SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00481
Pre Gene Modal
BGIBMGA012296
Annotation
hypothetical_protein_KGM_08822_[Danaus_plexippus]
Location in the cell
Extracellular   Reliability : 1.403 Mitochondrial   Reliability : 1.338 PlasmaMembrane   Reliability : 1.074
 

Sequence

CDS
ATGAAGCAAGCCGGCGTGCGATATTACTGTGAAAACACGAAACGCCCTAATATACCGTTCATTGTGAGCAAGAGCACCGCGCCTTCGCATAACATCGGCGTAAACATACAGCAGGTTTTGAATGGTCTGAAAGTGCAGCAACCCCTCTCCGGCATACCATCGACAATCGCTCATCACATGGGGTTGGGTCACGTTTCCACTTACGGTACAAGAAGTGCAACTGCGGTACGTTATGTACTTTATTGCTCAGTTTTAATTTTAACATATTTGTGGTTCACTAGTGATACCCGATTACGATTCGCTGTGAGTATCGATAGTATTAAGAAATAA
Protein
MKQAGVRYYCENTKRPNIPFIVSKSTAPSHNIGVNIQQVLNGLKVQQPLSGIPSTIAHHMGLGHVSTYGTRSATAVRYVLYCSVLILTYLWFTSDTRLRFAVSIDSIKK

Summary

ProteinModelPortal

Ontologies

GO

Topology

Length:
109
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
18.91178
Exp number, first 60 AAs:
0.043
Total prob of N-in:
0.92663
inside
1  -  74
TMhelix
75  -  92
outside
93  -  109
 
 

Population Genetic Test Statistics

Pi
12.827777
Theta
23.181719
Tajima's D
-1.390724
CLR
0.119202
CSRT
0.0760461976901155
Interpretation
Uncertain
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