Gene
KWMTBOMO00446
Annotation
reverse_transcriptase_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 3.867
Sequence
CDS
ATGGGTATCAACGAGAACAAAGATAATACTGCTATTGCCCAAGCGCAAGTTGTCACTGGACATCTCGATAATAACATCAACAATTTTGGACCGCTGCCCGAGGGCGAACGTCGGGGCACGTCTGTAGCTGGCCACGGGCGTGACAGCATGCTAGCCAGTGGCTCCCGGACCACCGGCTGTACAGGAGTCGGGGACGCGGGGGGTAGGAGAAAGTCCTCAAGAGCTACAGCCGAGGCGATAATTAGGAGTAGATCAGCAACGCCAGCTGAGGATGTTTCGCAGGAGACATACGTCACCCAACCTGCGACCACCAAAGCTGGTAAACCAAGAGTGCGCATGAAATGGAGTGAAGATATTAACCTATTTATCATGCGCACATATTTCTACATTACCAAACTAGAAACGGACAAGTCAATGTACTGCAAAAGACTTTATGAACGATTCCGACATCGGTACCCTAGTTTAGACGTATCGTCACAAAGAATAGCAGACCAAAGAAGAGTTACACTAAGAAATAGACTTCTATCAGAACAAACTATTGACAACATTAAAATATCAGTCGCAGAGCAACTTAAACAAGAAGAACAGGACTATTTCAATACATCTAGACATAATGTATCCACCACACAACAACCAACTATGCCAGTCATCTTTGAAAAAGATCCCGCAAACTCCGACTATTATTCAACATCAATCGATATGGTCACAAATCAACAACTTTCAACTACAATAAGACATCAATCATGTGAAGCTTCGACACAAACAAATACGCTCCCAGAGTGGACTACACTTTTACAATCTGCAGAACAAGATAAATCTCTCGAAACAGCTATCACTAACGAACTAGCACAAAAACTTAACACGCAGCTTGAAACAGCACTAATTCAATATTCAGGTACAGACCCTACAGCTCGTCCCAAACTACCTCGATTAAAAGAGAATAAAACTTTATACGACTTAGTTGCAGTTTTTAACAAAGAAATTCTCGGTAAACACTTCACGATTGAATCTGACATCTGTGACATACAGTCACTGGTCTACTGCAGTGCTTTGGTTATTTCTGAGCATTTAGGATATAAAATCAGAAATAATCTACTATCACCCGAAAACCGTACACCTAAATCGCGAAAACCCTGTTGGCAATTTAGAATCGAAAATGATATTAAGAGACTGCGAGCTGAAATAGGTAGATTAACACAATACATTAACAACCATAATAACAGGTCTGATCGATTAATTAAAGCAGTTGAACAAATTTTTAGGAACACAAGAATTCATTCATCATATGAGAATAATAATACCAGGCCAGAAGAATTTTTGGACACATTAAAACAGAAATTAGCACTTAAATCACAGAGACTAAGTAGATATTTAAAGGCCTTACAGCGGAAAGAAGGCAATAAATTATTTATCAATAATGAGAAAAGGTTTTATAAATTACTTAGAAATGAGAGTGTAACTAATAATCAAATGCCCCAACCAGAAGAACTCAAAAACTACTGGTCTGATATCTGGAAAAATCAAGGAAACCATAATGAACAAGCTGAATGGATTAGTAAGGAAGTAAATAAATGGGAAAACATTGAACCGATGGAATTTGTGGAGCTTACAGTAGATGACATACAGGAAGTAACACGAAAAATGAAGAACTGGAAAGCAGCAGGAGTAGATAGCGTACAGAACTTTTGGTATAAAAAATTTTTTATCCTACACGATATAATAGCAAAGACTATCACAGACCTAATCAAAGGACAACAGGAACTCCCTAAATTCATAACAGCAGGAATAACTTATATGCTCCCTAAGAGCGAGCGAAAGGTGGAAGAGGACTGA
Protein
MGINENKDNTAIAQAQVVTGHLDNNINNFGPLPEGERRGTSVAGHGRDSMLASGSRTTGCTGVGDAGGRRKSSRATAEAIIRSRSATPAEDVSQETYVTQPATTKAGKPRVRMKWSEDINLFIMRTYFYITKLETDKSMYCKRLYERFRHRYPSLDVSSQRIADQRRVTLRNRLLSEQTIDNIKISVAEQLKQEEQDYFNTSRHNVSTTQQPTMPVIFEKDPANSDYYSTSIDMVTNQQLSTTIRHQSCEASTQTNTLPEWTTLLQSAEQDKSLETAITNELAQKLNTQLETALIQYSGTDPTARPKLPRLKENKTLYDLVAVFNKEILGKHFTIESDICDIQSLVYCSALVISEHLGYKIRNNLLSPENRTPKSRKPCWQFRIENDIKRLRAEIGRLTQYINNHNNRSDRLIKAVEQIFRNTRIHSSYENNNTRPEEFLDTLKQKLALKSQRLSRYLKALQRKEGNKLFINNEKRFYKLLRNESVTNNQMPQPEELKNYWSDIWKNQGNHNEQAEWISKEVNKWENIEPMEFVELTVDDIQEVTRKMKNWKAAGVDSVQNFWYKKFFILHDIIAKTITDLIKGQQELPKFITAGITYMLPKSERKVEED
Summary
Uniprot
EMBL
L08889
AAA92147.1
GAMC01018219
JAB88336.1
GEZM01018924
JAV89960.1
+ More
GAMC01018221 JAB88334.1 ODYU01006945 SOQ49255.1 GAMC01016897 JAB89658.1 GEZM01018922 JAV89961.1 KZ150118 PZC73245.1 AFYH01106869 KQ972532 KXZ75876.1 AB097127 BAC82595.1 KZ150426 PZC70922.1 DS235750 EEB16295.1 DS235366 EEB15300.1 DS235861 EEB19180.1 EEB15312.1 DS235817 EEB17609.1 DS235060 EEB11140.1 DS235859 EEB19129.1
GAMC01018221 JAB88334.1 ODYU01006945 SOQ49255.1 GAMC01016897 JAB89658.1 GEZM01018922 JAV89961.1 KZ150118 PZC73245.1 AFYH01106869 KQ972532 KXZ75876.1 AB097127 BAC82595.1 KZ150426 PZC70922.1 DS235750 EEB16295.1 DS235366 EEB15300.1 DS235861 EEB19180.1 EEB15312.1 DS235817 EEB17609.1 DS235060 EEB11140.1 DS235859 EEB19129.1
Proteomes
PRIDE
Pfam
PF00078 RVT_1
ProteinModelPortal
Ontologies
GO
Topology
Length:
610
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00235
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00204
outside
1 - 610
Population Genetic Test Statistics
Pi
3.12417
Theta
2.865992
Tajima's D
-1.548385
CLR
0.020923
CSRT
0.0436478176091195
Interpretation
Uncertain
