Gene

KWMTBOMO00508

Pre Gene Modal

BGIBMGA012288

Annotation

PREDICTED:_probable_cationic_amino_acid_transporter_[Amyelois_transitella]

Location

Bomo_Chr1(-):14468754-14569761      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.969

CDS

ATGCAGCGCGTAATGCAGCGTATCCAGCAAGTAGACTGGAAGGCCGTCCGTCGCGACGGTCATAACATCTTCACCAAGCTCATCAGGACGAAGGACCCGTTGGAGGCAGAGGCCAACCAAGAACTGGCTGTGCCGGGGAGACATCGTTTATCGCGTTGTTTAACCACTACGGATCTGACGTCCTTGGGCGTGGGCTCCTGTGTTGGCACCGGGATGTATCTCGTTGCTGGCATGGTGGCCCGCAAGTTCGCAGGCCCTGGCGTTATGATAAGCTTTATCATAGCGGCCATAGCCAGTATCTTTTCGGGTGCATGCTACGCCGAGTTCGGCGTCCGTGTCCCGAATACCACTGGATCGGCTTATACCTACTCATACGTCACCGTTGGAGAGTTCATCGCCTTCATTATTGGTTGGAACATGGTGCTCGAGTACCTGATCGGGACTAGTGCCTGCGCCAGGGCTCTGAGTGCGTGTTTCGACTCTCTCTTCAACGGAGCTATTTCCCACCATCTCGCTCTCAACATCGGAACTATCTTTGGCAAGCCCCCGGACTTCATCGCTTTCGCCATTACTCTTTTGATGATGCTCGTCCTGATCGCTGGCGTGAGGAAATCGCTGATGTTCAACAACATCCTAAACTCCATCAACCTCATAGTTTGGGTGTTCATCATGGGCTCCGGTCTCTTCTACGCCGACTTCAGCAACTGGACTGATCATAAGGGTTTTCTTCCGTACGGATGGAACGGGGTGTTCAGCGGCGCCGCTACTTGCTTCTACGCTTTCATCGGGTTCGATATCATTGCTACCACCGGAGAAGAGGCCAACAACCCTAAGCGTTCCATCCCTCTGGCTATAGTGCTGAGTCTGGGCATCATCCTACTGGCTTATGTTAGCACTTCCATGATGCTGACTCTGATAGTTCCCTACGACCAAATAGACACCGACTCGGCCTTGGTACAAATGTTCGCCCGCGCCGGCGCCCCCATCTGCAAGTACATCGTTGCGATTGGTGCTCTCGCTGGCCTCACCGTGTCCATGTTTGGTTCCATGTTCCCGATGCCAAGGATCATCTATGCAATGGCGCAAGACGGACTAATCTTCAAGTCACTGGCGTCGATTTCGGAGACATCCGGGACTCCAGCCCTCGCTACCATCCTAGGAGGTTTCGCTGCCGCAATGGTAGCCCTGACTATCCAGCTGGAGGTGCTCGTTGAAATGATGAGCATCGTTTCTGCAGCTATGTCAAACTCAAAAACAACTCAAACAACAGCAGTCGAGATGCTCTGGAACGAAACATCCAGAACAGACGCTAGTTAG

Protein

MQRVMQRIQQVDWKAVRRDGHNIFTKLIRTKDPLEAEANQELAVPGRHRLSRCLTTTDLTSLGVGSCVGTGMYLVAGMVARKFAGPGVMISFIIAAIASIFSGACYAEFGVRVPNTTGSAYTYSYVTVGEFIAFIIGWNMVLEYLIGTSACARALSACFDSLFNGAISHHLALNIGTIFGKPPDFIAFAITLLMMLVLIAGVRKSLMFNNILNSINLIVWVFIMGSGLFYADFSNWTDHKGFLPYGWNGVFSGAATCFYAFIGFDIIATTGEEANNPKRSIPLAIVLSLGIILLAYVSTSMMLTLIVPYDQIDTDSALVQMFARAGAPICKYIVAIGALAGLTVSMFGSMFPMPRIIYAMAQDGLIFKSLASISETSGTPALATILGGFAAAMVALTIQLEVLVEMMSIVSAAMSNSKTTQTTAVEMLWNETSRTDAS

