Gene

KWMTBOMO00476

Pre Gene Modal

BGIBMGA012297

Annotation

PREDICTED:_sterol_regulatory_element-binding_protein_cleavage-activating_protein_[Bombyx_mori]

Location

Bomo_Chr1(-):13809209-13837067      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 3.688

CDS

ATGGCAGGATCTACGCTTCCCGAGAGGGTAGCTCAAATTTATTATTCATATGGATTATTTTGTTCGTCGTACCCAATAACTGCAATCACGCTCGCACTCTCCATCGTACTGTTATGCTGTTATCCTCTTCTGAATGTTCCACTACCAGGAAATGTACCTACAGCGATCAATTTTCCACTTAACAGTGACCATCTTAGACAATCAACAGATCCTGGATGTGCAGATAATAAATGTACATCGACACCTACTTCTCAGTTGGACCTTCTATTCAATGAAACGCAAAGACTTCCATATATTTGGGCAAAGGACAAACCGCTACTGTATGTTCAACAAATCATTTTAAAAATTGGCGTATCACCATGGAATTCGAATTTGAAAATGTGGGACGCGTTCCGGGCTCCAATCCAAGAAGTGTTCCGGTTGTTAGAAACCATCAGAAATCACGAAGATCCAGATTTAAAACAAACTCTACAACAGAACTGCTATCAAATCGGAGCTATCAAACGACGCGAAAGCAAAGCCAGCATCGAACGTGTCCTACCGGAATACAGTTGTCTCCTTCTGTCACCAGCGAATTTGTGGCAACAAAACCTTCAAACGTTTTCACTCGACACTAACATAGTCAACACCGTTTACAACTATCAGAACTTGCAAAAAGGGAAAGTTTCAATAGCGGAAATGGCGTTCGGCATGCAAATGCGGGACACCGGAATAAAGCGGTATCCGTTGCGGGCCCGACCTCGTGTACTGCAATACGCTGTCACAATTTTCTACGACAACCCCGAAGACAGATTTATTCAATCACTCACCAAGAAACTCCAAGATATGTACCCCCTATATCAAGACAAGTCGCACGTCAATGTTGACGAGGTGACTCTCGTATATTATCCGGGGCAGTTCAATTACCGGGAACTCGTCCCATTGACAATAACGTTTGTCGGTTTATTTCTCTACGTATATTTTTCTGTAAGGAAGATCGAGTACATAAGATCTAAATTAGGACTCGCGGCCTGCGCCGTCGTGACGATAGCCGGGAGTTTAAGTATGTCGATGGGGATTTGTTTTTACTTCGGCTTCTCGTTGAGTCACCAGGGAAAAGAAATATTTCCGTATCTCATCATCATCGTTGGCTTGGAAAACGTATTAGTGTTGACCAAGAGCGTAACTTCGACCGACTCGAGGCTGGATGTCAAGATACGATTGGCGCAGGGACTCAGCAGGGAGGGATGGTCGATCACCAAAAACTTACTAACCGAAATCACTATATTCACAGTCAGTTTCTTTACTTTCGTACCGTTCATACAGGAGTTCTCCATATTCATGATAGTCAGTTTGTTGTCCGATTATTTTATACAAATTTTGTTTTTCGCTACCGTTCTCGGTATCGACGTGCGTCACATCGAGTACCTCCAAGATAAAAATAATAAATTGCACTTAAAAGAGTATTTTAGTATGCACAACGCGCTCAACTGGCGTTACAATAAAAGTTACACTGACGAGTTTAACTTTTCGCCGCAACCGATGACGAAATCGAAGTCCCATCCGAGACTGATCGGATTGGCCCAGAACAGCCCCACGGACGTGGTCGCCAACCGGAACTCTAGTCCGGGACATCAGGACAATCGCGTGCCGAAACGCATCAAGCTTGTGAACATGTGGGCGAGGACTAGGTTTTTTCAACGGGCCTTCATGCTGTGGATGCTCGTGTGGATATCCACGATCGTCTACGATTCCGGTGTCGTCGACTATTTCATTGGGAGCGCGGAAAAATTAGAAAACGTCGAGACGAACAAAAATTACGTCGATAAAAGGGAATCTACAAAGGAATCAATGTACGAGATGTTTTATAATAGTACAGATCGAAATACGGTGGTGTTCCCGCCCATGTTCGATATGGCCGACTCTGATAAAGCACTCGACACAAACGACACTATAATGTTGAAGCATTCTCCGCATTCGCGGCCGTGGTCTAGGCTTTCTGACTACCATTGGTCAACTATACTATCCAACTACAATGAATCGACAGCGGGTCGTTACGTTGTAATGCTACCACCAACGCTACTGAGTCATCGCGTAAGTCCCGAACTTGCTGTGGGAGTTCGGAATCCGGACGAGAAGGATCCACCACCGCTGAGATGGCAAGCATTAGCTGCAGCGCTTGATCCCATTGACATACTACCCGATTTCGACGTTGTCGACGGGAAAGGCTCCCCGCTCCAATGGGGCAAGGGGTCCGAACTGCCTATATACCCTACAACACCAATGGAAATTCTTCTGCTCGCCATACTGTGCTCCATAAGCGTCGCCGTCATCGCCTACATGATGGTGGTTTTGTACAGGTGTATTTGTTCACGGCATTATGCGGAATGGAGGGCTTCTTGGAACGATAACGAGGAATACCGGAGGATCATAGCCAAGCAACCGGCCATTCAGTTGGTAATGGAAGCAGTGCCTTTGGTCGTAGCCGGCCATAGCCAGGAAGTGGAGTGCCTGGTGACCGATGGTGAGAAGATAGTTAGTTCTTGCCTCCAAGGCAATATAAAAGTATGGGACTCGCAGAACGGAGAAATCATCACAAACATTGATAGAGAAGCTTTCTTCAACCTACAGAATCTATTACACAGTAAAGCTAAATCAAAAAGGTGCAGTTATCACGGTGACCTACGTGATAATGAAGATGCCTACGAAGTAGTTCCAACATCGAAAAATAACAAGCCAGTTCCTCAATTGCGAAAAGGTTTGAGTTCGTATTTAAGTGGATTGCGATTTCGTCCCGCATCGAGCGAGCGTGTGCCGAATCTTTCCGTAGCGGACACCACTAAGTATGAATTCGCGAAAAGTTACAGATCTATATACTACACAAACGAAAATGACGACGTTTATAATTGTAACGAATGCAAAGAAAACATTGACATAAACAATTTAAACATAGCCAAAACTAACAAAAGTACTAACAGTATTCAAGAAGATGACTTAAGTAAAGATATATTAGAGAATATGGAAGCTAGCAATAATCTAAGAAATAGAAGTAAGAATAAAACGTATAATGAGGAGCGACCGAGAACTAAGCAAGCAAGCGGTTCAGCTGCTACCAGTACCTTGGATTGGCAAGGGAAACCGATTCTAGAATCTCCTGTCTGGTGTATGGACTTTAGCAATGATCTCATCATATTAGGCTGTGCGGATGGCAGACTTGAGTTCTGGGAAGCGAGCACGGGACGACTTATGTGCGTGTGCGGGGGCGGCGAGGGCGTGACGCACGTGCGGGCGCTGGCGGGCGCGGCGCGGGTGTGTGCGGCCTCGCTCTCCGGGCACCTCACTCTGATGCGCCTCGACGCCTACAACAGTGCGTCGGGCGCCCATGTCGACTGGGGCTTCAGCACCGCGCACAGACGAACGCACAAGCGGAACGGTTCGACCGGCTCGTTACAGACGAGCTTCGGCGTGAACGACGAAAGCTCCCGATACAGAACTAATTTCACCTACAAAAGCGATCCTAATGACGGAGAAGAGGTGGTGTGCGTTCGAATAGCGCAGTGCAGGCCTCATCAGCAGCCTGTTACTGAGATGCACTCGGAAGGCGGTCGCATCTTAACCGGAGGTCAGGATCACGTGGTCAAGGTGTTCTCTAGCGCGGAATTAACGCCTCTCTTTACACTGCACGGACACTGCGGACCTATAACCAGTTGCTTCATCGATCACGCGACTCCAACGATAGCTGGGAGCGGATCGCAGGACGGCCTCCTCTGCGTGTGGGACCTGCATACTGGCGCGTGCCTGTACAGTATGCAGGCTCACGACGGCGCAGTGACGTCACTGGCGTACACCGCCTCGTACGTTGTGTCGGCGGGCGCTGATGAACGACTCTGCATATGGGATCGCTTTCAAGGGCATATGCTCAACTCCATACACGTGGGGCTCAATTATATGAGTCGTATGCTGCCCTTAACTCACACCCTGCTCGTGATGGGCGACAGAAGCGGCATCACCGTCTACGACCTGAGCAGCGGTGACGTCATAAGACGAGTTTTACTCGGTCAAAGCGACGGGTGTATTTTCGTAAGACAAATATTGCCTCTGAAAGACGCTATTGTGTGCGATTACGCGAATCAATTGAGGATAGTGCGCTTCCCTCTCGTCTCTCGGCTCGATTTAAAGAGCGACTAA

