SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00494
Pre Gene Modal
BGIBMGA002243
Annotation
PREDICTED:_dephospho-CoA_kinase_[Papilio_xuthus]
Location in the cell
PlasmaMembrane   Reliability : 2.484
 

Sequence

CDS
ATGCAGTTAGTTCACGTGTTTGTGAATGTAAGGCAAGAAAGAAATATGTTCATTGTTGGACTGACTGGTGGCCTCGCAACAGGCAAGAGCACAGTGCTCTCCATATTTAAAGAACACGGAATTGCCGTAATAGATGCCGATGAAGTTGCTCGAAAAGTTTTAGAACCTGGCACAAAAGCTTGGCTTGAGGTTAAGCAGTATTTTGGACATGGAGTTCTGTTCCCTGATGGAAGAGTTAACAGATTAAAACTTGGCGAAATTGTTTTTGATGATATAGAAAAACGACGTAAACTTAATGCTATCACACATCCAAGGATACAAAGCGCAATGATAAGAATTGCATTTTCATTCTTTTTCACTGGTCATACTTATATTGTGATGGAAGTACCTCTCCTTTTTGAAACAGGAAAATTATTGACATTCATGCATAAAATTATTACTGTTGTTTGTGAGGATCACCAGCAGCTTGAACGTTTATACAAAAGGAATGACTTCTCTGAAATAGTAGCCAGAAAGAGAATTAATAGTCAAATGCCACTTCATGAAAAGGTTGCCAAATCACACTTTGTTATTGATAATTCTGGTGATCTTACAAACACCAGGAATCAGACAGAGAGTATTATTAAAGTCTTAAGAAAATCAAAGTTTACTTGGTACTTCAGAGCAATATTTATGATAACAATACTGTCAGCAGTTTTTGCTGTTACACATATTACAAGCAATTATCTTGAAAATTTATAA
Protein
MQLVHVFVNVRQERNMFIVGLTGGLATGKSTVLSIFKEHGIAVIDADEVARKVLEPGTKAWLEVKQYFGHGVLFPDGRVNRLKLGEIVFDDIEKRRKLNAITHPRIQSAMIRIAFSFFFTGHTYIVMEVPLLFETGKLLTFMHKIITVVCEDHQQLERLYKRNDFSEIVARKRINSQMPLHEKVAKSHFVIDNSGDLTNTRNQTESIIKVLRKSKFTWYFRAIFMITILSAVFAVTHITSNYLENL

Summary

EMBL
BABH01020862    ODYU01001491    SOQ37771.1    GAIX01012343    JAA80217.1    KQ461108    + More
KPJ09011.1    AGBW02014676    OWR41224.1    NWSH01004009    PCG65576.1    KQ459605    KPI91850.1    PYGN01001573    PSN33962.1    NEVH01014835    PNF27564.1    KK853191    KDR10023.1    UFQS01000590    UFQT01000590    SSX05172.1    SSX25533.1    JXUM01005321    JXUM01005322    JXUM01108788    JXUM01108789    KQ565264    KQ560191    KXJ71162.1    KXJ83901.1    GEDC01026663    GEDC01006771    GEDC01001291    JAS10635.1    JAS30527.1    JAS36007.1    KQ977294    KYN03909.1    KZ288311    PBC28469.1    GL768630    EFZ11119.1    KQ982805    KYQ50469.1    AJVK01022730    KK854175    PTY12599.1    KQ979182    KYN22337.1    GFDF01002277    JAV11807.1    CH478020    EAT34348.1    GL450531    EFN80829.1    KQ981693    KYN37777.1    KQ434772    KZC03903.1    GECZ01014245    JAS55524.1    ADTU01018855    KQ976692    KYM77866.1    CP012526    ALC46655.1    KQ414601    KOC69701.1    GFDL01000787    JAV34258.1    GL436457    EFN71949.1    GEDV01009626    JAP78931.1    KQ759843    OAD62605.1    AJWK01004116    NEDP02076731    OWF35365.1    GEFH01002647    JAP65934.1    GANO01000454    JAB59417.1    AY094946    AAM11299.1    KQ435881    KOX69837.1    GAMD01002376    JAA99214.1    CH940650    EDW68162.1    CH933806    EDW14884.1    GDIP01244763    JAI78638.1    CH916369    EDV92870.1    GGFJ01008951    MBW58092.1    GACK01002543    JAA62491.1    GACK01003897    JAA61137.1    CM000070    EAL29207.2    GGFM01004904    MBW25655.1    CH479185    EDW38573.1    CM000364    EDX11936.1    AE014297    BT128902    AAF54069.1    AEO51075.1    GGFK01009931    MBW43252.1    CH480821    EDW55177.1    CM000160    EDW96421.1    CH902617    EDV41786.1    OUUW01000008    SPP84175.1    CH954181    EDV48097.1    AAAB01008898    EAA09265.3    APCN01005809    ADMH02000180    ETN67474.1    JO844149    AEO35766.1    GBBM01005415    JAC30003.1    JRES01001097    KNC25547.1    GL888406    EGI61456.1    AXCN02001559    GDHF01013405    JAI38909.1    GDHF01023750    JAI28564.1    JH432100    GFWV01004366    MAA29096.1    CH964272    EDW85194.1    GAKP01001097    JAC57855.1    GEFM01004751    JAP71045.1    GANP01005217    JAB79251.1    GBXI01005547    JAD08745.1    GBHO01016935    GDHC01018319    JAG26669.1    JAQ00310.1    KK115375    KFM64958.1    ATLV01025001    ATLV01025002    ATLV01025003    ATLV01025004    KE525367    KFB52049.1    LNIX01000009    OXA49972.1    GBRD01008711    JAG57110.1    GBGD01002768    JAC86121.1    GGLE01004833    MBY08959.1    MWRG01001338    PRD34370.1   
Pfam
PF01121   CoaE
Interpro
IPR027417   P-loop_NTPase        + More
IPR001977   Depp_CoAkinase       
SUPFAM
SSF52540   SSF52540       
PDB
2IF2     E-value=4.70223e-24,     Score=273

Ontologies

Topology

Length:
246
Number of predicted TMHs:
2
Exp number of AAs in TMHs:
46.02174
Exp number, first 60 AAs:
4.75003
Total prob of N-in:
0.33429
outside
1  -  110
TMhelix
111  -  133
inside
134  -  217
TMhelix
218  -  240
outside
241  -  246
 
 

Population Genetic Test Statistics

Pi
14.830714
Theta
13.282852
Tajima's D
0.344656
CLR
0
CSRT
0.47997600119994
Interpretation
Uncertain
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