Gene
KWMTBOMO00490
Pre Gene Modal
BGIBMGA012306
Annotation
PREDICTED:_fibrinogen_alpha_chain_[Papilio_xuthus]
Location in the cell
Nuclear Reliability : 2.312
Sequence
CDS
ATGAATTCAGAATTAGAACAGTACATCTTCAACGTTTTCGAGGTGATAGTGAGCACATTAGAAACTAAGCTACAAAGAATAGAGAATCTAGATAAAGCAGTGGAACATCTCATGAGACGAGTTGAAGCTTTAGATTCGAGAGTTAATGACAACATTCTGAAAACTGATGCAATAATATCAAAATTAGGAAATCTTGATTTGAAACTATTTAGTCATATCGGACAGGAACAAGAGGAAGGATTCACAGAAAATACTACTAACAAACGCAACGAAAAGAAAATAAGCGACGCTCAGCTGCTTGACCGGAAACTAGAATCACTGGATCAAAAAGTTTCTGACATAGATACCAAGCTCGTCGGACTCAAAAATCAAATAGATAACAACTTCTTACCCGTCGATGATATCAACGCAGAGGCAAGTGAAAGAAAACCGATAAATTTAAACGTAATCGAAATCGCCAAAGGCCTAAACACAGAAGTTGTGAACGAAATAACCAAGGAAGTCGATCAACTAAGATCATCGGTATCAACTGTTGATCGCAAATTGCAATTCCACATCAACCTCGTTTCTGAAAACTTAGGTAAAGTACTTTATATGATGGCAGATGTGCACGCAGCAATAGTTGAGCCTGAAGCTGCATCGATAAACGTTAACAGCTTATTTAAAAACAGAACAGCGAGTAGCACCCCCTCGCCGGTCACTAAAAGCAGTAAGATCGATACGCTTGTCAATAAAATAATACCGATGATGAGTGTCTCCGAAAAAATGGACGAAGTTTGGGATGTGGTGGTTGGAACGAAGAGCTCTGTTGATGATTTGGTACCGAAATCAGACGAACTACTCACGCAAACCCAACGACAAGAAAGGGCTATAGGACAGATACATAACGATTTGAGAGTTAAAACCAATCTTATAATAGAAAACCTAGACATGGTAGAAAAACGTTTAAAAAAACAAGAAGATGATGTAGCAACCCTAGCTCAACGCCCAGTCCCTGCCGAATTGTTGCTGGATCCGACCATAGACCGACTAGTGGAATACGCACCGAACAGATACAGGGTGGAAGAACCCTCCACTGATCCCACAACGATCACAGTCTCCGCGACGACTATGCCGCCCTTCTCTACAATCAATAACAGCCCGAGCAGTCCGAGTGGCTCTAGCACGAGTCCCAGTGCCACTTCGACCCCGGCCAGCACAGGCGCCGCCACAACTGTCCCTATCGGCGGCAGTACCACGCCGCGGCTCGCAACGCGCAAAGGAGGCATTATCTTCCCCAGTGTCAAGAATAAACCCATCATCGGCAATAACACTTTCGCTTCGGAGATCGTTGCCAACTATAAAGACGTGAAAGGCTATTCGTGCGTAGATCTTCTTAACGCCGGCATGAGAGAATCAGGAGTTTATTACTTACAAATCAGGGGCACAACATATTGGTTCCTGAAAGTATTTTGTGAGCAAAATGTTGCCGACGGAGGTTGGACTGTAATACATCGTCGTGACGATTACGGTCAGCCAGCGGAGAATTTTAATCGTGATTGGAGCGATTATAAGAACGGCTTCGGGGACCCGAGCAAAGAGTTTTGGCTCGGCAACGAGAACATCTACATGCTGACCAACAATGACGACTACATGCTCAGAGTCGAACTTGAAGACTTCGATGGAAACAAAAGATACGCACAGTATTCGCACTTCAAGATATATTCCGAAGCGGAATACTACAAACTGGAGATTGAAGGGTACGAGGGTACAGCAGGCGACTCCCTCAACGATCCATGGTATGGGTCTAACAACAGCCCCTTCTCCACTTATAACAGAGACAACGATAGATCTTCGCTGAACTGCGCTTCAATGTTGAAGGGAGGTTGGTGGTGGAAGTCATGCGGTCGCGGCCTCAATGGGTTGTACTTGCATGATCCACAGGATCTTACCGCCAGACAAGGCATAGTATGGTTCCGCTGGAGAGGTTGGGACTACACCTTGAAGAGAGCGTCCATGATGATCAAGCCCAAAGGCCTGCAGCCTAACACGTGA
Protein
