Gene

KWMTBOMO00482

Annotation

Uncharacterized_protein_OBRU01_15813_[Operophtera_brumata]

Location

Bomo_Chr1(+):13909778-13910962      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 3.857

CDS

ATGAGCGTACTACGCTCACCGAATGGAGGCGGCGTGTCTCAAACGTATGGAGAATCTCAACCAAACCCATCGGTAACTCCCGATTTTGATACTCCAAAAATTACATTTAGAAACAAACGAAGGTCATCTAATAGCAACGATTGTGTCATGAAAGAAATCTTAGATGTGAAGAAACAGATGGCAGAAATGATGTCTTTTACGGCGTCAAGTAGTGTTGCCCAAACTGAGAATATAAACAAGTTGTACCAAGATGTCAGTGCTATGAAAGGGCAAGTTGATAAAATATGTAACAATATTGAATCCATCATCATCGAACAGGAAAAATTGAAGGTGGATGTGTCAAACGTGATGACGTCTACCAGTATATTGGGAAATAAAATTGAACTTCTTGAAAAAGAAGTGGAAGGACTTAAGTTTAAATCGTTGCATACACAAGAATCTGCGTCCATGAATCGCGTGAACTATAACAAGATGATTGCCGAATGTCAAGAACGTAGTCAGCGAGCAAAAAATATAATCGTATGCGGTATCATAGAAGCCACCTCTGAAAATGCTATGGAAAGATTGGAATATGACAGAAAAGAAATAATAAAACTTATTAAAATGGCCTCAAGTAAGTGTCCTGAACCTGAAAACATACACCGTCTAGGAAAATATCAACATGACAAAATCCGCCCCATTAAAGCTATTTTTAAATCAGAGGACACTGTTAAAGTTATACTTAGAAACCGAAATAACATGGCAGCTGCTAACGTCAAGATATACAGTGATCAAACTCCATATCAGAGAGAAACCTTACAAATCCTGAAACAAGAACTTGAAAATCGAATTTCGAATGGCGAAACTAATATTTCTATTAAATATGTAAAAGGAGAACCAGCAATAGTAGAATCCTTACCAAAAAACTCTGCGCCGGCAACAAACAATCTAGCACCAGAATAG

Protein

MSVLRSPNGGGVSQTYGESQPNPSVTPDFDTPKITFRNKRRSSNSNDCVMKEILDVKKQMAEMMSFTASSSVAQTENINKLYQDVSAMKGQVDKICNNIESIIIEQEKLKVDVSNVMTSTSILGNKIELLEKEVEGLKFKSLHTQESASMNRVNYNKMIAECQERSQRAKNIIVCGIIEATSENAMERLEYDRKEIIKLIKMASSKCPEPENIHRLGKYQHDKIRPIKAIFKSEDTVKVILRNRNNMAAANVKIYSDQTPYQRETLQILKQELENRISNGETNISIKYVKGEPAIVESLPKNSAPATNNLAPE

Uniprot

A0A0L7L3Z5   A0A2A4JC18   A0A0L7LNM8   A0A2W1C0D6   A0A2A4JSI3   A0A0L7LFP3   + More
A0A2A4IY01   A0A0L7KU39   A0A0L7K477   A0A0L7LQV1   A0A0L7LUD6   X1WNF8   A0A1B6KAJ5   A0A2W1BUR5   A0A1Y1M4J9   J9LR03   X1X2I3   J9L2B5   J9LGH4   A0A0K8S7G4   X1XE57   J9M0E0   J9K8H3   X1XD58   A0A0L7KTV2   A0A0L7KU72   A0A2S2QXN7   J9M1M5   X1XI42   J9LMY9   X1X7B6   X1WZ21   J9L1B6  

Pubmed

26227816    28756777    28004739    26823975   

EMBL

JTDY01003074    KOB70198.1    NWSH01001993    PCG69491.1    JTDY01000466    KOB77052.1    + More
KZ149900    PZC78580.1    NWSH01000655    PCG74997.1    JTDY01001257    KOB74378.1    NWSH01005753    PCG63973.1    JTDY01005835    KOB66566.1    JTDY01012433    KOB52272.1    JTDY01000300    KOB77810.1    JTDY01000106    KOB78836.1    ABLF02023526    ABLF02042209    GEBQ01031511    GEBQ01001359    JAT08466.1    JAT38618.1    KZ149930    PZC77405.1    GEZM01040702    JAV80764.1    ABLF02021964    ABLF02054879    ABLF02007491    ABLF02041729    ABLF02014485    GBRD01016604    GDHC01002967    JAG49222.1    JAQ15662.1    ABLF02024786    ABLF02002348    ABLF02003225    ABLF02003226    ABLF02005311    ABLF02011428    ABLF02012211    ABLF02059673    ABLF02012254    ABLF02012256    ABLF02012260    ABLF02041969    ABLF02012262    ABLF02059547    JTDY01005746    KOB66672.1    JTDY01005628    KOB66807.1    GGMS01013220    MBY82423.1    ABLF02021522    ABLF02041243    ABLF02019660    ABLF02041374    ABLF02019182    ABLF02019184    ABLF02019185    ABLF02037727    ABLF02065970   

Proteomes

UP000037510    UP000218220    UP000007819   

Pfam

PF00628   PHD        + More
PF00078   RVT_1
PF14529   Exo_endo_phos_2
PF02373   JmjC

Interpro

IPR036691   Endo/exonu/phosph_ase_sf        + More
IPR013083   Znf_RING/FYVE/PHD       
IPR019787   Znf_PHD-finger       
IPR011011   Znf_FYVE_PHD       
IPR001965   Znf_PHD       
IPR019786   Zinc_finger_PHD-type_CS       
IPR000477   RT_dom       
IPR005135   Endo/exonuclease/phosphatase       
IPR001841   Znf_RING       
IPR003347   JmjC_dom       

SUPFAM

SSF56219   SSF56219        + More
SSF57903   SSF57903       

Gene 3D

3.60.10.10     3.30.40.10    

ProteinModelPortal

A0A0L7L3Z5   A0A2A4JC18   A0A0L7LNM8   A0A2W1C0D6   A0A2A4JSI3   A0A0L7LFP3   + More
A0A2A4IY01   A0A0L7KU39   A0A0L7K477   A0A0L7LQV1   A0A0L7LUD6   X1WNF8   A0A1B6KAJ5   A0A2W1BUR5   A0A1Y1M4J9   J9LR03   X1X2I3   J9L2B5   J9LGH4   A0A0K8S7G4   X1XE57   J9M0E0   J9K8H3   X1XD58   A0A0L7KTV2   A0A0L7KU72   A0A2S2QXN7   J9M1M5   X1XI42   J9LMY9   X1X7B6   X1WZ21   J9L1B6  

KEGG

105842132    no KO assigned | (RefSeq) uncharacterized LOC105842132

GO

GO:0016021   GO:0046872  

Length:

313

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00787

outside

1  -  313

 

 

Pi

6.146874

Theta

15.268934

Tajima's D

-1.587237

CLR

0

CSRT

0.0467476626168692

Interpretation

Uncertain