGTTTTGGGTTGAAGAGACTTCAAGACTTCCGCTAAATTTTGTAGAAGAGATTCAAGGAAGATTGTTGAGACCATTAAATTTGCTGAGTATTCTCATACCAGTAATTGTGGCTATTTGCTTTGTGATACTCGTAATAGGAATATTGGTCACAATCAGAGCCAGTTCAAAACGAAATAAGATTAAACAGTGA

Protein

MCGIVVSIVILVVGASLVLVSTIVGFAVVPGIVENMIIDSVVLSDDSQQFERFQEVPFGLNFSVTLFNIENPAEVLEGGVPNLTERGPYIYRLRQNRIISNEEEDKLTYNRLENFEFNERASFPFTEDDIVTITNTPYHAILQVAESAFPEMASFLPMVMNGIFGQNNNAPIIDIRVGDLLFDGIPLCKDADLIGRVACNLIRNMTETSQNIETQDDGSMLFTVLAYKQNKPTAPYKVLRGLNDHTDLGRILSYNERSSLEYWVDEVDEEGESIEPSICNTIKGTDSAIFPPFVDTGNSIFALNADICRSVELRYQYDTEYEGIPTKRFSANEWFLDNEDGCYCLNVTKGITQENGCLLRGTMELFTCSGAFMVLSYPHFLYADPIYRNGVVGMNPVEDKHRIMLDIEPNTGTPVVGAKRAQFNIFIRPISGIVATDNIKTTLMPLFWVEETSRLPLNFVEEIQGRLLRPLNLLSILIPVIVAICFVILVIGILVTIRASSKRNKIKQ

Description

Plays an olfactory role that is not restricted to pheromone sensitivity.

Similarity

Belongs to the CD36 family.
Belongs to the glycosyl hydrolase 22 family.

Keywords

Alternative splicing   Cell membrane   Complete proteome   Disulfide bond   Glycoprotein   Membrane   Olfaction   Receptor   Reference proteome   Sensory transduction   Transmembrane   Transmembrane helix  

Feature

chain  Sensory neuron membrane protein 2
splice variant  In isoform B.

Uniprot

A0A0K1DD11   A0A0K1DCZ0   A0A1E1W6Q1   A0A194QTX5   A0A194PL92   A0A0C5D1K3   + More
D6WGA2   A0A0Q9XLT1   A0A0R3P600   A0A0M4EY67   A0A0Q9WIA7   A0A0N8P0X5   A0A1W4VMN0   B4MY11   A0A139WK32   A0A3B0K2V3   A0A0R1DWB1   A0A0G2UMX4   E1JI63-2   A0A0J9RQQ6   H0RNK6   A0A034WD47   A0A0Q5U2G2   M3TYZ6   A0A0Q9XD94   A0A232FA70   A0A0S3J3G0   A0A0R3P663   A0A310S638   A0A2U9NK50   A0A0P6IZI1   A0A1Q3FQQ9   A0A0Q9WU97   B3M962   A0A1I8P8G9   V5I8K2   A0A1W4V9W1   A0A0Q9WYB0   A0A1I8MLR4   A0A3B0JY60   G0YYB3   A0A0R1DW87   A0A1B0CTG3   A0A0J9UGI3   H1UUH0   E1JI63   A0A0Q5UHH1   C3U0S3-2   A0A2U9NKV4   A0A1L8DK56   A0A0X8DC77   A0A1L8DJS2   A0A1W7R6N8   A0A1B1FKI5   A0A1Q3FQL4   A0A1Y1MNI2   C3U0S3   A0A0S3J3E6   A0A2P8Z2V2   A0A310S3S4   A0A2P1ERN0   A0A0S3J2R4   A0A2I4PGZ5   A0A2I4PGZ6   A0A146KQN4   A0A1L2BLC1   A0A1W5LB37   A0A0H4CQN8   A0A146M152   A0A0A9XRD6   A0A067RFC5   A0A0K8SIJ0   A0A2J7RCL6   A0A2I4PH01   A0A2J7RCN5   K7IMB4   A0A1I9HZQ1   A0A067RF07   A0A1S4K2Y0   A0A0N9JVL5   A0A346TI36   A0A3G6VEY0   B0X4H5   A0A0C5DMP8   A0A023F6D2   G0YYB0   A0A0E3Y6N9   A0A310SA32   T1IC87   D2A0H5   E0W3E3   A0A1B6C183   A0A194PCR4   R4FK91   B0X4H6   A0A182PZG9  

Pubmed

26354079    25665775    18362917    19820115    17994087    15632085    + More
17550304    19364529    10731132    12537572    22936249    25348373    23517120    28648823    26626891    26999592    18057021    25315136    21504749    12537568    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17510324    28004739    29403074    26823975    25401762    24845553    20075255    24893337    26164593    30154418    30465940    25474469    25856077    20566863   

EMBL

KP729048    AKT26506.1    KP729047    AKT26505.1    GDQN01008420    JAT82634.1    + More
KQ461108    KPJ08983.1    KQ459605    KPI91875.1    KP296782    AJO62246.1    KQ971329    EFA01368.1    CH933809    KRG06260.1    CH379070    KRT08602.1    CP012525    ALC43387.1    CH940647    KRF84429.1    CH902618    KPU78340.1    CH963876    EDW77000.2    KYB28339.1    OUUW01000012    SPP86982.1    CM000159    KRK01388.1    KP743736    AKI29052.1    EU189152    AE014296    BT029278    BT029647    BT029648    BT029668    BT029968    BT029669    BT099997    ABL75707.1    ABW70129.1    ACZ94643.1    CM002912    KMY98206.1    BT132928    AEW12900.1    GAKP01007269    JAC51683.1    CH954178    KQS43295.1    GACR01000058    JAA74403.1    KRG06261.1    NNAY01000622    OXU27338.1    KT381539    ALR72545.1    KRT08600.1    GGOB01000134    MCH29530.1    MF385106    AWT23278.1    GDUN01000693    JAN95226.1    GFDL01005207    JAV29838.1    KRF84430.1    EDV40046.2    KPU78341.1    GALX01004540    JAB63926.1    KRF98558.1    SPP86984.1    HQ845072    AEK32389.1    KRK01387.1    AJWK01027567    AJWK01027568    AJWK01027569    KMY98205.1    BT133054    AEX93140.1    AGB94234.1    KQS43296.1    EU189151    FJ387159    CH477368    ABW70128.1    ACK99698.1    MF385182    AWT23353.1    GFDF01007354    JAV06730.1    KT381697    AMA98188.1    GFDF01007355    JAV06729.1    GEHC01000816    JAV46829.1    KT268311    ANQ46505.1    GFDL01005200    JAV29845.1    GEZM01026130    GEZM01026129    JAV87222.1    KT381538    ALR72544.1    PYGN01000221    PSN50836.1    GGOB01000133    MCH29529.1    KY849878    AVM18969.1    KT381537    ALR72543.1    KU523598    APZ81420.1    KU523599    APZ81421.1    GDHC01019808    JAP98820.1    KT282969    ALS03935.1    KT991367    ANA75033.1    KP684219    AKN78949.1    GDHC01005116    JAQ13513.1    GBHO01021075    GBHO01021073    JAG22529.1    JAG22531.1    KK852506    KDR22467.1    GBRD01012723    GBRD01012722    JAG53102.1    NEVH01005885    PNF38577.1    KU523600    APZ81422.1    PNF38579.1    KJ027554    AIX97076.1    KDR22466.1    KP963704    ALG36152.1    MH510334    AXU25119.1    MH178116    AZB52756.1    DS232341    EDS40328.1    KP296781    AJO62245.1    GBBI01001928    JAC16784.1    HQ845069    AEK32386.1    KM251638    AKC58519.1    GGOB01000132    MCH29528.1    ACPB03017884    CM000279    EFA02899.1    DS235882    EEB20149.1    GEDC01030032    GEDC01020997    JAS07266.1    JAS16301.1    KQ459606    KPI91086.1    GAHY01001963    JAA75547.1    EDS40329.1    AXCN02000212   