Uniprot

A0A212EID0   A0A194QZJ9   A0A194PGK3   A0A195FVI2   A0A195DCR8   A0A232EHE3   + More
A0A151X4L8   K7IMD9   A0A195BCE8   A0A158NS32   A0A087ZQV8   E2AYK4   A0A2J7RR55   D6WJP6   A0A151IL35   A0A026W979   A0A0C9QGS6   A0A067RNH5   A0A154PAI5   T1IVD4   A0A2A3E3S9   A0A1W4WGI8   N6TKK8   A0A0R3NZF1   A0A084W0L1   A0A182NQN5   Q16PF2   A0A182HKF4   A0A182J0S5   A0A182QIV3   A0A0A1WNX4   A0A182L8N8   A0A182X9H0   Q7PUC7   B4H4Q1   A0A182VND0   A0A226ELU3   A0A182VVX1   G7H832   A0A182PRR9   A0A1J1J420   A0A1I8M5B6   A0A0Q9XG06   A0A1I8P3R8   B3MQM8   Q29HX8   B4I7B1   A0A1B0CEC9   A0A1W4VHJ8   Q9VWD3   A0A3B0KJP4   B3NVT3   A0A0Q5T6Y3   B4PZ08   M9PHM0   B0W2E1   A0A0R1EB45   W8BK65   B4NQ70   B4MAR7   B4L804   A0A0M5J3B6   A0A165RBA4   A0A2H8TZS3   B4JJI0   A0A2R5L4A6   J9KAK6   A0A2S2PER9   A0A1Y1KQG9   A0A182RA48   A0A182FSA7   E0VXE5   A0A1A9ZQI7   A0A1B0FI77   L7M0D3   A0A1A9USW9   A0A1B0C7E0   T1I6V8   A0A0L7R0X5   T1KX13   A0A1A9XCV1   A0A1S3IBV3   A0A3P8S2D7   A0A3B5APM9   A0A1Y1KVD8   W5KFW3   A0A2D0PW17   A0A310TMS3   H3CMF8   A0A3B4CU92   A0A1L8GAM3   A0A3B1JR23   Q4STY8   A0A3L8DB57   A0A3N0YEI9   W5MKB5   A0A2K5DW10   A0A0S7HYA8  

Pubmed

22118469    26354079    28648823    20075255    21347285    20798317    + More
18362917    19820115    24508170    24845553    23537049    15632085    17994087    24438588    17510324    25830018    20966253    12364791    14747013    17210077    25315136    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    17550304    24495485    18057021    28004739    20566863    25576852    25329095    15496914    27762356    30249741   

EMBL

AGBW02014676    OWR41234.1    KQ461108    KPJ09021.1    KQ459605    KPI91839.1    + More
KQ981208    KYN44650.1    KQ980989    KYN10705.1    NNAY01004518    OXU17780.1    KQ982544    KYQ55352.1    KQ976528    KYM81870.1    ADTU01024436    ADTU01024437    ADTU01024438    ADTU01024439    GL443918    EFN61492.1    NEVH01000611    PNF43297.1    KQ971343    EFA04475.1    KQ977142    KYN05322.1    KK107374    EZA51589.1    GBYB01013773    GBYB01013774    JAG83540.1    JAG83541.1    KK852521    KDR22125.1    KQ434857    KZC08862.1    JH431581    KZ288439    PBC25741.1    APGK01034130    APGK01034131    KB740904    KB632006    ENN78458.1    ERL87969.1    CH379064    KRT06408.1    ATLV01019122    KE525262    KFB43755.1    CH477784    EAT36248.1    APCN01000826    AXCN02001509    GBXI01014164    GBXI01005267    JAD00128.1    JAD09025.1    AAAB01008987    EAA01745.5    CH479209    EDW32663.1    LNIX01000003    OXA58117.1    BT132755    AET07638.1    CVRI01000070    CRL07152.1    CH933814    KRG07456.1    CH902621    EDV44654.1    EAL31629.2    CH480823    EDW56209.1    AJWK01008736    AE014298    AAF49012.2    OUUW01000011    SPP86709.1    CH954180    EDV46748.1    KQS30104.1    CM000162    EDX02086.1    AGB95568.1    DS231826    EDS28687.1    KRK06557.1    GAMC01007438    JAB99117.1    CH964291    EDW86295.1    CH940655    EDW66326.2    EDW05579.1    KRG07454.1    KRG07455.1    KRG07457.1    CP012528    ALC49561.1    KR028430    AML23856.1    GFXV01007962    MBW19767.1    CH916370    EDV99732.1    GGLE01000202    MBY04328.1    ABLF02029856    ABLF02029858    ABLF02029859    ABLF02029860    GGMR01015330    MBY27949.1    GEZM01076756    GEZM01076753    JAV63669.1    DS235830    EEB18051.1    CCAG010004711    GACK01008466    JAA56568.1    JXJN01028274    JXJN01028275    ACPB03000878    KQ414670    KOC64446.1    CAEY01000675    GEZM01076751    JAV63675.1    KV467268    OCT56514.1    CM004474    OCT80776.1    CAAE01014066    CAF95894.1    QOIP01000010    RLU17730.1    RJVU01044706    ROL44665.1    AHAT01015260    AHAT01015261    GBYX01435555    JAO45780.1   

