Gene

KWMTBOMO00456

Pre Gene Modal

BGIBMGA003354

Annotation

PREDICTED:_uncharacterized_protein_LOC106720810_[Papilio_machaon]

Location

Bomo_Chr1(+):13293915-13301389      View in EpiBrowser

Full name

ATP-dependent DNA helicase      

Location in the cell

Nuclear   Reliability : 3.215

CDS

ATGTCGTCGACCGAGTCGGAGTCTGTTTCAAATGCAGAGTACGAAAGTTTATCCCAGAAAATCATCGTGGAAGTACAGAAAAGACCAGCTTTATACGATACTACTTTGCGTCAATACAGTGATAGAAATGTGAAAAATAAACTTTGGGAGGAAGTTTATCACAACGTAGTTAATAATTGGATGACACTGTCGGAGGCTGAGAAAAAAAAGAAGGGTAGTACAATACAAAAGAAATGGAAGAATATGCGCGACAGTTTTTCTAAAGAATTATACAGCGTGGTAGTTAAGGTAGCTGTTAGATGTAGACTCAGGCCCGTCAGACCCTGGATGCTGAACGCCACGCATCTCAGAGCTGCTGAGACAGTGGAACAGACTCAGACACGTCGAGTTTTAGATGCCGAACGTCACGCGCAATTGATTGCGGCAGAGACTGACGAAGATTCACAAAGACGACGTCTTTTAAATGCTGAACGGCAGGCAGAAAGAAGACGTACGTTTTCAATGAGTACGTGGGAGGCATTTAATGGTGCCGCTTTTGAGTATGACCCTTTGATCGACTATGTTAATCACCGATTGGTTATCATTGGGAGAATGGATAAAAAATGCAGATATTGTGGAGCACTGAAATGGAAAGAAGAAACTCCAGGTATGTGCTGTTCTGGTGGAAAGGTTAAAATTCCATTACTTGGCGAGCCAGAGGAACCTCTTAAATCTTTACTTTTATACGACAGTAACGAATCGCGCCGGTTTTTAAGCAGGATTAGAAAGTATAATTCTTGCTTTCAGATGACGTCATTTGGTGTAGATAAGGAGGTCGTAATGCCTGGATTTTCACCTACTTTTACCATCCAAGGACAGGTGTATCACAGGATTGGTTCCTTACTTCCCGCAAATAATGAACAACCAAAGCTTTTGCAACTTTATTTCATGGGCGATGAAAAAAACGAAGCTGATCGCAGGTGTCAAAATATACAAGGAATCGAAAGGGATACTGTTTTAAAAATCCAGAGAATGTTGCATGAACATAATCGCCTTATCAATACTTTCAAAACAGCACTAGAAAGAATGCCGGGAGAGGATTATAGGTTGGTGATGCACCCCGATCGCACACCAAGTGGGGAACATGAAAGGCGGTATAATGCACCGTTAATAAATGAAGTCGCAGCCTTGGTTACAGGCGAACAGTTTGCTTTCCGTGATATAGTTTTACAGGCCCGAGATGACACATTAACCAGGGTGCCTGATACTCATAAATTTTATGATGCGTTGCAATATCCGATCATATTTAGTAAGGGACAAGAGGGGTACCACTTTCAAGTTCCTCAAATTAATCCTGTAACAGGTCTTCCCTTGCATAACAAAAAGGTTTCATGCATGGATTTTTATGCCTACAACATGATGATACGAGAAAACAACTTTAACATTGTACAAAGATGCAAGCAACTGGCCAATCAGTCTTACGTTGACATGTACGTTAAAGTTGAAAGCGAGAGGTTACGGTACATATCATTAAATCAAACTAAACTAAGAGCAGAGAATTACATCCATCTTCAAGACGCTGTGGCAAATGACGCTAATTTAAATCCAAATAACTTAGGTCGTATGGTCATTTTACCATCTTCATTTGTAAATAGCCCGCGGTACTTACACGAATATACTCAGGACGCGTTTGTTTATGTGCGTACACATGGTCGCCCTGACTTATTCGTCACCTTTACTTGCAACCCAGCCTGGCCCGAAATAGTCAATCAGTTGATGCCGGGGCAAAGCGCAATAGATAGACATGATGTAGTCGCAAGAGTTTTGAGACTAAAAGTTAAAAAACTAATGGATGTGATTAATAAAGGCCGAGTGTTCAGAGAAGCGCGCTGCTTTATGTACTCTGTCGAATGGCAGAAACGTGGACTGCCACATGTCCATATATTATTGTGGTTAAAAGATAAGTTACGACCCGATCAAATAGATAACATAATCAGCGCTGAAATACCGGATCCTAACATTGACAAGACTCTCCATGACATTATTGTAAAAAATATGATTCACGGTCCATGCGGACCCGAAAATCCACAGTGCCACTGCATGAAAGACGGAAAATGCACAAAAAAATTTCCTCGCAAGTTAGTGAAAGAGACCGTTCACAACGACCACGGATACCCGCAGTATCGTAGAAGAGCGCCAGCAGACGGAGGTCGAACAGCAACCGTGAAGCTCCGAAATGGTAGCTACGTTACAGTTGATAATAGTTGGGTAGTCCCCTATTCACCAATTTTATCAAAAATGTTTAACGCCCACATAAATGTTGAGGCATGCAGTTCAGTACGCGCCATCAAATATATTTGCAAATATATAAACAAGGGTAGTGATCAAGCTATTTTCAATTTTAGAAATACTGATCTTGCGAATCCCGTAGATGAGGTACAAACTTATCAGTCTGGTCGGTATGTCAGCAGCAACGAAGCCGTGTGGCGTCTGTTAGCATTTCCGTTGCACGAAAGGCATCCCACCGTGACACATCTCAGCGTGCATTTAGAAAATGGTGAACGCGTTTATTTTAATGAACACAATTTCCACGAACGAATAACTACTCCGCCAAAAACCACACTCACTGCTTTTTTTGATCTTTGTATCAGAGATGAGTTTGCAAAAACTCTTCTTTATGTCGAGGTGCCGAGGTATTATACTTGGGATGCAAGTAGGAAAACTTGGAAACGCCGCATTCAAGGTACTTCAGTTCACGATTGGCCTGGCGTCAAATCTGGAGATGCTTTAGGACGAGTTTATACAGTTCATGTTAGTAACATGGAATGTTTTTGTCTACGCATGCTTTTACACCATGTGCGCGGACCTACCTCTTTCAATGATCTAAAAAAATACAACACACAAGATTATCCTACATTTCGAGAGGCATGTGAGGCAAGAGGATTACTGGAGAATGACAACCATTGGGATGTGACACTGGAAGAAGCTGCTCAATGTAGATCAGCAGGCAAGATGAGAGAGCTATTTGCTGTATTAGTAGCGACATGTGGTCTTTCAAATTCTCAACAATTGTGGGATAAATACAAAAATGATATGACCGACGATATATTGCACAGATTACAAGAGCAAAATCCCAATGTCACGTACAGTGATTTAATTTACAATGAGGGTCTGACAAAAATTGAAAACCAGGTTAAAACAATTTCTAGAAAGGATTTATCAGATTATGGAATGATCAGACCACAGAGAACCGAGGAAATCAGTAGCGATTTAATACGGGAACTAGATTACGATACTGCTTCCTTACAACAACAATTGACAGAGTCTGTTCCACGTTTGATCCCAGAACAAAGGTTAGTATTTGACAATGTTTTCAAAAAAATCGAAGATGGCGAAGGTGGTTTGTTATTTTTGGATGCTCCCGGAGGCACGGGAAAAACCTTTCTTTTAAACTTGCTTTTAGCGCAAATCCGAAAAGATAAAGGAATTGCTGTAGCAGTTGCCTCTTCCGGAATAGCCGCCACTCTGCTCAATGGTGGTCGAACGGCACATTCGGTGCTTAAACTGTCATTAAACTTAGCCCATGAAGAAATGCCAGTCTGTAATATAAGTAAAAACAGCGAGCGTGGACGTATGTTGCAGCAATGTAAATTATTAGTTTGGGATGAGTGTACTATGTCCCATAAAAGAGCAATTGAAGCTCTAGATCGGACTTTGAAAGACATCAAGAGTAATCCAAATATCATGGGGGGGGATGGTGGTACTTTTAGCGGGCGATTTTAG

Protein

MSSTESESVSNAEYESLSQKIIVEVQKRPALYDTTLRQYSDRNVKNKLWEEVYHNVVNNWMTLSEAEKKKKGSTIQKKWKNMRDSFSKELYSVVVKVAVRCRLRPVRPWMLNATHLRAAETVEQTQTRRVLDAERHAQLIAAETDEDSQRRRLLNAERQAERRRTFSMSTWEAFNGAAFEYDPLIDYVNHRLVIIGRMDKKCRYCGALKWKEETPGMCCSGGKVKIPLLGEPEEPLKSLLLYDSNESRRFLSRIRKYNSCFQMTSFGVDKEVVMPGFSPTFTIQGQVYHRIGSLLPANNEQPKLLQLYFMGDEKNEADRRCQNIQGIERDTVLKIQRMLHEHNRLINTFKTALERMPGEDYRLVMHPDRTPSGEHERRYNAPLINEVAALVTGEQFAFRDIVLQARDDTLTRVPDTHKFYDALQYPIIFSKGQEGYHFQVPQINPVTGLPLHNKKVSCMDFYAYNMMIRENNFNIVQRCKQLANQSYVDMYVKVESERLRYISLNQTKLRAENYIHLQDAVANDANLNPNNLGRMVILPSSFVNSPRYLHEYTQDAFVYVRTHGRPDLFVTFTCNPAWPEIVNQLMPGQSAIDRHDVVARVLRLKVKKLMDVINKGRVFREARCFMYSVEWQKRGLPHVHILLWLKDKLRPDQIDNIISAEIPDPNIDKTLHDIIVKNMIHGPCGPENPQCHCMKDGKCTKKFPRKLVKETVHNDHGYPQYRRRAPADGGRTATVKLRNGSYVTVDNSWVVPYSPILSKMFNAHINVEACSSVRAIKYICKYINKGSDQAIFNFRNTDLANPVDEVQTYQSGRYVSSNEAVWRLLAFPLHERHPTVTHLSVHLENGERVYFNEHNFHERITTPPKTTLTAFFDLCIRDEFAKTLLYVEVPRYYTWDASRKTWKRRIQGTSVHDWPGVKSGDALGRVYTVHVSNMECFCLRMLLHHVRGPTSFNDLKKYNTQDYPTFREACEARGLLENDNHWDVTLEEAAQCRSAGKMRELFAVLVATCGLSNSQQLWDKYKNDMTDDILHRLQEQNPNVTYSDLIYNEGLTKIENQVKTISRKDLSDYGMIRPQRTEEISSDLIRELDYDTASLQQQLTESVPRLIPEQRLVFDNVFKKIEDGEGGLLFLDAPGGTGKTFLLNLLLAQIRKDKGIAVAVASSGIAATLLNGGRTAHSVLKLSLNLAHEEMPVCNISKNSERGRMLQQCKLLVWDECTMSHKRAIEALDRTLKDIKSNPNIMGGDGGTFSGRF

Catalytic Activity

ATP + H2O = ADP + H(+) + phosphate

Cofactor

Mg(2+)

Similarity

Belongs to the helicase family.