Proteomes

UP000053240    UP000053268    UP000007266    UP000009192    UP000001819    UP000092553    + More
UP000008792    UP000007801    UP000192221    UP000007798    UP000268350    UP000002282    UP000000803    UP000008711    UP000215335    UP000095300    UP000095301    UP000092461    UP000008820    UP000245037    UP000027135    UP000235965    UP000002358    UP000002320    UP000015103    UP000009046    UP000075886   

PRIDE

E1JI63    H0RNK6    C3U0S3    B0X4H5    D2A0H5   

Pfam

PF01130   CD36        + More
PF00062   Lys

Interpro

IPR002159   CD36_fam        + More
IPR001916   Glyco_hydro_22       
IPR019799   Glyco_hydro_22_CS       
IPR023346   Lysozyme-like_dom_sf       
IPR005428   CD36/SCARB1/SNMP1       

SUPFAM

SSF53955   SSF53955       

CDD

cd00119  LYZ1

ProteinModelPortal

A0A0K1DD11   A0A0K1DCZ0   A0A1E1W6Q1   A0A194QTX5   A0A194PL92   A0A0C5D1K3   + More
D6WGA2   A0A0Q9XLT1   A0A0R3P600   A0A0M4EY67   A0A0Q9WIA7   A0A0N8P0X5   A0A1W4VMN0   B4MY11   A0A139WK32   A0A3B0K2V3   A0A0R1DWB1   A0A0G2UMX4   E1JI63-2   A0A0J9RQQ6   H0RNK6   A0A034WD47   A0A0Q5U2G2   M3TYZ6   A0A0Q9XD94   A0A232FA70   A0A0S3J3G0   A0A0R3P663   A0A310S638   A0A2U9NK50   A0A0P6IZI1   A0A1Q3FQQ9   A0A0Q9WU97   B3M962   A0A1I8P8G9   V5I8K2   A0A1W4V9W1   A0A0Q9WYB0   A0A1I8MLR4   A0A3B0JY60   G0YYB3   A0A0R1DW87   A0A1B0CTG3   A0A0J9UGI3   H1UUH0   E1JI63   A0A0Q5UHH1   C3U0S3-2   A0A2U9NKV4   A0A1L8DK56   A0A0X8DC77   A0A1L8DJS2   A0A1W7R6N8   A0A1B1FKI5   A0A1Q3FQL4   A0A1Y1MNI2   C3U0S3   A0A0S3J3E6   A0A2P8Z2V2   A0A310S3S4   A0A2P1ERN0   A0A0S3J2R4   A0A2I4PGZ5   A0A2I4PGZ6   A0A146KQN4   A0A1L2BLC1   A0A1W5LB37   A0A0H4CQN8   A0A146M152   A0A0A9XRD6   A0A067RFC5   A0A0K8SIJ0   A0A2J7RCL6   A0A2I4PH01   A0A2J7RCN5   K7IMB4   A0A1I9HZQ1   A0A067RF07   A0A1S4K2Y0   A0A0N9JVL5   A0A346TI36   A0A3G6VEY0   B0X4H5   A0A0C5DMP8   A0A023F6D2   G0YYB0   A0A0E3Y6N9   A0A310SA32   T1IC87   D2A0H5   E0W3E3   A0A1B6C183   A0A194PCR4   R4FK91   B0X4H6   A0A182PZG9  

PDB

5LGD     E-value=1.94306e-33,     Score=357

KEGG

101742423    no KO assigned | (RefSeq) sensory neuron membrane protein 2

GO

GO:0016021   GO:0050896   GO:0007608   GO:0005886   GO:0016020   GO:0004559   GO:0005975   GO:0003824   GO:0006013   GO:0015923   GO:0030246   GO:0007169  

PANTHER

PTHR11923  

Subcellular location

Cell membrane  

Length:

508

Number of predicted TMHs:

2

Exp number of AAs in TMHs:

46.18603

Exp number, first 60 AAs:

23.15373

Total prob of N-in:

0.99344

POSSIBLE N-term signal

sequence

inside

1  -  6

TMhelix

7  -  29

outside

30  -  474

TMhelix

475  -  497

inside

498  -  508

 

 

Pi

18.167378

Theta

18.381143

Tajima's D

0.206112

CLR

0.110059

CSRT

0.434528273586321

Interpretation

Possibly Positive selection