Proteomes

UP000007151    UP000053240    UP000053268    UP000078541    UP000078492    UP000215335    + More
UP000075809    UP000002358    UP000078540    UP000005205    UP000005203    UP000000311    UP000235965    UP000007266    UP000078542    UP000053097    UP000027135    UP000076502    UP000242457    UP000192223    UP000019118    UP000030742    UP000001819    UP000030765    UP000075884    UP000008820    UP000075840    UP000075880    UP000075886    UP000075882    UP000076407    UP000007062    UP000008744    UP000075903    UP000198287    UP000075920    UP000075885    UP000183832    UP000095301    UP000009192    UP000095300    UP000007801    UP000001292    UP000092461    UP000192221    UP000000803    UP000268350    UP000008711    UP000002282    UP000002320    UP000007798    UP000008792    UP000092553    UP000001070    UP000007819    UP000075900    UP000069272    UP000009046    UP000092445    UP000092444    UP000078200    UP000092460    UP000015103    UP000053825    UP000015104    UP000092443    UP000085678    UP000265080    UP000261400    UP000018467    UP000221080    UP000007303    UP000261440    UP000186698    UP000279307    UP000018468    UP000233020   

PRIDE

G7H832    Q9VWD3    M9PHM0   

Pfam

PF13906   AA_permease_C        + More
PF13520   AA_permease_2
PF17906   HTH_48

Interpro

IPR029485   CAT_C        + More
IPR002293   AA/rel_permease1       
IPR041426   Mos1_HTH       

ProteinModelPortal

A0A212EID0   A0A194QZJ9   A0A194PGK3   A0A195FVI2   A0A195DCR8   A0A232EHE3   + More
A0A151X4L8   K7IMD9   A0A195BCE8   A0A158NS32   A0A087ZQV8   E2AYK4   A0A2J7RR55   D6WJP6   A0A151IL35   A0A026W979   A0A0C9QGS6   A0A067RNH5   A0A154PAI5   T1IVD4   A0A2A3E3S9   A0A1W4WGI8   N6TKK8   A0A0R3NZF1   A0A084W0L1   A0A182NQN5   Q16PF2   A0A182HKF4   A0A182J0S5   A0A182QIV3   A0A0A1WNX4   A0A182L8N8   A0A182X9H0   Q7PUC7   B4H4Q1   A0A182VND0   A0A226ELU3   A0A182VVX1   G7H832   A0A182PRR9   A0A1J1J420   A0A1I8M5B6   A0A0Q9XG06   A0A1I8P3R8   B3MQM8   Q29HX8   B4I7B1   A0A1B0CEC9   A0A1W4VHJ8   Q9VWD3   A0A3B0KJP4   B3NVT3   A0A0Q5T6Y3   B4PZ08   M9PHM0   B0W2E1   A0A0R1EB45   W8BK65   B4NQ70   B4MAR7   B4L804   A0A0M5J3B6   A0A165RBA4   A0A2H8TZS3   B4JJI0   A0A2R5L4A6   J9KAK6   A0A2S2PER9   A0A1Y1KQG9   A0A182RA48   A0A182FSA7   E0VXE5   A0A1A9ZQI7   A0A1B0FI77   L7M0D3   A0A1A9USW9   A0A1B0C7E0   T1I6V8   A0A0L7R0X5   T1KX13   A0A1A9XCV1   A0A1S3IBV3   A0A3P8S2D7   A0A3B5APM9   A0A1Y1KVD8   W5KFW3   A0A2D0PW17   A0A310TMS3   H3CMF8   A0A3B4CU92   A0A1L8GAM3   A0A3B1JR23   Q4STY8   A0A3L8DB57   A0A3N0YEI9   W5MKB5   A0A2K5DW10   A0A0S7HYA8  

PDB

6F34     E-value=1.23262e-51,     Score=514

KEGG

101740985    K13871 solute carrier family 7 (cationic amino acid transporter), member 14 | (RefSeq) cationic amin

GO

GO:0022857   GO:0016021   GO:0003333   GO:0015171   GO:0001654   GO:0016020   GO:0003676   GO:0004634   GO:0006096   GO:0005488   GO:0003677   GO:0003707   GO:0007169   GO:0055085  

Length:

438

Number of predicted TMHs:

8

Exp number of AAs in TMHs:

195.87955

Exp number, first 60 AAs:

1.70951

Total prob of N-in:

0.98882

inside

1  -  58

TMhelix

59  -  81

outside

82  -  84

TMhelix

85  -  107

inside

108  -  119

TMhelix

120  -  142

outside

143  -  184

TMhelix

185  -  202

inside

203  -  208

TMhelix

209  -  231

outside

232  -  240

TMhelix

241  -  263

inside

264  -  282

TMhelix

283  -  305

outside

306  -  324

TMhelix

325  -  347

inside

348  -  438

 

 

Pi

19.324333

Theta

20.428148

Tajima's D

-1.369282

CLR

0.033222

CSRT

0.0735463226838658

Interpretation

Uncertain