Protein

MAGSTLPERVAQIYYSYGLFCSSYPITAITLALSIVLLCCYPLLNVPLPGNVPTAINFPLNSDHLRQSTDPGCADNKCTSTPTSQLDLLFNETQRLPYIWAKDKPLLYVQQIILKIGVSPWNSNLKMWDAFRAPIQEVFRLLETIRNHEDPDLKQTLQQNCYQIGAIKRRESKASIERVLPEYSCLLLSPANLWQQNLQTFSLDTNIVNTVYNYQNLQKGKVSIAEMAFGMQMRDTGIKRYPLRARPRVLQYAVTIFYDNPEDRFIQSLTKKLQDMYPLYQDKSHVNVDEVTLVYYPGQFNYRELVPLTITFVGLFLYVYFSVRKIEYIRSKLGLAACAVVTIAGSLSMSMGICFYFGFSLSHQGKEIFPYLIIIVGLENVLVLTKSVTSTDSRLDVKIRLAQGLSREGWSITKNLLTEITIFTVSFFTFVPFIQEFSIFMIVSLLSDYFIQILFFATVLGIDVRHIEYLQDKNNKLHLKEYFSMHNALNWRYNKSYTDEFNFSPQPMTKSKSHPRLIGLAQNSPTDVVANRNSSPGHQDNRVPKRIKLVNMWARTRFFQRAFMLWMLVWISTIVYDSGVVDYFIGSAEKLENVETNKNYVDKRESTKESMYEMFYNSTDRNTVVFPPMFDMADSDKALDTNDTIMLKHSPHSRPWSRLSDYHWSTILSNYNESTAGRYVVMLPPTLLSHRVSPELAVGVRNPDEKDPPPLRWQALAAALDPIDILPDFDVVDGKGSPLQWGKGSELPIYPTTPMEILLLAILCSISVAVIAYMMVVLYRCICSRHYAEWRASWNDNEEYRRIIAKQPAIQLVMEAVPLVVAGHSQEVECLVTDGEKIVSSCLQGNIKVWDSQNGEIITNIDREAFFNLQNLLHSKAKSKRCSYHGDLRDNEDAYEVVPTSKNNKPVPQLRKGLSSYLSGLRFRPASSERVPNLSVADTTKYEFAKSYRSIYYTNENDDVYNCNECKENIDINNLNIAKTNKSTNSIQEDDLSKDILENMEASNNLRNRSKNKTYNEERPRTKQASGSAATSTLDWQGKPILESPVWCMDFSNDLIILGCADGRLEFWEASTGRLMCVCGGGEGVTHVRALAGAARVCAASLSGHLTLMRLDAYNSASGAHVDWGFSTAHRRTHKRNGSTGSLQTSFGVNDESSRYRTNFTYKSDPNDGEEVVCVRIAQCRPHQQPVTEMHSEGGRILTGGQDHVVKVFSSAELTPLFTLHGHCGPITSCFIDHATPTIAGSGSQDGLLCVWDLHTGACLYSMQAHDGAVTSLAYTASYVVSAGADERLCIWDRFQGHMLNSIHVGLNYMSRMLPLTHTLLVMGDRSGITVYDLSSGDVIRRVLLGQSDGCIFVRQILPLKDAIVCDYANQLRIVRFPLVSRLDLKSD

Uniprot

H9JRY7   A0A2H1WVZ6   A0A194QZL4   A0A194PEN5   A0A2A4J5H9   A0A212EQI2   + More
A0A2A4J3T2   A0A2A4J5E1   A0A232EU08   A0A310SJD1   A0A195C2A4   A0A0L7RAN3   A0A088ASY4   A0A158NN36   A0A151JQA8   A0A195BTS1   A0A1Y1M6P5   E2AJT3   F4X7I1   A0A0C9QWW6   A0A1W4WPE7   A0A3L8D4W0   D6WLE2   A0A0J7NKP0   E2BGB3   A0A026W3S0   W4VSE5   A0A182RLJ0   A0A182MRB0   A0A1B6CPD3   A0A1Q3F4H9   A0A1B6DX23   A0A1Q3F4L8   A0A1Q3F4Q8   A0A2A3E702   A0A084WCI9   A0A336L177   A0A182P5P6   A0A182LH98   A0A182JU38   E0VRD4   A0A1B6GIX4   A0A182UP68   A0A182HDQ9   A0A336MGS4   A0A1J1HRT4   B0X214   A0A182HY49   A0A182WXH4   A0A1D2MRY1   A0A0A9YBG3   A0A2S2R3Z4   J9K836   A0A2H8TLV4   A0A1B6I5R4   A0A182TP90   A0A0K8U0I1   L7MHT6   A0A131YWP8  

Pubmed

19121390    26354079    22118469    28648823    21347285    28004739    + More
20798317    21719571    30249741    18362917    19820115    24508170    24438588    20966253    20566863    26483478    27289101    25401762    26823975    25576852    26830274   

EMBL

BABH01016927    BABH01016928    ODYU01011417    SOQ57146.1    KQ461108    KPJ09036.1    + More
KQ459605    KPI91821.1    NWSH01003266    PCG66652.1    AGBW02013269    OWR43735.1    PCG66651.1    PCG66650.1    NNAY01002188    OXU21849.1    KQ764421    OAD54522.1    KQ978344    KYM94957.1    KQ414618    KOC67890.1    ADTU01020975    KQ978705    KYN29132.1    KQ976406    KYM91676.1    GEZM01040958    JAV80688.1    GL440100    EFN66249.1    GL888840    EGI57619.1    GBYB01005167    JAG74934.1    QOIP01000013    RLU15289.1    KQ971343    EFA03461.2    LBMM01003878    KMQ93030.1    GL448138    EFN85276.1    KK107467    EZA50256.1    GANO01000062    JAB59809.1    AXCM01001256    GEDC01021998    JAS15300.1    GFDL01012574    JAV22471.1    GEDC01007082    JAS30216.1    GFDL01012617    JAV22428.1    GFDL01012532    JAV22513.1    KZ288361    PBC27006.1    ATLV01022672    ATLV01022673    ATLV01022674    KE525335    KFB47933.1    UFQS01001435    UFQT01001435    SSX10880.1    SSX30558.1    DS235465    EEB15940.1    GECZ01007398    JAS62371.1    JXUM01130316    KQ567562    KXJ69369.1    UFQT01001190    SSX29395.1    CVRI01000020    CRK90733.1    DS232276    EDS38944.1    APCN01004491    LJIJ01000613    ODM95859.1    GBHO01013183    GBHO01013182    GDHC01021140    JAG30421.1    JAG30422.1    JAP97488.1    GGMS01015523    MBY84726.1    ABLF02037163    GFXV01003175    MBW14980.1    GECU01025466    JAS82240.1    GDHF01032494    JAI19820.1    GACK01001273    JAA63761.1    GEDV01006216    JAP82341.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000215335    + More
UP000078542    UP000053825    UP000005203    UP000005205    UP000078492    UP000078540    UP000000311    UP000007755    UP000192223    UP000279307    UP000007266    UP000036403    UP000008237    UP000053097    UP000075900    UP000075883    UP000242457    UP000030765    UP000075885    UP000075882    UP000075881    UP000009046    UP000075903    UP000069940    UP000249989    UP000183832    UP000002320    UP000075840    UP000076407    UP000094527    UP000007819    UP000075902   

