Silkworm Genome Informatics Database

Gene

KWMTBOMO00471

Annotation

PREDICTED:_uncharacterized_protein_LOC105841861_[Bombyx_mori]

Location

Bomo_Chr1(+):13681471-13690744 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.398

CDS

ATGATTGCTCCTCAGCAAAGCTACATATGTTTAAATGAAGCCTGCCTGCAAGAAGCTTTATTGAACCGCGCTATTTCTATGAGCTCTGGCCTCGACTCAGCCCACGGACAAGGGCGACGGAAAGCCTCCAAATCCAATCGAGTAACCTGGTTAGCGAGCGAAGGATTAACAAACTACTTCAGACGTGTTATACAAGATGAAAAAACCAGGCAGATGCAAGTATGTCATTCGTATCAAGATTTTTCGACGATACCCGAGAATAATCTTTATGGACCAAAAGTGGATTCCAAGGGCAGAAGACTTTCGTACCAGCGAGCCGTGTCAGGAGAAGATCCGGTACCTCCTTCAAGGTACCAAGACTCCAGTTTGAGAAGAAAAGCTTTGATACCGGAAAATTTAGAGGTATGA

Protein

MIAPQQSYICLNEACLQEALLNRAISMSSGLDSAHGQGRRKASKSNRVTWLASEGLTNYFRRVIQDEKTRQMQVCHSYQDFSTIPENNLYGPKVDSKGRRLSYQRAVSGEDPVPPSRYQDSSLRRKALIPENLEV

Uniprot

A0A1E1WPP9 A0A1E1WLV9 A0A194QZL9 A0A194PGI5 A0A2A4JI61 A0A212EQG5 + More
A0A2W1BLW0

Pubmed

26354079 22118469 28756777

EMBL

GDQN01002167 JAT88887.1 GDQN01003064 JAT87990.1 KQ461108 KPJ09041.1 + More
KQ459605 KPI91819.1 NWSH01001381 PCG71466.1 AGBW02013269 OWR43740.1 KZ149977 PZC75908.1

Proteomes

UP000053240 UP000053268 UP000218220 UP000007151

Pfam

PF00621 RhoGEF

Interpro

IPR035899   DBL_dom_sf        + More
IPR000219   DH-domain
IPR040181   PKHG5/7
IPR011993   PH-like_dom_sf

SUPFAM

SSF48065 SSF48065

Gene 3D

1.20.900.10 2.30.29.30

CDD

cd00160 RhoGEF

ProteinModelPortal

A0A1E1WPP9 A0A1E1WLV9 A0A194QZL9 A0A194PGI5 A0A2A4JI61 A0A212EQG5 + More
A0A2W1BLW0

KEGG

105841861 no KO assigned | (RefSeq) uncharacterized LOC105841861

GO

GO:0005089 GO:0035023

PANTHER

PTHR13217

Length:

135

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00167

Exp number, first 60 AAs:

0.00139

Total prob of N-in:

0.21440

outside

1 - 135

Pi

14.175726

Theta

17.536758

Tajima's D

-1.619395

CLR

0.448214

CSRT

0.0443477826108695

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics