SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00479
Pre Gene Modal
BGIBMGA012303
Annotation
PREDICTED:_uncharacterized_protein_LOC101740302_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.066
 

Sequence

CDS
ATGAATTGCGTTGTCTACGTCTTCTCAATTGAGCCCATAGAACAAACGTGTACGCGTTTCACAGCCGACGGTGAACGCAAATCGTCTTGTGGGGTATGCGGCGCGCGACTCGGTCCCGGCGTGGCTCAGGCGCACTTCCTGCAGGAGCTACAGCATTTGTACAGCCTGAGCGCTCTGCCGCGGGAGACGTTGCCGCCCTCCCACGCACTTCAACACCAGGACGAGGATGCGCGGTGGGAGACATACCAGCGTATTCGTGCAAATCGGCAGCGTCGCCTCAAGCTACGTACGAGGAAACGACACCACACAGTGGAGAGTATGCTTGGATACGACTTAGAAGAGGAACGTCGGGAGGAGAGGCCACGCGAATCTCGACCTTATGATGCCGAAGATGAACCAGTAGACGTTGAAGGAGACTCGCTGGGCTGGCCTGAGGCGGCCATCAATGTTGACGATAAAGAACAACGTCCCGACAGCGACAAGTTGCATATGAACTACGTTGAGGATCTCGAAATATCGAGCACAAACGACGCCATGCAGTCACCAGAACGCGTGAGGATCGAAACTCCGAAGCCGTTGGCGTTGGAGTGCACCAAGACGTGTGAGGGCCTCGAGCGTCCGGCCGAGGTGACCACGTCCGAGCCGTGGCCGACGACCGCGACTACTGCTGCTACGGCCACAGACGCTTGGCCGACCCTCGCCGCCGAAGCGTACATTCAGGCTACGCGCCACAAGATTGACGGAGAAAACATCCCGTCCTCCACAGACTCTCGCAACTAA
Protein
MNCVVYVFSIEPIEQTCTRFTADGERKSSCGVCGARLGPGVAQAHFLQELQHLYSLSALPRETLPPSHALQHQDEDARWETYQRIRANRQRRLKLRTRKRHHTVESMLGYDLEEERREERPRESRPYDAEDEPVDVEGDSLGWPEAAINVDDKEQRPDSDKLHMNYVEDLEISSTNDAMQSPERVRIETPKPLALECTKTCEGLERPAEVTTSEPWPTTATTAATATDAWPTLAAEAYIQATRHKIDGENIPSSTDSRN

Summary

Pfam
PF15926   RNF220
Interpro
IPR031824   RNF220_mid       

Ontologies

Topology

Length:
259
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00169
Exp number, first 60 AAs:
0.0013
Total prob of N-in:
0.04337
outside
1  -  259
 
 

Population Genetic Test Statistics

Pi
20.863772
Theta
29.540528
Tajima's D
-0.758423
CLR
0.011538
CSRT
0.190440477976101
Interpretation
Uncertain
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