SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00524
Pre Gene Modal
BGIBMGA012272
Annotation
PREDICTED:_uncharacterized_protein_LOC106130482_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 4.408
 

Sequence

CDS
ATGCTAGCTGTAGCTAAGAGTTCACGGTTCGGCACTTTTCTTGAATTGGCTTTACTTCTCGCCTACGACACTTCCGATAATTGTATAGAAATGATGAAGGATAATATAATAGAGAACGTGTTTTATAGGTTCAATCCCTATTTCCCTGATAGACAGTTGCCTGTTTATGATATAAATCCAGCAGAGCCTGTGAGAGACTGCACCGTTAAATTGGGCGATAGCAGTATACATTTATCAAAAACTCTCTCATTACTTCTTCTCTTATTGAAAACCACTATACGGCAGATGGAAGAGATTTCTAATTTAAAAGCGTCGCTTCCCTGTCCCAATAATTATGCACAAAGTTGTTTCATCTGGTCTTATCGATTCGTGTGCCGGGCGAAGGAGCATCGACACGAAAGGATCACAATGACTGTTTTAGCAACTGCTTTACTGCACTGCTTCGGCGATCGGATGCAAACATTTTCCAATCACCTTATGCCGGATGTAATGTCTATGTCGGTTATGTCGGAAATACCACCGAGAAAAGATTGGACCGCCACCGTAAATATGAACACTTCACAAATAGATGTACATTTCAAGAAGACGTTGATATATTTAAGTGTTGCACACCTCAAAATATTCAGTTATCATAGATTCCTCGTAGAAGATCGACACTGGTTGATCGGTTTGATGTATCTGCTGGATCCCGGACTCTGTGCCCTGAGAGCCAATTGGTCCGCCCCCTTGTTCGCTGAACTACGTAAAGCTGCGTTACAAGCCTTAGTCTGTTCTATGTCTGCAATACCGACGGTTTTAGTGGCTGAATGTACTTTAATACATCGGATAATGTGGTATATCGAATGGTATTCAGAAAGTCCATATGATCTCTCCACACTGTACTGGTGTGTAAGGCTCTTACAAGTCGCAACCCACAACCGGCGGAAGGACAAGAAAGCAAGAGAGATATCCCTTCGTGAACTCTTCGAAACCCACGGCATCATTATACTTATACGTCTGTGCTACAGCCTTCTAGAGCAAAGGCAACCTCCGATAGAAAAGAGTCAAGTTATAATATCCGTTTGTCTACGGTTACTGACGAGCGCCGTCGAAGTCGAGGGTAGAGTGAGCTGCTGTGTTTATCCCACGATCAAATGGCCCAGTTCAACTAACACTGTGGCTGAGAGATTGCTCGACGTGGTTCTGCATTCTTTGAACAAACATTTAATCGTCAGTGATAGATTACTAATATCACTCTTAAACTTCATATGGGAATCTATAATATGGAGGCAAGAGTATCGCAGGAGCTTCGTGGCCAAAGACGGCATTTACAAGTTGCTGGATATTATTACTATGACGCGTGCTCCGGTCCAGTGCATTGCGTTAGCGGTAATCTGTGACGTGGCTTGCGCAGGCGAAGCCGTCGGTCAGCTGGTGTCTTGGCGAGCCAATCTCGGTGCTTCTAAGACTGTAAGAAATACTATATAA
Protein
MLAVAKSSRFGTFLELALLLAYDTSDNCIEMMKDNIIENVFYRFNPYFPDRQLPVYDINPAEPVRDCTVKLGDSSIHLSKTLSLLLLLLKTTIRQMEEISNLKASLPCPNNYAQSCFIWSYRFVCRAKEHRHERITMTVLATALLHCFGDRMQTFSNHLMPDVMSMSVMSEIPPRKDWTATVNMNTSQIDVHFKKTLIYLSVAHLKIFSYHRFLVEDRHWLIGLMYLLDPGLCALRANWSAPLFAELRKAALQALVCSMSAIPTVLVAECTLIHRIMWYIEWYSESPYDLSTLYWCVRLLQVATHNRRKDKKAREISLRELFETHGIIILIRLCYSLLEQRQPPIEKSQVIISVCLRLLTSAVEVEGRVSCCVYPTIKWPSSTNTVAERLLDVVLHSLNKHLIVSDRLLISLLNFIWESIIWRQEYRRSFVAKDGIYKLLDIITMTRAPVQCIALAVICDVACAGEAVGQLVSWRANLGASKTVRNTI

Summary

Ontologies

GO

Topology

Length:
488
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.28112
Exp number, first 60 AAs:
0.02082
Total prob of N-in:
0.01327
outside
1  -  488
 
 

Population Genetic Test Statistics

Pi
29.977987
Theta
29.311903
Tajima's D
0.101909
CLR
0.059264
CSRT
0.394430278486076
Interpretation
Uncertain
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