Feature

chain  ATP-dependent DNA helicase

Uniprot

A0A267GN76   A0A267GEW9   A0A267F4D8   A0A267GWL2   A0A0D6L4E4   A0A016W7D9   + More
A0A267F5E2   A0A0C2G6C2   A0A267F2R0   A0A1S3DI71   F4ZH17   A0A267FMY4   A0A0C2CWG5   E2AZ86   X1WX02   J9LB24   A0A368GX53   X1X109   A0A267F6F6   X1WRV4   A0A267EIS0   A0A267G464   A0A267ELF5   A0A267GG99   A0A267ETE1   A0A267DCD1   A0A1I8JBS8   A0A2H1W9S9   A0A267H554   A0A267ESS5   A0A2Z6RD64   A0A2H5SHM7   A0A2H5R2Y1   A0A015II56   A0A369KA40   A0A1R3JQ70   A0A2H5T4Y4   A8NPE0   A0A2H5U831   A0A2N9E605   A0A1R3GLH3   A0A397KYL5   Q5NAA4   Q0JP44   A0A0C2WEL5   A0A1Q3ENJ5   A0A267E9Q5   A0A267EKI4   Q7G4T8   Q8LML8   A0A0D2ZUX3   Q0IYM1   Q7XG88   Q8H878   A0A146IJN4   A0A369K0A0   A0A2N9I2F9   A0A2N9IBN4   A0A1D6IHV6   A0A1D6JV61   A0A1D6JX28   A0A3L6DGF1   A0A3L6FXZ4   A0A1D6IDS8   A0A317Y9Z1   A0A3L6E0C9   A0A1D6QRU3   A0A1D6P1V6   A0A3L6DAD7  

EC Number

3.6.4.12

Pubmed

25730766    21470650    20798317    26392545    20547848    12447438    + More
16381971    12791992    24916971    30061735    19965430   

EMBL

NIVC01000229    PAA87485.1    NIVC01000366    PAA84583.1    NIVC01001445    PAA67902.1    + More
NIVC01000111    PAA90396.1    KE126587    EPB66060.1    JARK01000714    EYC35207.1    NIVC01001359    PAA68995.1    KN743176    KIH52626.1    NIVC01001486    PAA67379.1    HQ009558    AEE09607.1    NIVC01000900    PAA75136.1    KN739487    KIH54222.1    GL444143    EFN61253.1    ABLF02041819    ABLF02018127    JOJR01000041    RCN48933.1    ABLF02020814    ABLF02049665    NIVC01001383    PAA68602.1    ABLF02017703    ABLF02041883    NIVC01002034    PAA61410.1    NIVC01000566    PAA80831.1    NIVC01001945    PAA62370.1    NIVC01000381    PAA84309.1    NIVC01001722    PAA64736.1    NIVC01004666    PAA46875.1    ODYU01007113    SOQ49602.1    NIVC01000042    PAA92669.1    NIVC01002018    NIVC01001743    NIVC01000051    PAA61561.1    PAA64516.1    PAA92464.1    BEXD01001738    GBB95559.1    BDIQ01000091    GBC29771.1    BDIQ01000010    GBC12419.1    JEMT01027503    EXX56857.1    LUEZ02000010    RDB29535.1    AWUE01015533    OMO96975.1    BDIQ01000117    GBC37632.1    AACS02000012    EAU86521.2    BDIQ01000188    GBC51003.1    OIVN01000105    SPC74366.1    AWWV01014072    OMO58887.1    KZ866277    RIA04643.1    AP003196    BAD81603.1    AP008207    BAF04484.1    KN818726    KIL54493.1    BDGU01000723    GAW08762.1    NIVC01002407    PAA58126.1    NIVC01002028    PAA61494.1    DP000086    AAP52492.2    AC105746    AAM92800.1    AP008216    BAF26194.2    AAP52578.2    AC104322    AAN09850.1    DF849855    GAT59324.1    LUEZ02000013    RDB28029.1    OIVN01004665    SPD18618.1    OIVN01005182    SPD21271.1    CM007650    ONM59070.1    CM007647    ONL95700.1    ONL96266.1    NCVQ01000010    PWZ07722.1    NCVQ01000003    PWZ39636.1    ONM57938.1    NCVQ01000001    PWZ54641.1    NCVQ01000008    PWZ14360.1    CM000780    AQK60210.1    CM000785    AQL04010.1    PWZ05017.1   

Proteomes

UP000215902    UP000024635    UP000079169    UP000000311    UP000007819    UP000252519    + More
UP000095280    UP000247702    UP000236242    UP000022910    UP000076154    UP000187203    UP000001861    UP000188268    UP000054549    UP000188533    UP000032141    UP000007305    UP000251960   

Pfam

PF05970   PIF1        + More
PF14214   Helitron_like_N
PF02689   Herpes_Helicase
PF12854   PPR_1
PF13041   PPR_2
PF13812   PPR_3
PF00258   Flavodoxin_1
PF02902   Peptidase_C48
PF03399   SAC3_GANP
PF09425   CCT_2

Interpro

IPR027417   P-loop_NTPase        + More
IPR010285   DNA_helicase_pif1-like       
IPR025476   Helitron_helicase-like       
IPR038765   Papain-like_cys_pep_sf       
IPR003653   Peptidase_C48_C       
IPR003840   DNA_helicase       
IPR003323   OTU_dom       
IPR011990   TPR-like_helical_dom_sf       
IPR002885   Pentatricopeptide_repeat       
IPR013955   Rep_factor-A_C       
IPR012340   NA-bd_OB-fold       
IPR008254   Flavodoxin/NO_synth       
IPR005062   SAC3/GANP/THP3       
IPR018467   CCT_CS       
IPR029039   Flavoprotein-like_sf       

SUPFAM

SSF52540   SSF52540        + More
SSF54001   SSF54001       
SSF50249   SSF50249       
SSF52218   SSF52218       

Gene 3D

1.25.40.10     3.40.50.360    

CDD

cd04476  RPA1_DBD_C

ProteinModelPortal

A0A267GN76   A0A267GEW9   A0A267F4D8   A0A267GWL2   A0A0D6L4E4   A0A016W7D9   + More
A0A267F5E2   A0A0C2G6C2   A0A267F2R0   A0A1S3DI71   F4ZH17   A0A267FMY4   A0A0C2CWG5   E2AZ86   X1WX02   J9LB24   A0A368GX53   X1X109   A0A267F6F6   X1WRV4   A0A267EIS0   A0A267G464   A0A267ELF5   A0A267GG99   A0A267ETE1   A0A267DCD1   A0A1I8JBS8   A0A2H1W9S9   A0A267H554   A0A267ESS5   A0A2Z6RD64   A0A2H5SHM7   A0A2H5R2Y1   A0A015II56   A0A369KA40   A0A1R3JQ70   A0A2H5T4Y4   A8NPE0   A0A2H5U831   A0A2N9E605   A0A1R3GLH3   A0A397KYL5   Q5NAA4   Q0JP44   A0A0C2WEL5   A0A1Q3ENJ5   A0A267E9Q5   A0A267EKI4   Q7G4T8   Q8LML8   A0A0D2ZUX3   Q0IYM1   Q7XG88   Q8H878   A0A146IJN4   A0A369K0A0   A0A2N9I2F9   A0A2N9IBN4   A0A1D6IHV6   A0A1D6JV61   A0A1D6JX28   A0A3L6DGF1   A0A3L6FXZ4   A0A1D6IDS8   A0A317Y9Z1   A0A3L6E0C9   A0A1D6QRU3   A0A1D6P1V6   A0A3L6DAD7  

KEGG

101741794    no KO assigned | (RefSeq) uncharacterized LOC101741794

GO

GO:0003678   GO:0000723   GO:0006310   GO:0005524   GO:0006281   GO:0008234   GO:0016021   GO:0004386   GO:0005198   GO:0030126   GO:0005488   GO:0003677   GO:0003707   GO:0007169  

Length:

1253

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.5547

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00003

outside

1  -  1253

 

 

Pi

15.553067

Theta

21.766281

Tajima's D

-1.553393

CLR

0

CSRT

0.0533473326333683

Interpretation

Uncertain