SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00424
Pre Gene Modal
BGIBMGA000739
Annotation
PREDICTED:_sulfated_surface_glycoprotein_185-like_[Papilio_machaon]
Location in the cell
Mitochondrial   Reliability : 1.029 Nuclear   Reliability : 1.491 PlasmaMembrane   Reliability : 1.074
 

Sequence

CDS
ATGGACCCTTTGAAATTCAGAACAAATGAGAACATTGGAAACACTGAGAACCCTTGCAACCCATTGTATTGGTACCCGAAGAACTTACCCGACTACTGCTACGAAAAACCCTTCATAAAGACTACGAATAATACCAATTTCATACCTTTACCTGTTCCTGTACCTATTTCACAATCGATACAGATCCCCCAAACTGTACCAGTACCTTATGGACTGCCTCTCCCGTTTGGGGTACCCTTAGCGCCAATGGGTCCAATGTTGCCTGTACCTATACAACCATCTCCTTACAGTTTTCCTCGTCGACAAATCGGTATGGTACCAGGCCTTCCTGGTATTGTGTCTCCAGATGGCGGTCTTAATATACTTCCATTCTCAGACGTGTATTCGGATGTTTTGGCAAAACATAAGCAGAAGATGATAAAGAAACGCCTAGAGAGGGTGTTGGAAGAATATGACGACCCTCCTTGGTCATATAGAAGTAGGAATCGAGTACGAAAGATTTTTTACGATTAA
Protein
MDPLKFRTNENIGNTENPCNPLYWYPKNLPDYCYEKPFIKTTNNTNFIPLPVPVPISQSIQIPQTVPVPYGLPLPFGVPLAPMGPMLPVPIQPSPYSFPRRQIGMVPGLPGIVSPDGGLNILPFSDVYSDVLAKHKQKMIKKRLERVLEEYDDPPWSYRSRNRVRKIFYD

Summary

Ontologies

GO

Topology

Length:
170
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.15199
Exp number, first 60 AAs:
0.00252
Total prob of N-in:
0.18803
outside
1  -  170
 
 

Population Genetic Test Statistics

Pi
24.085461
Theta
13.936084
Tajima's D
1.714381
CLR
0.007754
CSRT
0.838658067096645
Interpretation
Uncertain
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