MNSELEQYIFNVFEVIVSTLETKLQRIENLDKAVEHLMRRVEALDSRVNDNILKTDAIISKLGNLDLKLFSHIGQEQEEGFTENTTNKRNEKKISDAQLLDRKLESLDQKVSDIDTKLVGLKNQIDNNFLPVDDINAEASERKPINLNVIEIAKGLNTEVVNEITKEVDQLRSSVSTVDRKLQFHINLVSENLGKVLYMMADVHAAIVEPEAASINVNSLFKNRTASSTPSPVTKSSKIDTLVNKIIPMMSVSEKMDEVWDVVVGTKSSVDDLVPKSDELLTQTQRQERAIGQIHNDLRVKTNLIIENLDMVEKRLKKQEDDVATLAQRPVPAELLLDPTIDRLVEYAPNRYRVEEPSTDPTTITVSATTMPPFSTINNSPSSPSGSSTSPSATSTPASTGAATTVPIGGSTTPRLATRKGGIIFPSVKNKPIIGNNTFASEIVANYKDVKGYSCVDLLNAGMRESGVYYLQIRGTTYWFLKVFCEQNVADGGWTVIHRRDDYGQPAENFNRDWSDYKNGFGDPSKEFWLGNENIYMLTNNDDYMLRVELEDFDGNKRYAQYSHFKIYSEAEYYKLEIEGYEGTAGDSLNDPWYGSNNSPFSTYNRDNDRSSLNCASMLKGGWWWKSCGRGLNGLYLHDPQDLTARQGIVWFRWRGWDYTLKRASMMIKPKGLQPNT
Summary
Uniprot
H9JRZ6
A0A212EQG7
A0A194PFQ4
A0A1Y1MTB1
E2BRI5
D6WII7
+ More
A0A182NAN6 A0A182IRN6 A0A084VYB9 A0A182K650 A0A182VSJ9 A0A151XGP0 A0A182QI16 A0A1W4X4Y5 F4WTS7 A0A1S4H0P9 A0A182RWF6 A0A182KYM1 A0A182M4J6 A0A158N9N4 A0A026WWG6 A0A151ISS2 A0A195BQ61 A0A2A3EGN5 A0A1J1HTG6 A0A087ZU46 A0A0M9A6E9 A0A1B6FW98 A0A1B6MPG5 W5JAJ6 A0A034V0Z3 A0A034V587 A0A2J7RD53 A0A336M4T3 A0A336M891 T1I5A9 E2A8Q1 B4KLU4 B4MQU3 E0W0S4 A0A0L7QN44 A0A182US15 A0A151ID12 A0A182HZ16 B4J6F8 A0A2R7WQW3 A0A2H1WFI7 A0A182YMV5 A0A2H8TH23 X1WJ47 A0A1B6JX33 A0A0J7L563 N6UMB2 A0A2S2N8R3 A0A3Q0IQL5 U4UAV8 A0A1B6CFN8 Q5BIB8 A0A0R1E8V4 A8QHX1 E8Z4Z6 A0A0Q5WLT6 A0A067QS92 B4ILC6 A0A182X879 E9FWM4 A0A0P8YCJ6 T1IZ12 B0W4Q0
A0A182NAN6 A0A182IRN6 A0A084VYB9 A0A182K650 A0A182VSJ9 A0A151XGP0 A0A182QI16 A0A1W4X4Y5 F4WTS7 A0A1S4H0P9 A0A182RWF6 A0A182KYM1 A0A182M4J6 A0A158N9N4 A0A026WWG6 A0A151ISS2 A0A195BQ61 A0A2A3EGN5 A0A1J1HTG6 A0A087ZU46 A0A0M9A6E9 A0A1B6FW98 A0A1B6MPG5 W5JAJ6 A0A034V0Z3 A0A034V587 A0A2J7RD53 A0A336M4T3 A0A336M891 T1I5A9 E2A8Q1 B4KLU4 B4MQU3 E0W0S4 A0A0L7QN44 A0A182US15 A0A151ID12 A0A182HZ16 B4J6F8 A0A2R7WQW3 A0A2H1WFI7 A0A182YMV5 A0A2H8TH23 X1WJ47 A0A1B6JX33 A0A0J7L563 N6UMB2 A0A2S2N8R3 A0A3Q0IQL5 U4UAV8 A0A1B6CFN8 Q5BIB8 A0A0R1E8V4 A8QHX1 E8Z4Z6 A0A0Q5WLT6 A0A067QS92 B4ILC6 A0A182X879 E9FWM4 A0A0P8YCJ6 T1IZ12 B0W4Q0
Pubmed
19121390
22118469
26354079
28004739
20798317
18362917
+ More
19820115 24438588 21719571 12364791 20966253 21347285 24508170 20920257 23761445 25348373 17994087 20566863 25244985 23537049 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 17550304 24845553 21292972
19820115 24438588 21719571 12364791 20966253 21347285 24508170 20920257 23761445 25348373 17994087 20566863 25244985 23537049 10731132 12537568 12537572 12537573 12537574 16110336 17569856 17569867 26109357 26109356 17550304 24845553 21292972
EMBL
BABH01016939
AGBW02013269
OWR43728.1
KQ459605
KPI91858.1
GEZM01021603
+ More
