Gene

KWMTBOMO00525

Pre Gene Modal

BGIBMGA012322

Annotation

PREDICTED:_nostrin_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr1(+):15296340-15372214      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.261

CDS

ATGAATCGGGAGAACGTCTCCACGAAGATAGCCGCCGGCATGGACCGGTGGCAGAACACTCTCGAAGATATGATCAACTTACGCTCCTCGCATAATCAAGTCTTCAAGGATAACTATTGGGCTCAGAATGGTTTTGATGAACTTCGTCGTTATGTGAAACAAGGAAGCGACTTCAGCAAGGAGCTAGCTTCAATATTACAAGAAAGAGTCGAGGCGGAAAATTATTATTCAAAATGCTTGGCCAAGCTCAGCACCAAACTAAGCAAAGCGTGCAAAGAAAGTGTCGGCTCCTGCGCGGAAGCATGGAAACATGTCGCCTTAGAAATGGAGAAACGTGCTGAAATACACAGAAATTACTCAAGTGGCCTATCGGATGAGCTAGTGAAACCAATGAAACACGTAATCGACAGTCAATTGAAACTTAGGAAGAAGATTGAAGGGAACGTGGATAAGACTACACGGACCTTATCCGATTGGCGAACTGCTGAAGCCAAGTCCAAGAAACAGTCTCACGCCGCTGCGAGAGAGAACGAGAAGTTGCAAGACGCCTCTCTAGAGTTTAGTCGCATTTCGCGCAGTTCAAGTGTGGGTCACATTCCGCATGCCCATTCGATTTTGACCGCGGCTAGAGCTGAACGCGTCACAACAACGTCAAATGAAAGAGACGCAGCTAAACTCCAAGTGAAGAAACGGAAGACAGAGGATGCTGTCAAGAAAACTGAAGTGGATTATTATAACGTTTGTGTTCAAGCTGAAAGAGCCAGATTGGAATGGGAAACCAGCGTTATGAAAGGAGCTGGTATGCTGGAGTCTCTTGAGGAAGAGAGACTTTCACAGCTGAAGACTGCAGCCGATTGCTACCTCAGATTAACTTCTGCAGTACCTTCCCAATTAGCTGAGGCCACGAACACACTGGTGAATCCGATTAAGAATGCAAACGCAAATGTTGACATGAGGGTCGTGCGTGGAGTGCGATCAGCCCCCGCAGGCGCGAGTGAACAACTCTTGCCTGATTTCTACTGTGAACACACGACCTTAGCTATGAATCGGGAACGACGCAAACAGGCCATTTTGAAAATCCTACAGCTTGTCAAACAAGATATCGACAGAGAGCGCAAGTCGAAACAAGGACTAGAAAAGCTATCGATGGCCATCAAACAAACACCGACATTCGGAAACGATGATTCGCAGCAAAATGTCGCAGATAAACTTTATCATATGAGAAGCATGCTAACGTATTTAGAAGCAATTAGGTACAAAATCACGGCGAGTCTAAACGAATTAGACAATAGAACCCCAGTGCAGCATCCTCTATCCACACACATACAAGTGGTCAGGGATAAGCAAGGCTTACAACAGAGCATACTGAAGGTACCACCGTGGTTGCAAACTGATTACCAGAACGAAGTAAATAAAAACCTCCAACCTAACTACTCCGCGCTAACTAAAAGCGTTAACGGAGGTGAAGAAAGAGAAAGGCGGGATTCGATAATGAGTAGAGCATCTAGCAAGTTAAGGATAGAACATCTTTCATTTAGAAGAAACACTGAGAACAAGAGTGCGCCGGCGACCCCCGTGATGACTCCTATAAGTGTCGATTTACCGACGCCGACGCTGCTGGACGGCAAGGCGCAGATGTTGGGGACCCCAGTCCCGCCTGAGAGTCCTTTAGATTGGAGCGAACGTGGTGCCGGTGACGGTCTTTCGAATCAACATGACAGTGATTTTGATGAGTTTTCGTCACAAAGTGACAGCTCCACTGACTTGACTGATATGATGAAGAATGAGAACGGGGATGGCGCATCGCAGACTCCTTCCTTGGGGAAATGCAGGGCATTATACACTTACGAAGCGAGACTGAATGATGAGCTCACGTTGTCTCCAGGAGACATAATAAATATCCACGAAAAACAGGATGACGGCTGGTGGTCTGGCGATCTCAACGGCTCCTACGGAATCTTCCCTTCTTCGTATGTCGAGGAAATCAACTCATGCATTTGA

Protein

MNRENVSTKIAAGMDRWQNTLEDMINLRSSHNQVFKDNYWAQNGFDELRRYVKQGSDFSKELASILQERVEAENYYSKCLAKLSTKLSKACKESVGSCAEAWKHVALEMEKRAEIHRNYSSGLSDELVKPMKHVIDSQLKLRKKIEGNVDKTTRTLSDWRTAEAKSKKQSHAAARENEKLQDASLEFSRISRSSSVGHIPHAHSILTAARAERVTTTSNERDAAKLQVKKRKTEDAVKKTEVDYYNVCVQAERARLEWETSVMKGAGMLESLEEERLSQLKTAADCYLRLTSAVPSQLAEATNTLVNPIKNANANVDMRVVRGVRSAPAGASEQLLPDFYCEHTTLAMNRERRKQAILKILQLVKQDIDRERKSKQGLEKLSMAIKQTPTFGNDDSQQNVADKLYHMRSMLTYLEAIRYKITASLNELDNRTPVQHPLSTHIQVVRDKQGLQQSILKVPPWLQTDYQNEVNKNLQPNYSALTKSVNGGEERERRDSIMSRASSKLRIEHLSFRRNTENKSAPATPVMTPISVDLPTPTLLDGKAQMLGTPVPPESPLDWSERGAGDGLSNQHDSDFDEFSSQSDSSTDLTDMMKNENGDGASQTPSLGKCRALYTYEARLNDELTLSPGDIINIHEKQDDGWWSGDLNGSYGIFPSSYVEEINSCI

Uniprot

H9JS12   A0A2A4JY68   A0A2A4JXH0   A0A2H1V3P9   A0A1E1W9U6   A0A194QTZ0   + More
A0A194PFQ9   A0A212EKI3   A0A0L7LLH0   U5ES56   A0A0A1X4U3   A0A182K4P5   A0A182NP94   A0A182YAA8   A0A182WE91   A0A182PN60   A0A182T3W3   A0A182U218   A0A182FVE4   B4L2X3   A0A0A1XM52   A0A0Q9WMK6   A0A0A1XSQ5   A0A182Q3Z6   A0A084VYY3   A0A336LYN4   A0A182UT55   A0A182RLV9   A0A182KUY1   Q7QE34   A0A0Q9WMU8   A0A1S4FAN0   A0A0Q9WW32   Q179Y6   B4NPX5   A0A2J7QVG8   A0A182WY07   W8BAK6   W8AMV8   B4PZZ0  

Pubmed

19121390    26354079    22118469    26227816    25830018    25244985    + More
17994087    24438588    20966253    12364791    17510324    24495485    17550304   

EMBL

BABH01017042    BABH01017043    NWSH01000394    PCG76716.1    PCG76715.1    ODYU01000541    + More
SOQ35470.1    GDQN01007339    JAT83715.1    KQ461108    KPJ08998.1    KQ459605    KPI91863.1    AGBW02014274    OWR41994.1    JTDY01000665    KOB76292.1    GANO01003404    JAB56467.1    GBXI01008145    JAD06147.1    CH933810    EDW06940.2    GBXI01002206    JAD12086.1    KRF93880.1    GBXI01000236    JAD14056.1    AXCN02001814    ATLV01018573    KE525238    KFB43177.1    UFQS01000043    UFQT01000043    SSW98392.1    SSX18778.1    AAAB01008848    EAA06999.4    KRF93879.1    KRF93878.1    CH477343    EAT43049.1    CH964291    EDW86200.2    NEVH01010475    PNF32578.1    GAMC01016434    JAB90121.1    GAMC01016435    JAB90120.1    CM000162    EDX02196.2    KRK06621.1   

Proteomes

UP000005204    UP000218220    UP000053240    UP000053268    UP000007151    UP000037510    + More
UP000075881    UP000075884    UP000076408    UP000075920    UP000075885    UP000075901    UP000075902    UP000069272    UP000009192    UP000075886    UP000030765    UP000075903    UP000075900    UP000075882    UP000007062    UP000008820    UP000007798    UP000235965    UP000076407    UP000002282   

PRIDE

H9JS12   

Pfam

PF00611   FCH        + More
PF14604   SH3_9
PF00018   SH3_1

Interpro

IPR027267   AH/BAR_dom_sf        + More
IPR001060   FCH_dom       
IPR001452   SH3_domain       
IPR031160   F_BAR       
IPR035656   Nostrin_SH3       
IPR036028   SH3-like_dom_sf       

SUPFAM

SSF103657   SSF103657        + More
SSF50044   SSF50044       

Gene 3D

1.20.1270.60    

CDD

cd11823  SH3_Nostrin

ProteinModelPortal

H9JS12   A0A2A4JY68   A0A2A4JXH0   A0A2H1V3P9   A0A1E1W9U6   A0A194QTZ0   + More
A0A194PFQ9   A0A212EKI3   A0A0L7LLH0   U5ES56   A0A0A1X4U3   A0A182K4P5   A0A182NP94   A0A182YAA8   A0A182WE91   A0A182PN60   A0A182T3W3   A0A182U218   A0A182FVE4   B4L2X3   A0A0A1XM52   A0A0Q9WMK6   A0A0A1XSQ5   A0A182Q3Z6   A0A084VYY3   A0A336LYN4   A0A182UT55   A0A182RLV9   A0A182KUY1   Q7QE34   A0A0Q9WMU8   A0A1S4FAN0   A0A0Q9WW32   Q179Y6   B4NPX5   A0A2J7QVG8   A0A182WY07   W8BAK6   W8AMV8   B4PZZ0  

PDB

2YUN     E-value=1.60163e-13,     Score=187

KEGG

101745785    K20126 nostrin | (RefSeq) nostrin

GO

GO:0097320   GO:0035317   GO:0008289   GO:0030708   GO:1903391   GO:0005768   GO:0005515   GO:0008270   GO:0043565   GO:0005524   GO:0005488   GO:0003677   GO:0003707   GO:0007169   GO:0016021  

Length:

666

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00138

outside

1  -  666

 

 

Pi

23.341531

Theta

21.27261

Tajima's D

0.282877

CLR

0.029952

CSRT

0.454177291135443

Interpretation

Uncertain