SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00461  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA013318
Annotation
Bem46-like_protein_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.131
 

Sequence

CDS
ATGTATCAGGTAGTGAGGGTTTTACTGTACCGACTTTTGATTGTATCCACTATAACACTATTTTCTAGTATTTTACTATTTTGGTTTCATGGGTTCTTAACAGCATTTGGTATATTCACCTTAGGCATATCAGGCATTCTTTACTGCGCTCAAGATTTGCTGCTTTACTATCCCAATGATCCACCTGACTCAAGAGTTTTTGTTCTTCAGCCAAGTAATTACAAGTTGCCATATGAAAGTATAAAAATTAACAATAAAGATGGATTAAAAATACACATGTTTCTTGTAAAGCAGCCATTCAATAGCAAATATATACCTACAATGATATTTTTCCACGGTAATGCTGGAAATATGGGGCAAAGGTTGTCTAATGTATCTGGATTCTATCACAAGTTAAATGTCAATGTACTTATGGTTGAGTACAGAGGCTATGGATTATCAGAAGGAACGCCGTCCGAACGGGGCCTATATATTGATGCCCAATGTGCTATTGATTACATCTTGGAAAGAACTGATGTTGATACTAGTAGGATTATTTTGTTTGGAAGATCATTAGGTGGAGCAGTGGCAATTGATCTGGCATCTCGTTTGGAATACAGGAACAAAATTTGGGCATTAGTGGTGGAAAATACTTTCACTAGTATACCAGACATGGCACAGATCATTTTAAAATGGAGATGCCTAAATTGGCTACCACAATTCTGCCACAAAAATAAGTACATGTCTTTGAATAAAATTGCACATGTCATTTCACCTACACTCGTGATATGCGGATCAAATGACGCTTTAGTGCCTCCATCCATGGCCAGAGAGCTGTATACGCGCTGTGGATCTATCTGCAAGCAAATGGTGGTCATACCAGGTGGAGGACATGATGACACCTGGACGTGTAGGGAATACTATCCTTCAATGCAACAATTTTTAGTTAACGTTCCAGCACTACCAAGTGAGATTGGACCATTTTTTGAAAAAAATAATGAGTCTGCTCGACTTGGCGTTGTACTCACTGTTTAA
Protein
MYQVVRVLLYRLLIVSTITLFSSILLFWFHGFLTAFGIFTLGISGILYCAQDLLLYYPNDPPDSRVFVLQPSNYKLPYESIKINNKDGLKIHMFLVKQPFNSKYIPTMIFFHGNAGNMGQRLSNVSGFYHKLNVNVLMVEYRGYGLSEGTPSERGLYIDAQCAIDYILERTDVDTSRIILFGRSLGGAVAIDLASRLEYRNKIWALVVENTFTSIPDMAQIILKWRCLNWLPQFCHKNKYMSLNKIAHVISPTLVICGSNDALVPPSMARELYTRCGSICKQMVVIPGGGHDDTWTCREYYPSMQQFLVNVPALPSEIGPFFEKNNESARLGVVLTV

Summary

EMBL
DQ443187    ABF51276.1    BABH01039784    ODYU01006633    SOQ48646.1    NWSH01003445    + More
PCG66281.1    KQ461196    KPJ06399.1    KQ459605    KPI91898.1    AGBW02014274    OWR42000.1    KQ971358    EFA08226.1    ABLF02012309    APGK01057597    BT127067    KB741280    KB631855    AEE62029.1    ENN70983.1    ERL86756.1    GEZM01097321    JAV54273.1    GGMR01020321    MBY32940.1    GGMS01016681    MBY85884.1    GL436596    EFN71753.1    KK852591    KDR20716.1    QOIP01000003    RLU24496.1    LBMM01000702    KMQ97705.1    DS235854    EEB18888.1    KK107419    EZA51071.1    LJIJ01000269    ODM99589.1    GEDC01030770    JAS06528.1    KZ288191    PBC34493.1    KQ981768    KYN35993.1    GL451853    EFN78368.1    ACPB03013645    NEVH01002981    PNF41167.1    ADTU01003782    NNAY01003932    OXU18633.1    KQ435687    KOX81367.1    JXUM01017095    JXUM01017096    JXUM01017097    JXUM01017098    JXUM01017099    GAPW01002398    KQ560475    JAC11200.1    KXJ82219.1    GFDL01003144    JAV31901.1    GFDL01003151    JAV31894.1    DQ440245    CH477247    ABF18278.1    EAT46146.1    GECL01000502    JAP05622.1    ATLV01014613    KE524975    KFB39225.1    GEDV01007619    JAP80938.1    AXCM01003320    GGLE01005750    MBY09876.1    GFPF01005647    MAA16793.1    GBHO01025820    GDHC01017207    JAG17784.1    JAQ01422.1    GBBI01003320    JAC15392.1    KQ414705    KOC63227.1    AAZX01002181    GECU01007706    JAT00001.1    GGFL01004446    MBW68624.1    GGFM01008455    MBW29206.1    KQ434783    KZC04841.1    GGFK01011044    MBW44365.1    GECZ01004538    JAS65231.1    DS231942    EDS28210.1    AXCN02000632    HACA01009531    CDW26892.1    GGFJ01007074    MBW56215.1    KQ979032    KYN24336.1    GDHC01004004    JAQ14625.1    CH933807    EDW12293.1    AAAB01008944    EAA10110.4    APCN01000649    BT077775    ACO12199.1    CH902620    EDV31864.1    ADMH02000452    ETN66425.1    GL732643    EFX69062.1    GDIP01204340    JAJ19062.1    GFWV01003187    MAA27917.1    GDIP01228387    GDIP01226176    GDIP01186347    GDIP01158055    GDIP01149105    GDIP01142199    GDIP01085510    GDIP01074709    GDIP01070261    GDIQ01072258    LRGB01003124    JAJ65347.1    JAN22479.1    KZS04184.1    GDIQ01107244    JAL44482.1    GDIQ01111193    JAL40533.1    GDIQ01081363    JAN13374.1    CP012523    ALC38338.1    CH916368    EDW03165.1    GDIP01169139    JAJ54263.1    GDIP01078803    JAM24912.1    GDIQ01153024    JAK98701.1    CH940654    EDW57785.1    CCAG010002366    KQ759893    OAD62086.1    KQ977004    KYN06458.1    JXJN01022943    GDIQ01148986    JAL02740.1    GDIQ01230346    JAK21379.1   
Pfam
PF12146   Hydrolase_4        + More
PF00561   Abhydrolase_1
PF03959   FSH1
PF07859   Abhydrolase_3
PF05677   DUF818
PF12697   Abhydrolase_6
Interpro
IPR022742   Hydrolase_4        + More
IPR029058   AB_hydrolase       
IPR000073   AB_hydrolase_1       
IPR005645   FSH_dom       
IPR013094   AB_hydrolase_3       
IPR008536   DUF818       
SUPFAM
SSF53474   SSF53474       
Gene 3D
PDB
2WTN     E-value=0.00112589,     Score=99

Ontologies

Topology

Length:
337
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
34.6965700000001
Exp number, first 60 AAs:
33.57158
Total prob of N-in:
0.99366
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  337
 
 

Population Genetic Test Statistics

Pi
1.859027
Theta
3.9148
Tajima's D
-1.536702
CLR
0.06836
CSRT
0.0460976951152442
Interpretation
Uncertain
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