Gene

KWMTBOMO00402

Pre Gene Modal

BGIBMGA000497

Annotation

PREDICTED:_achaete-scute_homolog_3_[Bombyx_mori]

Location

Bomo_Chr1(-):11817245-11827852      View in EpiBrowser

Transcription factor

bHLH

Location in the cell

Nuclear   Reliability : 3.257

CDS

ATGTCTGGCGCAAGGACCCAGCTCGCTGATTCATCGACTTCTCCACCATTAAGCGACAGTCGTCGTTTGGACTACTCTGGTCTGAAGTTTTCGTACGTGGATGGTTCGGACGACGAGAGTGCCTCATTGCATTCGGAACTGCCTTCGTGTGTTTACGCCGCGGCCAGGTCGAGGCTCCAGCTCCCCTTGGCCGCATATGTACATCAACACACCCGACAACTTCATCCTGATTCGTTGCTGGAAGCTGCAGCTGAGCCCGACTACCAATGCGGAGGATCGCCTTATCGGGTGCAACGCGCTGCCGCAAATGTACGCGAACGCCGACGGATGCTGAGGTCCGGACCAAATTGCAGTATAAACTCGGCGTTCGATGAGCTGCGTGTTCATGTACCGACGTTCCCGTACGAGAAGAGGCTCAGCAAGATTGATACACTGCGGCTCGCCATCGCATACATCGCTTTGCTTCGGGAGGTTTTGGATGCAGACTACGATCCATTGACGTACGTAGAAAAATGTCTTCGAGGTGAAATAAAGGCAGATCGAGCTCACTGGAATACTAGCGATCTGACCGCTAGACTGTCCTGGATCAACTGGGAGAATCTGGGAGTAAACCCGCAACGGCGCAGTGTCCTGACTTCATTGGCGCTTAGTTCCGATAATTTACAATACGGGCACAACTAG

Protein

MSGARTQLADSSTSPPLSDSRRLDYSGLKFSYVDGSDDESASLHSELPSCVYAAARSRLQLPLAAYVHQHTRQLHPDSLLEAAAEPDYQCGGSPYRVQRAAANVRERRRMLRSGPNCSINSAFDELRVHVPTFPYEKRLSKIDTLRLAIAYIALLREVLDADYDPLTYVEKCLRGEIKADRAHWNTSDLTARLSWINWENLGVNPQRRSVLTSLALSSDNLQYGHN

Uniprot

H9ITB7   A0A2A4JBY5   A0A2W1BDT3   A0A194PF85   A0A194QLX0   A0A212EGH8   + More
A0A2H1WTI0   D6WJF3   A0A154PAH5   A0A151IDZ3   A0A0M9A0K0   A0A2A3ENJ1   A0A087ZNU8   A0A310SEN7   A0A195DKW6   A0A151WI36   Q170U3   A0A182QM83   A0A0L7RAL2   A0A182P7D6   A0A026X2C2   A0A1B0EVA7   A0A1A9W3V2   A0A1J1INY0   E0VXD1   A0A1B6CPI0   A0A336LIQ6   A0A182USI8   A0A0C9QVH6   A0A0M3QX57   A0A2R7WEH4   K7IMP3   A0A226EKE1  

Pubmed

19121390    28756777    26354079    22118469    18362917    19820115    + More
17510324    24508170    30249741    20566863    20075255   

EMBL

BABH01007226    NWSH01002093    PCG69208.1    KZ150310    PZC71467.1    KQ459605    + More
KPI91942.1    KQ461196    KPJ06359.1    AGBW02015069    OWR40593.1    ODYU01010950    SOQ56379.1    KQ971342    EFA03683.2    KQ434857    KZC08817.1    KQ977901    KYM98906.1    KQ435798    KOX73359.1    KZ288204    PBC33287.1    KQ762329    OAD55958.1    KQ980762    KYN13530.1    KQ983097    KYQ47503.1    CH477468    EAT40463.1    AXCN02000044    KQ414618    KOC67952.1    KK107020    QOIP01000004    EZA62465.1    RLU24267.1    AJWK01017726    AJWK01017727    AJWK01017728    AJWK01017729    AJWK01017730    CVRI01000057    CRL01864.1    DS235830    EEB18037.1    GEDC01021960    JAS15338.1    UFQT01000022    SSX18004.1    GBYB01004672    JAG74439.1    CP012526    ALC45353.1    KK854707    PTY18052.1    LNIX01000003    OXA58112.1   

Proteomes

UP000005204    UP000218220    UP000053268    UP000053240    UP000007151    UP000007266    + More
UP000076502    UP000078542    UP000053105    UP000242457    UP000005203    UP000078492    UP000075809    UP000008820    UP000075886    UP000053825    UP000075885    UP000053097    UP000279307    UP000092461    UP000091820    UP000183832    UP000009046    UP000075903    UP000092553    UP000002358    UP000198287   

PRIDE

H9ITB7   

Pfam

PF00010   HLH

Interpro

IPR036638   HLH_DNA-bd_sf        + More
IPR011598   bHLH_dom       

SUPFAM

SSF47459   SSF47459       

Gene 3D

4.10.280.10    

CDD

cd00083  HLH

ProteinModelPortal

H9ITB7   A0A2A4JBY5   A0A2W1BDT3   A0A194PF85   A0A194QLX0   A0A212EGH8   + More
A0A2H1WTI0   D6WJF3   A0A154PAH5   A0A151IDZ3   A0A0M9A0K0   A0A2A3ENJ1   A0A087ZNU8   A0A310SEN7   A0A195DKW6   A0A151WI36   Q170U3   A0A182QM83   A0A0L7RAL2   A0A182P7D6   A0A026X2C2   A0A1B0EVA7   A0A1A9W3V2   A0A1J1INY0   E0VXD1   A0A1B6CPI0   A0A336LIQ6   A0A182USI8   A0A0C9QVH6   A0A0M3QX57   A0A2R7WEH4   K7IMP3   A0A226EKE1  

KEGG

101736015    no KO assigned | (RefSeq) achaete-scute homolog 3

GO

GO:0046983   GO:0006508   GO:0005515   GO:0008270   GO:0005667   GO:0005737   GO:0003677   GO:0003707   GO:0007169   GO:0016021  

Length:

226

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00542

Exp number, first 60 AAs:

0

Total prob of N-in:

0.09021

outside

1  -  226

 

 

Pi

26.865003

Theta

18.523527

Tajima's D

-1.25566

CLR

0

CSRT

0.0897955102244888

Interpretation

Uncertain