Silkworm Genome Informatics Database

Gene

KWMTBOMO00409

Pre Gene Modal

BGIBMGA000493

Annotation

PREDICTED:_uncharacterized_protein_LOC106130550_[Amyelois_transitella]

Location

Bomo_Chr1(-):11977060-11982992 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.007

CDS

ATGCTGCATTCCTCAATAATGTTATTACTGCTGTGCGTCAGTATCAGTACCTCGGCACCTGCGGACTCTCCCATTCGAGTCGACTTGCCAGTATTTGACCAGCCTCAGACAAACTTTGATATCCAACCGAATACGGTTATAGAAGCAGAGAATTACCCAGGTGGAGAACCTGACACAAATTCCGGGAATTTTATTTCGAACAAATTACAATCTTCTACAAAGTTCATCAGCAACAAAATTGAGACTCAAGTAAAGGCTTTGAATTTCGGAGGACCCTTTGCTTCTCGAACATCCACACTCGAGAGCGCCGTGCCAGAAACGGAAGGTTTTGGAAGTAAAACTTTATCAGTGAAAGAAAACATACAAAACGTTGTGGCCGGAATATTTCAACCTAAGCCCATAGTAGACACAATCAGCGAATCAGAAAAATACGGCAACACTGGAGACAAATTCTACAGCGCGGGCAAAGTCATCGTAGGTGGTGCTGAAGGAGTGTCCAATGTAGTCAACTCAGTTCTTGAGATTCCAGGGACCTTCATCAGAACAATTACCAGAGCTGCCACCGAGAAACTAAACAACCTGGGTGGAAAGCTAATTGGTTTATAA

Protein

MLHSSIMLLLLCVSISTSAPADSPIRVDLPVFDQPQTNFDIQPNTVIEAENYPGGEPDTNSGNFISNKLQSSTKFISNKIETQVKALNFGGPFASRTSTLESAVPETEGFGSKTLSVKENIQNVVAGIFQPKPIVDTISESEKYGNTGDKFYSAGKVIVGGAEGVSNVVNSVLEIPGTFIRTITRAATEKLNNLGGKLIGL

Uniprot

H9ITB3 A0A2A4JV29 A0A2H1V450 A0A194QLF4 I4DP78 A0A194PFX5 + More
A0A212F9P5 A0A0L7LQA7 A0A1I8N806 A0A026W6B9 U4USR0 Q16TV7 A0A088AV63 A0A1S4FPI1 A0A0M8ZU05

Pubmed

19121390 26354079 22651552 22118469 26227816 25315136 + More
24508170 30249741 23537049 17510324

EMBL

BABH01007234 NWSH01000563 PCG75626.1 ODYU01000580 SOQ35613.1 KQ461196 + More
KPJ06367.1 AK403459 BAM19718.1 KQ459605 KPI91933.1 AGBW02009564 OWR50454.1 JTDY01000340 KOB77627.1 KK107453 QOIP01000004 EZA50589.1 RLU24164.1 KB632433 ERL95558.1 CH477638 EAT37971.1 KQ435850 KOX70917.1

Proteomes

UP000005204 UP000218220 UP000053240 UP000053268 UP000007151 UP000037510 + More
UP000095301 UP000053097 UP000279307 UP000030742 UP000008820 UP000005203 UP000053105

PRIDE

H9ITB3

Pfam

PF03943 TAP_C

Interpro

IPR005637   TAP_C_dom        + More
IPR032675   LRR_dom_sf
IPR032710   NTF2-like_dom_sf
IPR018222   Nuclear_transport_factor_2_euk
IPR009060   UBA-like_sf
IPR030217   NXF_fam

SUPFAM

SSF54427 SSF54427 + More
SSF46934 SSF46934

Gene 3D

3.80.10.10

CDD

cd14342 UBA_TAP-C

ProteinModelPortal

H9ITB3 A0A2A4JV29 A0A2H1V450 A0A194QLF4 I4DP78 A0A194PFX5 + More
A0A212F9P5 A0A0L7LQA7 A0A1I8N806 A0A026W6B9 U4USR0 Q16TV7 A0A088AV63 A0A1S4FPI1 A0A0M8ZU05

KEGG

101736369 no KO assigned | (RefSeq) uncharacterized LOC101736369

GO

GO:0016021 GO:0005634 GO:0051028

PANTHER

PTHR10662

SignalP

Position: 1 - 21, Likelihood: 0.995338

Length:

201

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05111

Exp number, first 60 AAs:

0.04036

Total prob of N-in:

0.01007

outside

1 - 201

Pi

21.818456

Theta

24.662131

Tajima's D

-0.701741

CLR

0

CSRT

0.194940252987351

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics