Silkworm Genome Informatics Database

Gene

KWMTBOMO00429

Annotation

PREDICTED:_neurofilament_medium_polypeptide-like_[Bombyx_mori]

Location

Bomo_Chr1(+):12584932-12587256 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.219

CDS

ATGAGCATGTCCAGCCTGAAAAAGTTATTACCCCAGGAGGGTACCTCTTGCTCTGCGGGAGGAGAATCTCTCCGTGCGGTCGAGAAATCGGCCGCACGCTGCCCCTCGTATTCTGGGGGGGGCACAAGCTGTTCCGGGAAAGAGTCCGAGAAGGACGGGGAGAAAAGGAAGAGGTCCACAAGGGACGAAAGAGAAACGGTGCAAAACGAAGACCGCAGGAGAGAAAGCAGCGTTTGCTCGGAGGACAGCATGGTGGTCAGCTCCTGCTGTTCATCACCAAAGAGAACGACGCGCAAAAGGGCAAAAGGCTCGAAGAACGCAAGCTCCGACAGCAGTACCGAATCGGAGGCGTCTAGGTCAGGATCGTTGGTGTCCAGGACCAGACCATCGAAGAGAGGCCGAGGTCGTCCTCCAACGACCGGCCAATACGTGGGATTGGCGGCGGCGAAGCAGGCACACTTAAAAGCTCAACGTGAAGAGCTGGAGCTTCGCGCTGAACAGGAGGTAGTGGAAAGCGTGCACAACCTGCGTGAGAAGAGGCGCGCAGTACATTTAATATCCGGGAACATAACAACAGATCCCGCGACTAGGCTCCAGGAGACCGCCCAGATGGCCCTTACCATCGCGGCGAAAGCGCGCAATCCGAAGGGGACGTACATCAAAGCCCTTAAGGAGATGGCCACAACAATAAAGGAGGCCACGGAAGATCTAGCTTCCAGATCGGCCAACGAGGAAACCCTGAGGCTGCAGGCACTCAGCGAGAGACAGGAGGCGGAGATCCTGCAGCTCAGGAAGGAAGTAGAGGACGTAAGAGCGGAAATGGTGCGCCTCGCTCAGACGACAGCGCAGCCCACTCCCGCCCCAACACTGCCAAACGAAGACGACGAGCGACGCCTGCAGATAATCATGCGAGCAGTCGGGTCCATGCTGGACGCCCGACTCGCGGGTCTGGAGGCCCGTCTACTCCCAGAGCCTCGCTTGCGACCACCTTTGGCCGCTGACGCAAGAAGGAGGAGCAGAGAGAGCGAAATCGATCCAGACACTGCAGGTCTTGTGTCGGAGGCAACGCCGCCTTATGCGGCTTTGCCCCAGCTTGAGACCAACAAGAAAGTGAAGCCCAAGAAACAGAAGGGCAATAACAAGAAGACGACGCCGTCAGCTCCACCCGAGCCGCGCGCATTCCCTCCGGCCCCCGCTGCCCTTACGGTCAGTTGGGCGACCGTTGCGCGTAGAGGAGCACGGCCGAGAAGGGAAAAGGAGCCAGCACCGACGACCAACGCGGAAGGCCAACGAGACAGAAACCCTGCCCCGCTCAAGCCTAAGAAGAAAGGTAGAAAGAAGAGACTTCGAGCTCCGAACTCGCAGGCCGTTATTCTGAGGCTGCACCTGGAGGCCATCGAAAAGGGGCTCTCCTACCGGGAGGTGCTCGCCGAGGCGAGGGCCAGCATCGACGCCGGAGCCTTAGGGATCCCCATTAAGAAGGTCCGGTCAGCAATAACCGGAGCCAAAATACTCATAGTGAGCGGCGAGGACCAGATCGCGAAGGCCGACTTGCTGGCCGAGAAGCTTAAGGAGGTTCTCTCTTCTAAGAGAGTAACGGTGACAAGACCGATAGTGACCGCTGCAATCCGCATAAGCGGACTTGACGATTCGCTGACGGAGGAGGAGATATGCACTGAGCTTGCGCGCATCGGCGAATGCTCCGTCGATGCAGTCAAGGCTGGCTCTATCAAGCCCGGATCCGGAGGAATGGGCCAGGTTCTCGTTCGTTGCCCGATAGCAGCGGCGAAGAAAATTGTTACAGTGACGAAGCTGCGCATCGGGTGGAGCGTTGTTCGCGTCCACCTGCTGGAGGCCCGGAGGCTACAATGCTTCCGCTGCCACGCGTTGGGCCATGTGGGTGCGCGGTGCCCGTCGTCGGTCGACCGCAGCCACGACTGCTACCGGTGCGGACAGACCGGCCACGTGGCATCCGGATGCACACTGGCACCGCGATGCGCCGTCTGCGCCTCCGCCGGGAAACCAGCGGACCACACTTCGGGGGGCAAGGCCTGTGCAAGGCCCCCGAGAAAACCAAGGAGAGAGGACGTCGCTGCACCCGCGGCCGCACCCGTTGCTGCAGACCGAAGTCAACTCGGCGAGACGACGACTCCGATGGACGTCCAGCCTCCGTCGGGCACAAGGAAGACCGGGGCTTTATGA

Protein

MSMSSLKKLLPQEGTSCSAGGESLRAVEKSAARCPSYSGGGTSCSGKESEKDGEKRKRSTRDERETVQNEDRRRESSVCSEDSMVVSSCCSSPKRTTRKRAKGSKNASSDSSTESEASRSGSLVSRTRPSKRGRGRPPTTGQYVGLAAAKQAHLKAQREELELRAEQEVVESVHNLREKRRAVHLISGNITTDPATRLQETAQMALTIAAKARNPKGTYIKALKEMATTIKEATEDLASRSANEETLRLQALSERQEAEILQLRKEVEDVRAEMVRLAQTTAQPTPAPTLPNEDDERRLQIIMRAVGSMLDARLAGLEARLLPEPRLRPPLAADARRRSRESEIDPDTAGLVSEATPPYAALPQLETNKKVKPKKQKGNNKKTTPSAPPEPRAFPPAPAALTVSWATVARRGARPRREKEPAPTTNAEGQRDRNPAPLKPKKKGRKKRLRAPNSQAVILRLHLEAIEKGLSYREVLAEARASIDAGALGIPIKKVRSAITGAKILIVSGEDQIAKADLLAEKLKEVLSSKRVTVTRPIVTAAIRISGLDDSLTEEEICTELARIGECSVDAVKAGSIKPGSGGMGQVLVRCPIAAAKKIVTVTKLRIGWSVVRVHLLEARRLQCFRCHALGHVGARCPSSVDRSHDCYRCGQTGHVASGCTLAPRCAVCASAGKPADHTSGGKACARPPRKPRREDVAAPAAAPVAADRSQLGETTTPMDVQPPSGTRKTGAL

Uniprot

NA

ProteinModelPortal

NA

KEGG

105842334 no KO assigned | (RefSeq) neurofilament medium polypeptide-like

GO

GO:0003676 GO:0008270 GO:0030117 GO:0005198 GO:0030126 GO:0005488 GO:0003677 GO:0003707 GO:0007169 GO:0016021

Length:

733

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.000890000000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00005

outside

1 - 733

Pi

0.100392

Theta

0.577749

Tajima's D

-1.831133

CLR

0.011063

CSRT

0

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree