SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00496  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA012308
Annotation
PREDICTED:_mucin-5AC-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 2.579
 

Sequence

CDS
ATGTTTACTGCCGGCACAGAACAAAAACAGCATTCCAGAATCCAAATTAAGAAGGGGCCTAACGGGCAAGACTATGAATACGAATACGTTTATTATTACTATGATGAAGAGGATGAAGTCAAAAAAGAGGGAAAAAACAAAGACAAGGACTCTACCACTTCCGAGCCTCTAGTTCACAATTCTCATGACGGTCCGCTTAAATCCGACACAGACAACCACATCGGAAATGAAAGTAAAACAAAATACACAACGGTAGATAGGTCTCGAACAACAACCACTACGGCAGCTCCAGAGACACAAAACGAAGTCCTGCCGCCGTCAACCAGAGGTCGCGGACGTGGTCGAAACATAGCTCCTCCACCAGTCGAGGAAGAAGTTGAAGAAGACAATACTAGGTTCCCCTCGAGCACACGGTTCCCTCCTCGTGGTCGCAACTTGGCATCAGCTACTAGCACTACTACTTATGTACCGGAAGTTTCTTCGGAAACTGTGAGGCAGCGCGGTCGTCAATCAGACAGTGTAGCTGATGAGTCCATTGGTCAGACCAGAAGCAGGACCCGTGCGCACATCAGGCGCCCAAGTTCAGAGTTGGTCGACCTCGACAGCTTCAAAACGAACTCTGGTGACATCCCACTTCAATACAAAGAGCCCCCGACGAGGTATTCTTCCGAGAGCAAAACAACTACCGAAGAAATTCCCGCAGCCGAGACCAGTGACGAAGAATCTGCTAATCACAAGGAGCCCACCAGAGAAGGTCACAGCTTGTTAAGTGGAATAAAATTCGAGGAGATTGTAGATGATTCGAAGCTGCCCGCAGACTACAAGCTGACTACGACGTTCGAGCAGGAAACAACTGAGTACACCACCATGACGGCGATGGAAAAGGTCGCTCTCGATCTATACGCGTACTTGGCGGGCGAGAACTTAAACAACGAGGTCAACCCGACCAGCGGTGACCTGATCAACTTCGACGGCACCACAACTGTTGACGATGAAGCTGCGACCACCGAGGAGCTGAGTACCACTGAAGAGGCTACAACATCGACAACTACTACCACCACGACCACCACAACCACTACCACCACCACTCCGGCTCCGACTACAACCACCACGACCACTACGGCTGCTCCGTCTACTCGGCCCTCAAGGTTCAAGGGACGCGCCGGAGCTAGGTCTCGTGTTTCCACCGTTTCTACCGCCGCTACCGAAGCTCCAGCTGAAACCTCCACAAGAACTAGAGGTCGATTCAGTAAGCCTGGCGTGGGTCGTCGGACTTCTGCTGCCGTTCCCGAAGGTACAACAGTTGCACCCGCCGCCGCCGCTGACAAGCCCACTACGAAGGCATTCGGTCGTCGTGGTTTGTTCGCAAGCCGCACTCGTCCCAGTTTCACTACAGCTGCCCCAGCGTCTGATGATGGAAGCGTAGCATCGGAAGCCAACGCTGACACTCCAGCACCAAGCAGGCCTCGTCTACGTCCCGGTCTCAGAAGGACCTCAACCACTACAACGACAGCCGCCAGTGCAGCATCGTCTGAAGACAACACCGGCGCTACCTCTGGAGAAGTCGTGGAAACTACTCCCACCCCAGGAAGGACCCTAGGTCGTGGACGTCCTGGCCTTCGACCGGCTTCTCTCCGTCCAGGCCCAAGGCTTAACCTGAGGCCTAACCCTAGACTCCGCCCCGGAGTTGCCACTCCCGCGCCTGCTGAAACCGCTTCCGAAGTGCCTGCAGAGACAGCTGCTCCTGAATCACCTGTAACTGAAGCGGATTCCGAAAGCTCATCTCCGACAACTGCTCCGGAAGCACCTCGAGGTGGAGTTAGACTGCGCAATCGTCTTCAGGTGTCCCCGTCGCCTAAGCCCAGGGTTGTGGTGACACCTCCAGCGCGTAGGCCGAACCCACTACTTAAGAGGAAGCTTGCTTCTCCCTCAACAGAGGCTACAACCGAAGCACCTAAAAAATCAACGGAAACTACCGAGGAAAGCACCAGCGCTGAGAAAAGTGAGACGGAAACGGAACCTCAGCCCGCAGAAACTACACCGGCTCCTCCACTCCGTGGTCTGGACGCTCTCATCGCGAGGAGACGAGCCGCCGGCGGTATAGGAGGTCGACCAGCCCGGCCCGCGCGAGGAGCTTTCTACCACCCCAAATAA
Protein
MFTAGTEQKQHSRIQIKKGPNGQDYEYEYVYYYYDEEDEVKKEGKNKDKDSTTSEPLVHNSHDGPLKSDTDNHIGNESKTKYTTVDRSRTTTTTAAPETQNEVLPPSTRGRGRGRNIAPPPVEEEVEEDNTRFPSSTRFPPRGRNLASATSTTTYVPEVSSETVRQRGRQSDSVADESIGQTRSRTRAHIRRPSSELVDLDSFKTNSGDIPLQYKEPPTRYSSESKTTTEEIPAAETSDEESANHKEPTREGHSLLSGIKFEEIVDDSKLPADYKLTTTFEQETTEYTTMTAMEKVALDLYAYLAGENLNNEVNPTSGDLINFDGTTTVDDEAATTEELSTTEEATTSTTTTTTTTTTTTTTTPAPTTTTTTTTAAPSTRPSRFKGRAGARSRVSTVSTAATEAPAETSTRTRGRFSKPGVGRRTSAAVPEGTTVAPAAAADKPTTKAFGRRGLFASRTRPSFTTAAPASDDGSVASEANADTPAPSRPRLRPGLRRTSTTTTTAASAASSEDNTGATSGEVVETTPTPGRTLGRGRPGLRPASLRPGPRLNLRPNPRLRPGVATPAPAETASEVPAETAAPESPVTEADSESSSPTTAPEAPRGGVRLRNRLQVSPSPKPRVVVTPPARRPNPLLKRKLASPSTEATTEAPKKSTETTEESTSAEKSETETEPQPAETTPAPPLRGLDALIARRRAAGGIGGRPARPARGAFYHPK

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
717
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00032
outside
1  -  717
 
 

Population Genetic Test Statistics

Pi
25.574291
Theta
25.944531
Tajima's D
-1.113275
CLR
0.007655
CSRT
0.115544222788861
Interpretation
Uncertain
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