SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00469
Pre Gene Modal
BGIBMGA013337
Annotation
PREDICTED:_uncharacterized_protein_LOC105841861_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 4.227
 

Sequence

CDS
ATGGATCGCTTCAGGCAAAAATCTAAAAAAGACAAACCAACAAAATATGTGGATAAAGAGAAATCCCCTTCTTTCATCGCAGATGTTAAAACATTAAAAGAGAACATTAAAATAAGGGAGATATTAAGAACTGTCAAAATGAACAGCAGCATGCGGATAAAGGCTCCCAAGGGTAGTAAGGTTATGCAAAATAAAGATTTCAATGACAACGAAGATCTCTTTGATGAAATGGAAAATGTTGAAGCAGATAGTTCGGCCGTTCCAAGCGCGACAAATCCAGATGTCGTCCTTCACAGCAGTATTGAAACTAACGAAACTATTGATACAGATGAAACTCTGAATGAAGATTGTGCAAACAGTGACGACCAATTAAATAGTTCAACGAATACCGATAAGCCCAATGAGGATATCAATGTCAACTCGATGGCTTGTTCGTTGAGAAAGTCTAGCAGTATAGCTGGTGATTTATGTGATTATGTTTGCATTGATTCAAGTATCGAACAAAATAATATACAGGAATCAGATACTAATGTCGTACAAACCCCCCTCGAAAGTCCACAAGTCAAAGCCCGTGATCGTAAGCTATCCTTAGACCAAACAATGTTGACAAGACGTGGAGGCTTCTCACAATCTGAATTAGACCTACATTCGATTGACGAAAAATCCAAACATAAGCCGAAGGGGGTCAATGTCAGTTTCGTTACAATCGCTGAATGA
Protein
MDRFRQKSKKDKPTKYVDKEKSPSFIADVKTLKENIKIREILRTVKMNSSMRIKAPKGSKVMQNKDFNDNEDLFDEMENVEADSSAVPSATNPDVVLHSSIETNETIDTDETLNEDCANSDDQLNSSTNTDKPNEDINVNSMACSLRKSSSIAGDLCDYVCIDSSIEQNNIQESDTNVVQTPLESPQVKARDRKLSLDQTMLTRRGGFSQSELDLHSIDEKSKHKPKGVNVSFVTIAE

Summary

Pfam
PF00621   RhoGEF
Interpro
IPR011993   PH-like_dom_sf        + More
IPR000219   DH-domain       
IPR040181   PKHG5/7       
IPR035899   DBL_dom_sf       
SUPFAM
SSF48065   SSF48065       
Gene 3D

Ontologies

Topology

Length:
238
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.35580
outside
1  -  238
 
 

Population Genetic Test Statistics

Pi
27.503344
Theta
22.39986
Tajima's D
0.747634
CLR
0.331869
CSRT
0.60081995900205
Interpretation
Uncertain
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