JAV88912.1 GL449965 EFN81677.1 KQ971334 EFA01358.1 ATLV01018354 KE525231 KFB42963.1 KQ982169 KYQ59527.1 AXCN02000615 GL888344 EGI62392.1 AAAB01008984 AXCM01000619 ADTU01009717 KK107083 EZA60076.1 KQ981064 KYN09889.1 KQ976428 KYM87818.1 KZ288260 PBC30452.1 CVRI01000020 CRK91351.1 KQ435737 KOX76883.1 GECZ01015378 JAS54391.1 GEBQ01002208 JAT37769.1 ADMH02002027 ETN59880.1 GAKP01022006 JAC36946.1 GAKP01022007 JAC36945.1 NEVH01005302 PNF38757.1 UFQS01000558 UFQT01000558 SSX04924.1 SSX25286.1 UFQS01000675 UFQT01000675 SSX06069.1 SSX26425.1 ACPB03000696 GL437663 EFN70130.1 CH933808 EDW09754.2 CH963849 EDW74482.1 DS235862 EEB19230.1 KQ414868 KOC59984.1 KQ977991 KYM98288.1 APCN01005843 CH916367 EDW01959.1 KK855310 PTY21949.1 ODYU01008327 SOQ51821.1 GFXV01000773 MBW12578.1 ABLF02020920 GECU01003967 JAT03740.1 LBMM01000726 KMQ97619.1 APGK01026539 APGK01026540 APGK01026541 KB740635 ENN79852.1 GGMR01000948 MBY13567.1 KB631992 ERL87741.1 GEDC01025143 JAS12155.1 BT021306 AE013599 AAX33454.1 EDP27998.1 CH892675 KRK05535.1 EDP27999.1 EFV87796.1 CH954177 KQS71081.1 KK853018 KDR12467.1 CH480869 EDW53778.1 GL732526 EFX87918.1 CH902626 KPU79159.1 JH431703 DS231838 EDS33895.1
JAV88912.1 GL449965 EFN81677.1 KQ971334 EFA01358.1 ATLV01018354 KE525231 KFB42963.1 KQ982169 KYQ59527.1 AXCN02000615 GL888344 EGI62392.1 AAAB01008984 AXCM01000619 ADTU01009717 KK107083 EZA60076.1 KQ981064 KYN09889.1 KQ976428 KYM87818.1 KZ288260 PBC30452.1 CVRI01000020 CRK91351.1 KQ435737 KOX76883.1 GECZ01015378 JAS54391.1 GEBQ01002208 JAT37769.1 ADMH02002027 ETN59880.1 GAKP01022006 JAC36946.1 GAKP01022007 JAC36945.1 NEVH01005302 PNF38757.1 UFQS01000558 UFQT01000558 SSX04924.1 SSX25286.1 UFQS01000675 UFQT01000675 SSX06069.1 SSX26425.1 ACPB03000696 GL437663 EFN70130.1 CH933808 EDW09754.2 CH963849 EDW74482.1 DS235862 EEB19230.1 KQ414868 KOC59984.1 KQ977991 KYM98288.1 APCN01005843 CH916367 EDW01959.1 KK855310 PTY21949.1 ODYU01008327 SOQ51821.1 GFXV01000773 MBW12578.1 ABLF02020920 GECU01003967 JAT03740.1 LBMM01000726 KMQ97619.1 APGK01026539 APGK01026540 APGK01026541 KB740635 ENN79852.1 GGMR01000948 MBY13567.1 KB631992 ERL87741.1 GEDC01025143 JAS12155.1 BT021306 AE013599 AAX33454.1 EDP27998.1 CH892675 KRK05535.1 EDP27999.1 EFV87796.1 CH954177 KQS71081.1 KK853018 KDR12467.1 CH480869 EDW53778.1 GL732526 EFX87918.1 CH902626 KPU79159.1 JH431703 DS231838 EDS33895.1
Proteomes
UP000005204
UP000007151
UP000053268
UP000008237
UP000007266
UP000075884
+ More
UP000075880 UP000030765 UP000075881 UP000075920 UP000075809 UP000075886 UP000192223 UP000007755 UP000075900 UP000075882 UP000075883 UP000005205 UP000053097 UP000078492 UP000078540 UP000242457 UP000183832 UP000005203 UP000053105 UP000000673 UP000235965 UP000015103 UP000000311 UP000009192 UP000007798 UP000009046 UP000053825 UP000075903 UP000078542 UP000075840 UP000001070 UP000076408 UP000007819 UP000036403 UP000019118 UP000079169 UP000030742 UP000000803 UP000002282 UP000008711 UP000027135 UP000001292 UP000076407 UP000000305 UP000007801 UP000002320
UP000075880 UP000030765 UP000075881 UP000075920 UP000075809 UP000075886 UP000192223 UP000007755 UP000075900 UP000075882 UP000075883 UP000005205 UP000053097 UP000078492 UP000078540 UP000242457 UP000183832 UP000005203 UP000053105 UP000000673 UP000235965 UP000015103 UP000000311 UP000009192 UP000007798 UP000009046 UP000053825 UP000075903 UP000078542 UP000075840 UP000001070 UP000076408 UP000007819 UP000036403 UP000019118 UP000079169 UP000030742 UP000000803 UP000002282 UP000008711 UP000027135 UP000001292 UP000076407 UP000000305 UP000007801 UP000002320
Pfam
PF00147 Fibrinogen_C
Interpro
SUPFAM
SSF56496
SSF56496
Gene 3D
CDD
ProteinModelPortal
H9JRZ6
A0A212EQG7
A0A194PFQ4
A0A1Y1MTB1
E2BRI5
D6WII7
+ More
A0A182NAN6 A0A182IRN6 A0A084VYB9 A0A182K650 A0A182VSJ9 A0A151XGP0 A0A182QI16 A0A1W4X4Y5 F4WTS7 A0A1S4H0P9 A0A182RWF6 A0A182KYM1 A0A182M4J6 A0A158N9N4 A0A026WWG6 A0A151ISS2 A0A195BQ61 A0A2A3EGN5 A0A1J1HTG6 A0A087ZU46 A0A0M9A6E9 A0A1B6FW98 A0A1B6MPG5 W5JAJ6 A0A034V0Z3 A0A034V587 A0A2J7RD53 A0A336M4T3 A0A336M891 T1I5A9 E2A8Q1 B4KLU4 B4MQU3 E0W0S4 A0A0L7QN44 A0A182US15 A0A151ID12 A0A182HZ16 B4J6F8 A0A2R7WQW3 A0A2H1WFI7 A0A182YMV5 A0A2H8TH23 X1WJ47 A0A1B6JX33 A0A0J7L563 N6UMB2 A0A2S2N8R3 A0A3Q0IQL5 U4UAV8 A0A1B6CFN8 Q5BIB8 A0A0R1E8V4 A8QHX1 E8Z4Z6 A0A0Q5WLT6 A0A067QS92 B4ILC6 A0A182X879 E9FWM4 A0A0P8YCJ6 T1IZ12 B0W4Q0
A0A182NAN6 A0A182IRN6 A0A084VYB9 A0A182K650 A0A182VSJ9 A0A151XGP0 A0A182QI16 A0A1W4X4Y5 F4WTS7 A0A1S4H0P9 A0A182RWF6 A0A182KYM1 A0A182M4J6 A0A158N9N4 A0A026WWG6 A0A151ISS2 A0A195BQ61 A0A2A3EGN5 A0A1J1HTG6 A0A087ZU46 A0A0M9A6E9 A0A1B6FW98 A0A1B6MPG5 W5JAJ6 A0A034V0Z3 A0A034V587 A0A2J7RD53 A0A336M4T3 A0A336M891 T1I5A9 E2A8Q1 B4KLU4 B4MQU3 E0W0S4 A0A0L7QN44 A0A182US15 A0A151ID12 A0A182HZ16 B4J6F8 A0A2R7WQW3 A0A2H1WFI7 A0A182YMV5 A0A2H8TH23 X1WJ47 A0A1B6JX33 A0A0J7L563 N6UMB2 A0A2S2N8R3 A0A3Q0IQL5 U4UAV8 A0A1B6CFN8 Q5BIB8 A0A0R1E8V4 A8QHX1 E8Z4Z6 A0A0Q5WLT6 A0A067QS92 B4ILC6 A0A182X879 E9FWM4 A0A0P8YCJ6 T1IZ12 B0W4Q0
PDB
4K0V
E-value=1.53904e-46,
Score=472
Ontologies
Topology
Length:
677
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00133
Exp number, first 60 AAs:
0.00072
Total prob of N-in:
0.00017
outside
1 - 677
Population Genetic Test Statistics
Pi
23.508498
Theta
18.741271
Tajima's D
0.459122
CLR
0.209979
CSRT
0.510674466276686
Interpretation
Uncertain
