SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO00407
Pre Gene Modal
BGIBMGA000494
Annotation
PREDICTED:_uncharacterized_protein_LOC101736416_isoform_X1_[Bombyx_mori]
Location
Bomo_Chr1(-):11930090-11938652      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.438
 

Sequence

CDS
ATGGATGCAGCGGCGTCTTCTAAAATCGATGACGATTTTAACAAACTACTTGATAATTATTTAAAGATTGATACAGACACGTTTTCAACGCGCTCGAAACAAAGAAGATCAGTAATAAAGTACACTAAATTACCAGATTATGATTTCAACTCAAACGTGTCATGGGACAAAGGAACATACTTTCAGCAGCCAAGAGTACGTCGTATTATAACACTTGAAGATGAAGAATCAAAGACAAGTAGGTCGTTGAAGCCGGACACCATATCTGTTCAAACAGGCAGAATGGCAAACAGCAATTCCAAAAGAAAAATTGTAACTATCAGTGAAGATGATGAAAATGATTTTCATCCTAGATTCTTCAAAGATCGCAAATCGAACTCTGTCAAAACATCTAGTCGGTCCGTTGCAACAGATTTTAAAGAAGAAAAGCAGAATTCACAGCGAAGCACGTCGAGATTATCAACATCTACAAAATGTAACAAAGGAACTAAGGCTGGCACCAAAACCACTAATTTATACAATTCTAAGAAATCGAACACGAAAGAAAAACAATCTTTCGATACGACTGAAAGTAATATTAAAATGCGCAATCTCAAAGACAAAGATAACATTTACAATAATCGGAGCACGTATTCGCCCGTTAAAATTAATCTCAGTAAAAACATAGTCGACACGGATGAGAACAGTAAGGAATTAGATATGGCAAAAACGAACATCCGCGACAATCGTAGAGCCGATAGTTCAGCGAGGAGGGTGAAGACTCACACAGGGAAGACGTCCATGCAATCCAACAAAAATAACGTGAAAATATTGAAACAGACGCAAAACAAACCGATAACTATAATTCATGTACCGTTCGAAGAGAAATGCGAAACGCGTCGCAACGAACACAAAAACGTTGCTCCTAAACGAATCCAGAAAACGAACACGATCGATTGCGGTACAGATATGCGGGATTTCGTATATTTTGAGGACGTTCACATCAATACCGAACCCCTCCCGCCCACCGTCGACCGAATGACGGGCATGGACGAATTCGACTGCAGTCCCGTCTACAAAAGCATGCAAAGCACCGACGCACAGACCGAACTAATCAAGGCAACGTTCGACAGTCTTGAAATACCAAACGTCACATTAACTAAAGAACACAACAAGTACCAGCAAAGTGAATCGCTACCAAACATGAAAATTCCGTCTATGAAAACGACGTCCGATCAGGACGACGATTCGTTTGTTCGCAAGACCGGTTCCTATATAATAAGTCGTGCCACTTTAACTTATACAACCAAACAGAAGATCAACATTCAAGTCGTCAGCAGTAGCGACGAAGCCGCCTCTGTACCCTCATCTAGTCCAATGTCTTACCCTATGAACGTTATATCGGTTTTTAAAAATGAAATAAAAAAGAATAGAGACGCAATGAATACATCACAATTTATTACGAATCACAATAATGAAGAAACTAAAGATAATGAAGACGATAAGGAACATAAATGTCGCAACGAAATCAAGTCATTACATTACTCGCACGCCTCCGACACCTACAAGTTGATGAAACCTTCGGAAATAATTAGTTCTATAAAAGTGAACAGTTTGGCGCAGAGCGACTTCATGTGCGAACAGTTCCAGAGGGAATTCAACTTCATTGATTCATTTTTTGAATCCCTACAATATTTAGAAAACTGTTCGTTGTCGAATAAATGTTTGTCGACGAATAAAGTTGAAAATTTGATTAAAAATCCGATTTTATACGATTCCGATTTTGACATCAAGGCCACTGAATATTTAGAATTGTTACCGAAATTCGAAAATGGCACTAGTCTCGAGAATGGCCAAACAATGGCAACGAAGAGCCTTTGTCTGCTCAATTTACTCATACGCGATGAGCAAAGGCGAGCCAGAAATCTCTTGTATGTACTTAAGATGCGTGAAGACGCTCTGAAGGACTTCACAAAATCGCAAATATTATGGCTAGAAAATAAGAAAAAACACGAAAACACTGACGTGTCGACGTTAAAGAAGAAACAGCGCGGCGCTCTTTTAAAATTACAGCACGAATGTGGGGAAATGCATCGTATGCGTAAAGCACTGTTGACGCTTTCGGAAAAACGTAAAGACGCCCTAATCAAGACCAAGAAGAACATTGAACTCAAATTGAAAAACAACGTAGACGTTGAGCATCTAATCGAGAAAAAGAAATTGAAAAGGAACGGTTCAGATAGGAACATCGTTCCGTTGAAGTGCTTCGATTTGTCTAGTAGTGGGTGCGAGGAGACCTTAACCTCTCGGTCCACTTCCGAAATCGCAATCCGCAATACGGACATCGCCAATGTTACGTCTGTTAGCATTAAAAGTGCAGAAAAAAGTATACAAACTGGTGACAGTATTTTAGAAACATTAATGACTGCGCCCACTGACGCCGCCGCGGAGAATTTCGTTGTAGTCGACGGCGGCTACCTTAATATAATTTTCCATAATTTAACATTACCGCAGATCTTCAGTAATGGCAAACAGTACGAGGTGAACGAGGAAGCGTTGAGGAACATAGTAAACTCGTCAAATCAAAATCAGTTAAGCGGCAATGAAGTTGTGAATAATTTAATGGAGCAAATACAAAAAGGTGATATAGAAATGACTAGCACTCCATCCACAGCCCGTAGTCTCGTCGAGGAGTTCGATCAGTATTACAAGAGTTTTGTAGAAGAGGAGATACAACTGAACAGGCCCGAACGAGAATACAAACCCCCAGTTGTTTGCGAAATTGAGGACAAATATGTGCAGGTGTCTCTTCCGAAACTGGCACCTATCGAGCCTCGCAGTTACCAAAGCGCCTCAACAATGACCTGTGACAGCAGTGACGACAATGATGACATACTAGAGAATCTGTGTACTTATGATATGGTTCCAATAAATAAACCAGAATATCCAGAGCTTGAAGAGACGATTCCGCAGACTGGTCCTTTACCTGTCCCTGTAGGCGCTTCATATGTACCGGAACCTCAAACGCTTGATAGCACCTCTTGGTCTCAGATAAATACTTCTCCATCACCTCTTGAACAGTGCAGTAGCAGACAGACATTTGATGATAATATATCAATGTCATCAATGGTGTCACCTGTGCAATATGATAATATATCAATGTCATCCATGGTGTCACCCGTCCAATATGAAGCTGAAGAATTGCGAAGACAGCAGCTAGCTATAGAGAGAGAAATAAAGGCATTAGAACAGGAACAATGCAGGCTGCTGGTTGTACGAGAAATACCAGACAAGCCTCCGCCACCGTATACTCCACCTGCAGATCCACGAATTCCGAAACGACCACGTATGTTCCTCGCTGACGAAAAGACAAACGAAATAATATATGAACATATTAATCACCCTGCAAGTGCCGCAATAGAACCCACCGAACCGTTCGACGTATTCCTCAAAGACTTTTGCGAGGAAACGTGCGAAAGACATAAACAAGTTCAGAGTGATAAGCCATGGGATGCGTGCAATTTATTACCACAAAAACCTCAGATCGTCGGAGATAAATTACTTAAGGAAATTTCTATGGAGTTAACTGAAGTTTTGAGCGGTGTCAAGCCCACCGTAGTCTCAGGTGTAGCAGGTCGCCGTTCTGACCATATTGATGATATATTGTTTGCGGAGTGGCGCCGCTGCGAGCCTGAATGGACTTCGCTACACACAGACGAAGCGACCGTCAAAAATCAAATCTTCGAAAGCATTTTCCAGAGAATCTTAACCGAAACGATAGACGAGTATAAAAAGACTGTGATGTGTGACAGTAAACCTGACCACAATACCTAA
Protein
MDAAASSKIDDDFNKLLDNYLKIDTDTFSTRSKQRRSVIKYTKLPDYDFNSNVSWDKGTYFQQPRVRRIITLEDEESKTSRSLKPDTISVQTGRMANSNSKRKIVTISEDDENDFHPRFFKDRKSNSVKTSSRSVATDFKEEKQNSQRSTSRLSTSTKCNKGTKAGTKTTNLYNSKKSNTKEKQSFDTTESNIKMRNLKDKDNIYNNRSTYSPVKINLSKNIVDTDENSKELDMAKTNIRDNRRADSSARRVKTHTGKTSMQSNKNNVKILKQTQNKPITIIHVPFEEKCETRRNEHKNVAPKRIQKTNTIDCGTDMRDFVYFEDVHINTEPLPPTVDRMTGMDEFDCSPVYKSMQSTDAQTELIKATFDSLEIPNVTLTKEHNKYQQSESLPNMKIPSMKTTSDQDDDSFVRKTGSYIISRATLTYTTKQKINIQVVSSSDEAASVPSSSPMSYPMNVISVFKNEIKKNRDAMNTSQFITNHNNEETKDNEDDKEHKCRNEIKSLHYSHASDTYKLMKPSEIISSIKVNSLAQSDFMCEQFQREFNFIDSFFESLQYLENCSLSNKCLSTNKVENLIKNPILYDSDFDIKATEYLELLPKFENGTSLENGQTMATKSLCLLNLLIRDEQRRARNLLYVLKMREDALKDFTKSQILWLENKKKHENTDVSTLKKKQRGALLKLQHECGEMHRMRKALLTLSEKRKDALIKTKKNIELKLKNNVDVEHLIEKKKLKRNGSDRNIVPLKCFDLSSSGCEETLTSRSTSEIAIRNTDIANVTSVSIKSAEKSIQTGDSILETLMTAPTDAAAENFVVVDGGYLNIIFHNLTLPQIFSNGKQYEVNEEALRNIVNSSNQNQLSGNEVVNNLMEQIQKGDIEMTSTPSTARSLVEEFDQYYKSFVEEEIQLNRPEREYKPPVVCEIEDKYVQVSLPKLAPIEPRSYQSASTMTCDSSDDNDDILENLCTYDMVPINKPEYPELEETIPQTGPLPVPVGASYVPEPQTLDSTSWSQINTSPSPLEQCSSRQTFDDNISMSSMVSPVQYDNISMSSMVSPVQYEAEELRRQQLAIEREIKALEQEQCRLLVVREIPDKPPPPYTPPADPRIPKRPRMFLADEKTNEIIYEHINHPASAAIEPTEPFDVFLKDFCEETCERHKQVQSDKPWDACNLLPQKPQIVGDKLLKEISMELTEVLSGVKPTVVSGVAGRRSDHIDDILFAEWRRCEPEWTSLHTDEATVKNQIFESIFQRILTETIDEYKKTVMCDSKPDHNT

Summary

Uniprot
H9ITB4   A0A2H1V455   A0A2A4JEL9   A0A194PLF3   A0A212F9N9   A0A0L7LAN4   + More
Pubmed
19121390    26354079    22118469    26227816   
EMBL
BABH01007232    ODYU01000580    SOQ35611.1    NWSH01001866    PCG69863.1    KQ459605    + More
KPI91935.1    AGBW02009564    OWR50452.1    JTDY01002034    KOB72271.1   
Proteomes
UP000005204    UP000218220    UP000053268    UP000007151    UP000037510   
PRIDE
H9ITB4   
Interpro
IPR028750   CEP350       
ProteinModelPortal
H9ITB4   A0A2H1V455   A0A2A4JEL9   A0A194PLF3   A0A212F9N9   A0A0L7LAN4   + More

Ontologies

KEGG
101736416    K16768 centrosomal protein CEP350 | (RefSeq) uncharacterized LOC101736416
GO
GO:0005813   GO:0034453   GO:0008017  
PANTHER
PTHR13958  

Topology

Length:
1270
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00039
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00000
outside
1  -  1270
 
 

Population Genetic Test Statistics

Pi
18.151434
Theta
15.831013
Tajima's D
0.570642
CLR
0.147852
CSRT
0.549072546372681
Interpretation
Uncertain
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