Gene
KWMTBOMO00408
Pre Gene Modal
BGIBMGA000731
Annotation
PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_35_[Bombyx_mori]
Location in the cell
Nuclear Reliability : 2.935
Sequence
CDS
ATGGCGGTTAAAAAACGTGAACTCGTTCAAGACAACTGCCAGCTGGATTTGAAAGCGCTGGCGCAGTACATCCAGATGATGAATGATCAACCCAACTACCTCCCGCAAGCCCTGGACTTGATTAAGAACTGTCAAGATATTGTTAAATGCCTCACTCTTGCTACGGGAAACGAATGGAATCTACTGCAGTCAATTGAAGAGTTCTTTTTGCGCGTTGTTAACCACGTCCATTGCACTTTGCGTCACGAAATCGTAACAGCCGTACTCGACAAACTGTATTCGTTTATATCGGACCCGAAAAGCCACATTGGACCTCAGACGTCTGTCGTGTTAGTTGTGCTCGATGGCTTAGACGACGCGGCCACAATGTCGAACGCACGTTGGCTGGTCCAACAAGGCGAATCCGGACCGGACGGCGCTGGATTGAGGGCTGCTCTATCAGTCCTCTATTGTTGGATGCACAGCTGGCAAGGAACACCTTTGCTCGGCGACTGGGTCATGGCGTACATAAAAGCTTTGGAGGAAAATGAAAAATTCGAAATATTACTTGATGTCTCTCTCGAGAACCTAGAGAAGTTATTCTTGGCTTTGGGTGAACCCGGAACTTTACGGACTTCGGAGGCGGACGTTGTCATTCACATCTTGGCGTCGTTACGAGAACAGCAAGAGGCTCTTGATAAGATCGCCACGAACGTCAGGAAGGTGCTCGGGAATCTGGCCGCGGACAGTCGACAAAGCAGCCGGCAACACTTACAGAACGTCGTCGATATAGTCAATGCTATGGTCGACTACAAAATGGAACCACTCAAAGGAGAGCCATTGGAAACCTTCAAGGACAAATACGAGGATTTGATTTCATGCTTGGAATATCACATGGCATCCCGATGGTCTCGGTTTAAGCATCTCCCGCCATGGAGGCCTCGGGGACTCCCCGCATCGCCTCCGAATTCGAAGCAAGCGCCGGCTAGGAAAGTTGGCCTCCTGAATTTGGGCAACACGTGTTACATGAACAGCGTCATGCAAGCCCTGCTCGTTACCAGACACTTCAGCACACACGTTATGATGAAAATGAACGCCGTACCGTACTGGTCGAAGATGGGGATACTGTTCGCCAAAATGATGCACTCCTACAACACGAAGCTGAATCCTGACGAATTCTTCAATGTCGTGAAGCCTCCGTTCTTCACAGTTAATAACCAACACGATAGCTCTGAGTTTTTAGGGTATTTGTTCGTGCTCCTCCAGTCCTACGAACACTGTTCGGACGTGAACTTTGATTATTCTCGGCAAGCTGTCATGACCGCCGGCACACGGCAGACCAGATCATCTCACGCGTCACAAGCCTCGCACGCCGTGCAACCGACACAAGGGGCCGGCGACGACGCAGGGTCCAGTAATCGAGGATCCCTGTCTCCGAGACCTGGCAGCAGTGTGTCGCGACCGGGTGGCAGTTCTTCGAGAGCTGGTGGCAGTGGGGCACGCGCAGGTAGCAGCCATTCGAGGCCTAGCAGTTCTTCTGGCTCCGGCAACAGCAAAGCAACGTCCTTGGACGTGGACTCAATGATGCCGCCGAAAAAACGGATGCGGCATTTGTTCGATACAACGTTCTTACGGCGAGATTCGATTATAGATACAATGTTCGGTGGGGTTTTGTTGACGCGCGTCGAATGCACCGATTGTCATTCTTCGTCGCTTTCCCGTGACGTGTTCCGGGACCTCCAACTCGCGTTTCCCGATAAGCCCGAAGCGTCACAGCACAGCGTCCAGAGCCTTCTAGAATATTACTGCTCGAAAGAGAGCCTCTCGGGCGATAACAAGTATCAGTGCCGTGACTGCGGAGGCCTACGTGACGCCGAAAGGAGCGTCTTAATCGAAACCTCGCCGAAATATCTAATACTCGTTTTGAAGAATTTCAAGTTCGAGCCAAAGATTCAGGTTCAGACGAAGCTGATGCACTCTATGTACCATAACCAGTCGGTGACTCTGCCGACTGTCCGGGCCCGTGGTCAGCACTCTGCGTACTCGCTATACGCGGCGATCATCCACGCCGGCACCACGCTCGACTCCGGTCACTACTACACCCTAGCTAAAGACAACGACCAATGGCACATATACAACGACGACATCGTCACAAATGCCGACGAATCGGAGTTCAGCAAGCTACATCCGAACAGCACTCCGTATATACTGTTCTACAGGAGATCAGACATGGAGGAGAGTTCGGCTCCGACTCTCGAGGAGTTGCCTCCTAAACTGCAGGAGTGCGTGATGGCCCACAACAAGCACTACATGGAGAAAGTGCGGGCGATACATTTGTCGCGTCCATGA
Protein
MAVKKRELVQDNCQLDLKALAQYIQMMNDQPNYLPQALDLIKNCQDIVKCLTLATGNEWNLLQSIEEFFLRVVNHVHCTLRHEIVTAVLDKLYSFISDPKSHIGPQTSVVLVVLDGLDDAATMSNARWLVQQGESGPDGAGLRAALSVLYCWMHSWQGTPLLGDWVMAYIKALEENEKFEILLDVSLENLEKLFLALGEPGTLRTSEADVVIHILASLREQQEALDKIATNVRKVLGNLAADSRQSSRQHLQNVVDIVNAMVDYKMEPLKGEPLETFKDKYEDLISCLEYHMASRWSRFKHLPPWRPRGLPASPPNSKQAPARKVGLLNLGNTCYMNSVMQALLVTRHFSTHVMMKMNAVPYWSKMGILFAKMMHSYNTKLNPDEFFNVVKPPFFTVNNQHDSSEFLGYLFVLLQSYEHCSDVNFDYSRQAVMTAGTRQTRSSHASQASHAVQPTQGAGDDAGSSNRGSLSPRPGSSVSRPGGSSSRAGGSGARAGSSHSRPSSSSGSGNSKATSLDVDSMMPPKKRMRHLFDTTFLRRDSIIDTMFGGVLLTRVECTDCHSSSLSRDVFRDLQLAFPDKPEASQHSVQSLLEYYCSKESLSGDNKYQCRDCGGLRDAERSVLIETSPKYLILVLKNFKFEPKIQVQTKLMHSMYHNQSVTLPTVRARGQHSAYSLYAAIIHAGTTLDSGHYYTLAKDNDQWHIYNDDIVTNADESEFSKLHPNSTPYILFYRRSDMEESSAPTLEELPPKLQECVMAHNKHYMEKVRAIHLSRP
Summary
Similarity
Belongs to the peptidase C19 family.
Uniprot
Pubmed
EMBL
Proteomes
PRIDE
Pfam
PF00443 UCH
Interpro
SUPFAM
SSF54001
SSF54001
ProteinModelPortal
PDB
5TXK
E-value=4.51408e-24,
Score=278
Ontologies
GO
Topology
Length:
775
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.17892
Exp number, first 60 AAs:
0.00013
Total prob of N-in:
0.00657
outside
1 - 775
Population Genetic Test Statistics
Pi
22.745403
Theta
20.147635
Tajima's D
-0.993293
CLR
0.016508
CSRT
0.140142992850357
Interpretation
Uncertain
