SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00478
Pre Gene Modal
BGIBMGA012301
Annotation
PREDICTED:_uncharacterized_protein_LOC106130496_[Amyelois_transitella]
Location in the cell
PlasmaMembrane   Reliability : 2.316
 

Sequence

CDS
ATGGATGATATAAATTCGACATCACTTAGTTTCATTCCAGGCTGGCTAAAAATAATCCTAGAGGAAAGTGATGAAGAAGCGAAAGAAATGAGCTCGCCATGGGGTTTCAAAATGCTTGGAAAAACATTAAGGAAAATTATATGGAATATGTGTTCTATGATGGCCATTGAAACCAAAGGAGTGCCTGGTCAAGCTTGTCGGCTGGTGGAGCGTAGTATCGTTGCACGCATCAAGGAGAGTGGAAATATAAGTGGAACTGAGTGGGACCATTTTAAACGGCATCTAGCGATTCGTATACCTCTGATAATGGCTTCTGCAGTTCAGATAGCTGCCAAAATGTCACACGCCTCGGAGTCAATAAAAGCGAGCGTAATACAAAGGGTCCTTCAGATACGAGGATCAAACTATTCAATAGAAGAGATCAATCAATCAGAATGCGAAGTGCTTAAAAACTTAGATTTCCGTGTGCCGATATGGACGAGCGTCGAAGTGGCTACGCTTTTGGCCACCGAGGTCGGTATGACGAGCGAAATGATTTCCGGCGTCGAATTGATGGTTGACTTGGCCGAGTTCAACCGTTTCAAATTAGAAAACGACATGTGCATCACCGCGACCCCGTCCAACTCGTCATGTTTAATGAAGAAACGTTTGCGCACACTACACCTGACGGCGGGCGCAGTGATGGCCACAGTACAATATTACGAATTGACCGGGCTGGATCCGGTCGGTAAGTTAGCTAGTATTACACGGGTACCGGCGACGTTTATCACGTGCATCGCCGATTTTATCATAAAGTATTTGGATGAGGAAGATCTGCCGTACCTCCCTATGCCGCGAAAGCGAAAATTTAGTGAAGTGTGA
Protein
MDDINSTSLSFIPGWLKIILEESDEEAKEMSSPWGFKMLGKTLRKIIWNMCSMMAIETKGVPGQACRLVERSIVARIKESGNISGTEWDHFKRHLAIRIPLIMASAVQIAAKMSHASESIKASVIQRVLQIRGSNYSIEEINQSECEVLKNLDFRVPIWTSVEVATLLATEVGMTSEMISGVELMVDLAEFNRFKLENDMCITATPSNSSCLMKKRLRTLHLTAGAVMATVQYYELTGLDPVGKLASITRVPATFITCIADFIIKYLDEEDLPYLPMPRKRKFSEV

Summary

Pfam
PF00134   Cyclin_N
Interpro
IPR036915   Cyclin-like_sf        + More
IPR039890   CNTD1       
IPR006671   Cyclin_N       
IPR013763   Cyclin-like       
SUPFAM
SSF47954   SSF47954       

Ontologies

GO

Topology

Length:
286
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.33774
Exp number, first 60 AAs:
0.00965
Total prob of N-in:
0.04562
outside
1  -  286
 
 

Population Genetic Test Statistics

Pi
19.891297
Theta
18.892897
Tajima's D
0.225758
CLR
0.052239
CSRT
0.43882805859707
Interpretation
Uncertain
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