PRIDE

H9JRY7   

Pfam

PF12349   Sterol-sensing        + More
PF00400   WD40

Interpro

IPR019775   WD40_repeat_CS        + More
IPR030225   SCAP       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR000731   SSD       
IPR011044   Quino_amine_DH_bsu       
IPR017986   WD40_repeat_dom       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR011047   Quinoprotein_ADH-like_supfam       

SUPFAM

SSF50969   SSF50969        + More
SSF50978   SSF50978       
SSF50998   SSF50998       

Gene 3D

2.130.10.10    

ProteinModelPortal

H9JRY7   A0A2H1WVZ6   A0A194QZL4   A0A194PEN5   A0A2A4J5H9   A0A212EQI2   + More
A0A2A4J3T2   A0A2A4J5E1   A0A232EU08   A0A310SJD1   A0A195C2A4   A0A0L7RAN3   A0A088ASY4   A0A158NN36   A0A151JQA8   A0A195BTS1   A0A1Y1M6P5   E2AJT3   F4X7I1   A0A0C9QWW6   A0A1W4WPE7   A0A3L8D4W0   D6WLE2   A0A0J7NKP0   E2BGB3   A0A026W3S0   W4VSE5   A0A182RLJ0   A0A182MRB0   A0A1B6CPD3   A0A1Q3F4H9   A0A1B6DX23   A0A1Q3F4L8   A0A1Q3F4Q8   A0A2A3E702   A0A084WCI9   A0A336L177   A0A182P5P6   A0A182LH98   A0A182JU38   E0VRD4   A0A1B6GIX4   A0A182UP68   A0A182HDQ9   A0A336MGS4   A0A1J1HRT4   B0X214   A0A182HY49   A0A182WXH4   A0A1D2MRY1   A0A0A9YBG3   A0A2S2R3Z4   J9K836   A0A2H8TLV4   A0A1B6I5R4   A0A182TP90   A0A0K8U0I1   L7MHT6   A0A131YWP8  

PDB

6G6N     E-value=8.45317e-14,     Score=192

KEGG

101740160    no KO assigned | (RefSeq) sterol regulatory element-binding protein cleavage-activating protein

GO

GO:0000139   GO:0032934   GO:0032933   GO:0005789   GO:0016021   GO:0005515   GO:0006098   GO:0016491   GO:0003676   GO:0030126   GO:0005488   GO:0003677   GO:0003707   GO:0007169  

PANTHER

PTHR46378  

Length:

1388

Number of predicted TMHs:

7

Exp number of AAs in TMHs:

162.526800000001

Exp number, first 60 AAs:

23.13646

Total prob of N-in:

0.97823

POSSIBLE N-term signal

sequence

inside

1  -  12

TMhelix

13  -  35

outside

36  -  304

TMhelix

305  -  322

inside

323  -  334

TMhelix

335  -  357

outside

358  -  366

TMhelix

367  -  384

inside

385  -  414

TMhelix

415  -  434

outside

435  -  438

TMhelix

439  -  461

inside

462  -  756

TMhelix

757  -  779

outside

780  -  1388

 

 

Pi

20.955282

Theta

22.409524

Tajima's D

-0.968686

CLR

0.027353

CSRT

0.143342832858357

Interpretation

Uncertain